RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 USP28Q96RU2 1077 aa16.07■□□□□ 0.16
EPHB3-201ENST00000330394 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
EPHB3-201ENST00000330394 MCM3P25205 808 aa16.07■□□□□ 0.16
EPHB3-201ENST00000330394 RRAGBQ5VZM2 374 aa16.07■□□□□ 0.16
EPHB3-201ENST00000330394 ZEB2O60315 1214 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 TRIM21P19474 475 aaKnown RBP16.06■□□□□ 0.16
EPHB3-201ENST00000330394 ZSCAN26Q16670 478 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 ALDH1L1O75891 902 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 TOM1L2Q6ZVM7 507 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 TICAM2Q86XR7 235 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 CEP112Q8N8E3 955 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 LRRC59Q96AG4 307 aaKnown RBP16.06■□□□□ 0.16
EPHB3-201ENST00000330394 SEPT11Q9NVA2 429 aaKnown RBP16.06■□□□□ 0.16
EPHB3-201ENST00000330394 USO1O60763 962 aaKnown RBP16.06■□□□□ 0.16
EPHB3-201ENST00000330394 ERLIN2O94905 339 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 ZNF202O95125 648 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 SMC1AQ14683 1233 aaKnown RBP16.06■□□□□ 0.16
EPHB3-201ENST00000330394 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 MAATS1Q7Z4T9 603 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 ATRIPQ8WXE1 791 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 PAG1Q9NWQ8 432 aa16.06■□□□□ 0.16
EPHB3-201ENST00000330394 MYO1BO43795 1136 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 TUBB4AP04350 444 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 ATP2B2Q01814 1243 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 LDHAL6AQ6ZMR3 332 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 DBNDD2Q9BQY9 259 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 MTX1Q13505 466 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 ASXL2Q76L83 1435 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 AKR1B10O60218 316 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 ATF3P18847 181 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 CCT6AP40227 531 aaKnown RBP16.05■□□□□ 0.16
EPHB3-201ENST00000330394 CHMP4BP1P59074 171 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 CERS3Q8IU89 383 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 FTOQ9C0B1 505 aaKnown RBP eCLIP16.05■□□□□ 0.16
EPHB3-201ENST00000330394 MYO6Q9UM54 1294 aa16.05■□□□□ 0.16
EPHB3-201ENST00000330394 RGS12O14924 1447 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 NPATQ14207 1427 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 EBAG9O00559 213 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 DESI2Q9BSY9 194 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 A0A0D9SFI3 127 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 IDEP14735 1019 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 NLRP5P59047 1200 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 UGGT1Q9NYU2 1555 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 ADKP55263 362 aaKnown RBP16.04■□□□□ 0.16
EPHB3-201ENST00000330394 ETF1P62495 437 aaKnown RBP16.04■□□□□ 0.16
EPHB3-201ENST00000330394 NCBP1Q09161 790 aaKnown RBP16.04■□□□□ 0.16
EPHB3-201ENST00000330394 SLC4A8Q2Y0W8 1093 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 CCDC178Q5BJE1 867 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 TRMT44Q8IYL2 757 aaKnown RBP16.04■□□□□ 0.16
EPHB3-201ENST00000330394 TRIM47Q96LD4 638 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
EPHB3-201ENST00000330394 SEC31AO94979 1220 aaKnown RBP16.03■□□□□ 0.16
EPHB3-201ENST00000330394 HDXQ7Z353 690 aa16.03■□□□□ 0.16
EPHB3-201ENST00000330394 NBPF11Q86T75 865 aa16.03■□□□□ 0.16
EPHB3-201ENST00000330394 SEC62Q99442 399 aaKnown RBP16.03■□□□□ 0.16
EPHB3-201ENST00000330394 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.03■□□□□ 0.16
EPHB3-201ENST00000330394 ERVK-7P63135 1459 aa16.02■□□□□ 0.16
EPHB3-201ENST00000330394 GOLGA8FQ08AF8 430 aa16.02■□□□□ 0.16
EPHB3-201ENST00000330394 GOLGA8DPQ0D2H9 430 aa16.02■□□□□ 0.16
EPHB3-201ENST00000330394 IKQ13123 557 aaPredicted RBP16.02■□□□□ 0.16
EPHB3-201ENST00000330394 CCDC96Q2M329 555 aa16.02■□□□□ 0.16
EPHB3-201ENST00000330394 PROSER2Q86WR7 435 aaPredicted RBP16.02■□□□□ 0.16
EPHB3-201ENST00000330394 PHF8Q9UPP1 1060 aa16.02■□□□□ 0.16
EPHB3-201ENST00000330394 NFE2L3Q9Y4A8 694 aa16.02■□□□□ 0.16
EPHB3-201ENST00000330394 GOLGA6L7A0A1B0GV03 622 aa16.02■□□□□ 0.16
EPHB3-201ENST00000330394 IFFO1Q0D2I5 559 aa16.02■□□□□ 0.16
EPHB3-201ENST00000330394 SOGA3Q5TF21 947 aa16.02■□□□□ 0.16
EPHB3-201ENST00000330394 C11orf57Q6ZUT1 292 aaPredicted RBP16.02■□□□□ 0.16
EPHB3-201ENST00000330394 CTCFLQ8NI51 663 aaPredicted RBP16.02■□□□□ 0.16
EPHB3-201ENST00000330394 ZFYVE9O95405 1425 aa16.02■□□□□ 0.16
EPHB3-201ENST00000330394 ANO1Q5XXA6 986 aa16.02■□□□□ 0.15
EPHB3-201ENST00000330394 KCNH5Q8NCM2 988 aa16.02■□□□□ 0.15
EPHB3-201ENST00000330394 CEP170Q5SW79 1584 aa16.02■□□□□ 0.15
EPHB3-201ENST00000330394 UBA7P41226 1012 aa16.02■□□□□ 0.15
EPHB3-201ENST00000330394 MAP3K12Q12852 859 aa16.02■□□□□ 0.15
EPHB3-201ENST00000330394 SLC9C2Q5TAH2 1124 aa16.02■□□□□ 0.15
EPHB3-201ENST00000330394 KANK3Q6NY19 840 aa16.02■□□□□ 0.15
EPHB3-201ENST00000330394 GPIHBP1Q8IV16 184 aa16.02■□□□□ 0.15
EPHB3-201ENST00000330394 TM6SF1Q9BZW5 370 aa16.02■□□□□ 0.15
EPHB3-201ENST00000330394 ZSWIM6Q9HCJ5 1215 aa16.02■□□□□ 0.15
EPHB3-201ENST00000330394 MAPK8IP1Q9UQF2 711 aa16.02■□□□□ 0.15
EPHB3-201ENST00000330394 FBXO38Q6PIJ6 1188 aa16.01■□□□□ 0.15
EPHB3-201ENST00000330394 LSG1Q9H089 658 aaKnown RBP16.01■□□□□ 0.15
EPHB3-201ENST00000330394 LGR6Q9HBX8 967 aa16.01■□□□□ 0.15
EPHB3-201ENST00000330394 CEP57Q86XR8 500 aa16.01■□□□□ 0.15
EPHB3-201ENST00000330394 IGSF22Q8N9C0 903 aa16.01■□□□□ 0.15
EPHB3-201ENST00000330394 SSH3Q8TE77 659 aa16.01■□□□□ 0.15
EPHB3-201ENST00000330394 IQSEC3Q9UPP2 1182 aaPredicted RBP16.01■□□□□ 0.15
EPHB3-201ENST00000330394 ZNF518AQ6AHZ1 1483 aa16.01■□□□□ 0.15
EPHB3-201ENST00000330394 AKR1B15C9JRZ8 316 aaPredicted RBP16.01■□□□□ 0.15
EPHB3-201ENST00000330394 ZBTB22O15209 634 aa16.01■□□□□ 0.15
EPHB3-201ENST00000330394 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
EPHB3-201ENST00000330394 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
EPHB3-201ENST00000330394 MFSD6Q6ZSS7 791 aa16.01■□□□□ 0.15
EPHB3-201ENST00000330394 VPS16Q9H269 839 aa16.01■□□□□ 0.15
EPHB3-201ENST00000330394 GOPCQ9HD26 462 aa16.01■□□□□ 0.15
EPHB3-201ENST00000330394 NEFHP12036 1026 aa16■□□□□ 0.15
EPHB3-201ENST00000330394 USP5P45974 858 aa16■□□□□ 0.15
EPHB3-201ENST00000330394 THEMISQ8N1K5 641 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms