RNA–Protein interactions for RNA: ENST00000325752.7

TUBD1-201, Transcript of tubulin delta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TUBD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-201ENST00000325752 CNNM1Q9NRU3 951 aa13.72□□□□□ -0.21
TUBD1-201ENST00000325752 TRMT112Q9UI30 125 aaKnown RBP13.72□□□□□ -0.21
TUBD1-201ENST00000325752 HMGB1P09429 215 aaKnown RBP13.72□□□□□ -0.21
TUBD1-201ENST00000325752 NLRP10Q86W26 655 aa13.72□□□□□ -0.21
TUBD1-201ENST00000325752 RAB11FIP4Q86YS3 637 aa13.72□□□□□ -0.21
TUBD1-201ENST00000325752 SCAND2PQ9GZW5 306 aaPredicted RBP13.72□□□□□ -0.21
TUBD1-201ENST00000325752 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
TUBD1-201ENST00000325752 TAOK2Q9UL54 1235 aa13.72□□□□□ -0.21
TUBD1-201ENST00000325752 PTPDC1A2A3K4 754 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 CTDNEP1O95476 244 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 NSUN7Q8NE18 718 aaKnown RBP13.71□□□□□ -0.21
TUBD1-201ENST00000325752 TTLL11Q8NHH1 800 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 BICD2Q8TD16 824 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 FTOQ9C0B1 505 aaKnown RBP eCLIP13.71□□□□□ -0.21
TUBD1-201ENST00000325752 TJP1Q07157 1748 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 KDM4FA0A1W2PPD8 638 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 IRS4O14654 1257 aaPredicted RBP13.71□□□□□ -0.21
TUBD1-201ENST00000325752 PFKFB2O60825 505 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 CSF1RP07333 972 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 EXOSC10Q01780 885 aaKnown RBP13.71□□□□□ -0.21
TUBD1-201ENST00000325752 TRIM28Q13263 835 aaKnown RBP13.71□□□□□ -0.21
TUBD1-201ENST00000325752 ATP2B3Q16720 1220 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 VSIG10Q8N0Z9 540 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 FUCA2Q9BTY2 467 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 NUP62CLQ9H1M0 184 aa13.71□□□□□ -0.21
TUBD1-201ENST00000325752 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.22
TUBD1-201ENST00000325752 NUP188Q5SRE5 1749 aa13.7□□□□□ -0.22
TUBD1-201ENST00000325752 FGAP02671 866 aa13.7□□□□□ -0.22
TUBD1-201ENST00000325752 CYP19A1P11511 503 aaPredicted RBP13.7□□□□□ -0.22
TUBD1-201ENST00000325752 PDIA4P13667 645 aaKnown RBP13.7□□□□□ -0.22
TUBD1-201ENST00000325752 HELBQ8NG08 1087 aaPredicted RBP13.7□□□□□ -0.22
TUBD1-201ENST00000325752 EXOC5O00471 708 aa13.7□□□□□ -0.22
TUBD1-201ENST00000325752 NR1I2O75469 434 aa13.7□□□□□ -0.22
TUBD1-201ENST00000325752 MCAMP43121 646 aa13.7□□□□□ -0.22
TUBD1-201ENST00000325752 RESTQ13127 1097 aa13.7□□□□□ -0.22
TUBD1-201ENST00000325752 PGBD1Q96JS3 809 aa13.7□□□□□ -0.22
TUBD1-201ENST00000325752 TNMDQ9H2S6 317 aa13.7□□□□□ -0.22
TUBD1-201ENST00000325752 FOXP2O15409 715 aa13.69□□□□□ -0.22
TUBD1-201ENST00000325752 CCDC192P0DO97 292 aa13.69□□□□□ -0.22
TUBD1-201ENST00000325752 PDIA3P30101 505 aaKnown RBP13.69□□□□□ -0.22
TUBD1-201ENST00000325752 MAP3K11Q16584 847 aa13.69□□□□□ -0.22
TUBD1-201ENST00000325752 UVSSAQ2YD98 709 aa13.69□□□□□ -0.22
TUBD1-201ENST00000325752 RIPOR2Q9Y4F9 1068 aa13.69□□□□□ -0.22
TUBD1-201ENST00000325752 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.69□□□□□ -0.22
TUBD1-201ENST00000325752 ELP1O95163 1332 aa13.69□□□□□ -0.22
TUBD1-201ENST00000325752 ANKRD18BA2A2Z9 1011 aa13.69□□□□□ -0.22
TUBD1-201ENST00000325752 SNAP23O00161 211 aa13.69□□□□□ -0.22
TUBD1-201ENST00000325752 KDM4AO75164 1064 aa13.69□□□□□ -0.22
TUBD1-201ENST00000325752 CTSWP56202 376 aa13.69□□□□□ -0.22
TUBD1-201ENST00000325752 DZIP3Q86Y13 1208 aaKnown RBP13.69□□□□□ -0.22
TUBD1-201ENST00000325752 SMARCC2Q8TAQ2 1214 aa13.69□□□□□ -0.22
TUBD1-201ENST00000325752 R3HCC1Q9Y3T6 440 aaKnown RBP13.69□□□□□ -0.22
TUBD1-201ENST00000325752 AP5Z1O43299 807 aa13.68□□□□□ -0.22
TUBD1-201ENST00000325752 IDH1O75874 414 aaKnown RBP13.68□□□□□ -0.22
TUBD1-201ENST00000325752 IMMTQ16891 758 aaKnown RBP13.68□□□□□ -0.22
TUBD1-201ENST00000325752 TTC12Q9H892 705 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-201ENST00000325752 TOGARAM1Q9Y4F4 1720 aa13.68□□□□□ -0.22
TUBD1-201ENST00000325752 GPAA1O43292 621 aa13.68□□□□□ -0.22
TUBD1-201ENST00000325752 OFD1O75665 1012 aa13.68□□□□□ -0.22
TUBD1-201ENST00000325752 LRRFIP1Q32MZ4 808 aaKnown RBP13.68□□□□□ -0.22
TUBD1-201ENST00000325752 SLC9C2Q5TAH2 1124 aa13.68□□□□□ -0.22
TUBD1-201ENST00000325752 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.68□□□□□ -0.22
TUBD1-201ENST00000325752 ACSBG1Q96GR2 724 aa13.68□□□□□ -0.22
TUBD1-201ENST00000325752 PLA2G12BQ9BX93 195 aa13.68□□□□□ -0.22
TUBD1-201ENST00000325752 SHANK3Q9BYB0 1731 aa13.68□□□□□ -0.22
TUBD1-201ENST00000325752 ZNF500O60304 480 aaPredicted RBP13.67□□□□□ -0.22
TUBD1-201ENST00000325752 APPP05067 770 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 GLIPR1L2Q4G1C9 344 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 OTUD7BQ6GQQ9 843 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 APPBP2Q92624 585 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 DENND2AQ9ULE3 1009 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 ADAMTS2O95450 1211 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 TYRO3Q06418 890 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 LUZP1Q86V48 1076 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 SPC24Q8NBT2 197 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 LLPHQ9BRT6 129 aaKnown RBP13.67□□□□□ -0.22
TUBD1-201ENST00000325752 ZSCAN16Q9H4T2 348 aaPredicted RBP13.67□□□□□ -0.22
TUBD1-201ENST00000325752 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 PAPPAQ13219 1627 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 STRCQ7RTU9 1775 aa13.67□□□□□ -0.22
TUBD1-201ENST00000325752 ZFYP08048 801 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-201ENST00000325752 PDE4CQ08493 712 aa13.66□□□□□ -0.22
TUBD1-201ENST00000325752 UBN2Q6ZU65 1347 aa13.66□□□□□ -0.22
TUBD1-201ENST00000325752 AGXT2Q9BYV1 514 aa13.66□□□□□ -0.22
TUBD1-201ENST00000325752 CTNNA3Q9UI47 895 aa13.66□□□□□ -0.22
TUBD1-201ENST00000325752 ZNF213O14771 459 aa13.66□□□□□ -0.22
TUBD1-201ENST00000325752 PRC1O43663 620 aa13.66□□□□□ -0.22
TUBD1-201ENST00000325752 PHKA1P46020 1223 aa13.66□□□□□ -0.22
TUBD1-201ENST00000325752 HMGN5P82970 282 aaKnown RBP13.66□□□□□ -0.22
TUBD1-201ENST00000325752 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-201ENST00000325752 C17orf53Q8N3J3 647 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-201ENST00000325752 CFAP45Q9UL16 551 aa13.66□□□□□ -0.22
TUBD1-201ENST00000325752 MRVI1Q9Y6F6 885 aa13.66□□□□□ -0.22
TUBD1-201ENST00000325752 BCL9O00512 1426 aa13.65□□□□□ -0.22
TUBD1-201ENST00000325752 RIC1Q4ADV7 1423 aa13.65□□□□□ -0.22
TUBD1-201ENST00000325752 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
TUBD1-201ENST00000325752 ANO6Q4KMQ2 910 aa13.65□□□□□ -0.22
TUBD1-201ENST00000325752 RALYLQ86SE5 291 aaKnown RBP13.65□□□□□ -0.22
TUBD1-201ENST00000325752 USP28Q96RU2 1077 aa13.65□□□□□ -0.22
TUBD1-201ENST00000325752 GJB4Q9NTQ9 266 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms