RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 GRIK4Q16099 956 aa3.09□□□□□ -1.92
CCDC144A-201ENST00000328495 MUC3BQ9H195 1237 aa3.09□□□□□ -1.92
CCDC144A-201ENST00000328495 SRA1Q9HD15 236 aaKnown RBP3.09□□□□□ -1.92
CCDC144A-201ENST00000328495 COL17A1Q9UMD9 1497 aaPredicted RBP3.09□□□□□ -1.92
CCDC144A-201ENST00000328495 FAM177BA6PVY3 158 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 CES1P23141 567 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 SERPINB4P48594 390 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 CCER1Q8TC90 406 aaPredicted RBP3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 SNX29Q8TEQ0 813 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 PMEPA1Q969W9 287 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 GGNBP2Q9H3C7 697 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 CYP2E1P05181 493 aaPredicted RBP3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 COL13A1Q5TAT6 717 aaPredicted RBP3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 FBXO11Q86XK2 927 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 MAP4K3Q8IVH8 894 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 IL22RA1Q8N6P7 574 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 KANSL3Q9P2N6 904 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 TRIM33Q9UPN9 1127 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 A6NHS1 94 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 FZD6O60353 706 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 PHACTR2O75167 634 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 ATP11AP98196 1134 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 CEP135Q66GS9 1140 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 LENG1Q96BZ8 264 aaPredicted RBP3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 USP21Q9UK80 565 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 BRPF3Q9ULD4 1205 aa3.08□□□□□ -1.92
CCDC144A-201ENST00000328495 NDUFB5O43674 189 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 TXNDC2Q86VQ3 553 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 GJD3Q8N144 294 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 C1orf127Q8N9H9 656 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 PBX4Q9BYU1 374 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 RASSF4Q9H2L5 321 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 CNTN3Q9P232 1028 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 SELPP16109 830 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 PTPRAP18433 802 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 ADGRE1Q14246 886 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 CEP120Q8N960 986 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 PPME1Q9Y570 386 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 ADAMTSL3P82987 1691 aa3.07□□□□□ -1.92
CCDC144A-201ENST00000328495 K7ELQ4 463 aaPredicted RBP3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 TNFRSF21O75509 655 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 EDN3P14138 238 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 CDC27P30260 824 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 MBTPS1Q14703 1052 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 FAM117BQ6P1L5 589 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 SHISA2Q6UWI4 295 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 TXNRD3Q86VQ6 643 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 LACRTQ9GZZ8 138 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 CCDC87Q9NVE4 849 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 SALL4Q9UJQ4 1053 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 BRD1O95696 1058 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 IGF2-ASQ6U949 168 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 CHRDQ9H2X0 955 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 AMOTL2Q9Y2J4 779 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 LAMC3Q9Y6N6 1575 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 DEAF1O75398 565 aaPredicted RBP3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 NEFLP07196 543 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 CABP4P57796 275 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 PDE3BQ13370 1112 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 SLC51AQ86UW1 340 aa3.06□□□□□ -1.92
CCDC144A-201ENST00000328495 DLL1O00548 723 aa3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 FURINP09958 794 aa3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 DOC2BQ14184 412 aa3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 MRPL18Q9H0U6 180 aaKnown RBP3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 FOXD3Q9UJU5 478 aaPredicted RBP3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 PDE2AO00408 941 aaPredicted RBP3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 EREGO14944 169 aa3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 ADAM23O75077 832 aa3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 ARHGAP4P98171 946 aa3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 SETDB1Q15047 1291 aa3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 CITED4Q96RK1 184 aa3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 DZANK1Q9NVP4 752 aa3.05□□□□□ -1.92
CCDC144A-201ENST00000328495 LINC01387J3KSC0 135 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 SUZ12Q15022 739 aaKnown RBP3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 POP1Q99575 1024 aaKnown RBP3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 OSMRQ99650 979 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 ADAM19Q9H013 955 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 TPSG1Q9NRR2 321 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 GNEQ9Y223 722 aaKnown RBP3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 H3BRJ5 948 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 ACPPP15309 386 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 TMEM102Q8N9M5 508 aaPredicted RBP3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 KLHL23Q8NBE8 558 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 WNT8BQ93098 351 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 ZFYVE28Q9HCC9 887 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 SOWAHDA6NJG2 315 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 EPHA1P21709 976 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 ECM1Q16610 540 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 TXNDC11Q6PKC3 985 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 TMC1Q8TDI8 760 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 WFDC12Q8WWY7 111 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 SH2B1Q9NRF2 756 aaPredicted RBP3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 MYO15BQ96JP2 1530 aa3.04□□□□□ -1.92
CCDC144A-201ENST00000328495 FSCN2O14926 492 aa3.03□□□□□ -1.92
CCDC144A-201ENST00000328495 CDC25BP30305 580 aa3.03□□□□□ -1.92
CCDC144A-201ENST00000328495 PIP4K2BP78356 416 aa3.03□□□□□ -1.92
CCDC144A-201ENST00000328495 FAM129BQ96TA1 746 aa3.03□□□□□ -1.92
CCDC144A-201ENST00000328495 ZKSCAN3Q9BRR0 538 aa3.03□□□□□ -1.92
CCDC144A-201ENST00000328495 AKTIPQ9H8T0 292 aa3.03□□□□□ -1.92
CCDC144A-201ENST00000328495 SEC31BQ9NQW1 1179 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms