RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 RAD50Q92878 1312 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 KRT13P13646 458 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 NPHP4O75161 1426 aaPredicted RBP10.27□□□□□ -0.77
CD28-201ENST00000324106 ERBB4Q15303 1308 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 CAVIN2O95810 425 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 PDE1AP54750 535 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 ABCA8O94911 1581 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 DISP1Q96F81 1524 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 PPIP5K2O43314 1243 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 ITGA6P23229 1130 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 CWF19L2Q2TBE0 894 aaKnown RBP10.26□□□□□ -0.77
CD28-201ENST00000324106 CCDC144CPQ8IYA2 1237 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 MAGEB6Q8N7X4 407 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 SFPQP23246 707 aaKnown RBP eCLIP10.26□□□□□ -0.77
CD28-201ENST00000324106 FSIP1Q8NA03 581 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 KIF2AO00139 706 aaPredicted RBP10.26□□□□□ -0.77
CD28-201ENST00000324106 KRT79Q5XKE5 535 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 FILIP1Q7Z7B0 1213 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 TESK2Q96S53 571 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 CSADQ9Y600 493 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 MAGI3Q5TCQ9 1506 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 PHACTR2O75167 634 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 HCLS1P14317 486 aaPredicted RBP10.26□□□□□ -0.77
CD28-201ENST00000324106 DCAF15Q66K64 600 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 HOOK3Q86VS8 718 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 EXOC1Q9NV70 894 aa10.26□□□□□ -0.77
CD28-201ENST00000324106 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.26□□□□□ -0.77
CD28-201ENST00000324106 VAMP4O75379 141 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 YEATS4O95619 227 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 LTKP29376 864 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 PABPC4Q13310 644 aaKnown RBP eCLIP10.25□□□□□ -0.77
CD28-201ENST00000324106 KIF22Q14807 665 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 TDRD12Q587J7 1177 aaKnown RBP10.25□□□□□ -0.77
CD28-201ENST00000324106 SPC24Q8NBT2 197 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 CCDC112Q8NEF3 446 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 ALG1Q9BT22 464 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 REREQ9P2R6 1566 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 BACH1O14867 736 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 CTNNA2P26232 953 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 RPS8P62241 208 aaKnown RBP10.25□□□□□ -0.77
CD28-201ENST00000324106 AXDND1Q5T1B0 1012 aaPredicted RBP10.25□□□□□ -0.77
CD28-201ENST00000324106 LPIN2Q92539 896 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 SPC25Q9HBM1 224 aa10.25□□□□□ -0.77
CD28-201ENST00000324106 RBM28Q9NW13 759 aaKnown RBP10.25□□□□□ -0.77
CD28-201ENST00000324106 RBM8AQ9Y5S9 174 aaKnown RBP10.25□□□□□ -0.77
CD28-201ENST00000324106 PATL2C9JE40 543 aaKnown RBP10.24□□□□□ -0.77
CD28-201ENST00000324106 ZSCAN12O43309 604 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 PRC1O43663 620 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 LRSAM1Q6UWE0 723 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 HS2ST1Q7LGA3 356 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 TMC4Q7Z404 712 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 PLVAPQ9BX97 442 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 RSPH6AQ9H0K4 717 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 PNMA2Q9UL42 364 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 USP8P40818 1118 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 CCDC183Q5T5S1 534 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 OTUD7BQ6GQQ9 843 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 KCNG4Q8TDN1 519 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 NPC1L1Q9UHC9 1359 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 MROH5Q6ZUA9 1318 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 TRIM75PA6NK02 468 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 PARP1P09874 1014 aaKnown RBP10.24□□□□□ -0.77
CD28-201ENST00000324106 ACTN2P35609 894 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 SPAG1Q07617 926 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 TBC1D9Q6ZT07 1266 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 CARD10Q9BWT7 1032 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 PTPRKQ15262 1439 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 PLEKHG1Q9ULL1 1385 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 IRX3P78415 501 aaPredicted RBP10.24□□□□□ -0.77
CD28-201ENST00000324106 TAF12Q16514 161 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 MIGA1Q8NAN2 632 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 ABCA9Q8IUA7 1624 aa10.24□□□□□ -0.77
CD28-201ENST00000324106 PABPN1LA6NDY0 278 aaKnown RBP10.23□□□□□ -0.77
CD28-201ENST00000324106 TOP1P11387 765 aaKnown RBP10.23□□□□□ -0.77
CD28-201ENST00000324106 PRKCSHP14314 528 aaPredicted RBP10.23□□□□□ -0.77
CD28-201ENST00000324106 RAB3GAP1Q15042 981 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 KRT27Q7Z3Y8 459 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 ZBED4O75132 1171 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 A1BGP04217 495 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 AS3MTQ9HBK9 375 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 MAST1Q9Y2H9 1570 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 GJB2P29033 226 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 MCM4P33991 863 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 NUCB1Q02818 461 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 TFCP2Q12800 502 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 PUF60Q9UHX1 559 aaKnown RBP10.23□□□□□ -0.77
CD28-201ENST00000324106 PA2G4Q9UQ80 394 aaKnown RBP10.23□□□□□ -0.77
CD28-201ENST00000324106 EIF3JO75822 258 aaKnown RBP10.23□□□□□ -0.77
CD28-201ENST00000324106 ATP2B4P23634 1241 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 ARHGAP27Q6ZUM4 889 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 MTERF4Q7Z6M4 381 aaKnown RBP10.23□□□□□ -0.77
CD28-201ENST00000324106 SMCR8Q8TEV9 937 aaPredicted RBP10.23□□□□□ -0.77
CD28-201ENST00000324106 HELLSQ9NRZ9 838 aa10.23□□□□□ -0.77
CD28-201ENST00000324106 IL13P35225 146 aa10.22□□□□□ -0.77
CD28-201ENST00000324106 STAT6P42226 847 aa10.22□□□□□ -0.77
CD28-201ENST00000324106 PAFAH1B1P43034 410 aa10.22□□□□□ -0.77
CD28-201ENST00000324106 EAPPQ56P03 285 aaPredicted RBP10.22□□□□□ -0.77
CD28-201ENST00000324106 CCDC117Q8IWD4 279 aaPredicted RBP10.22□□□□□ -0.77
CD28-201ENST00000324106 SULF1Q8IWU6 871 aa10.22□□□□□ -0.77
CD28-201ENST00000324106 MSANTD4Q8NCY6 345 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms