RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PPP1R14CQ8TAE6 165 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 ZPR1O75312 459 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 SH3GL3Q99963 347 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 CNNM2Q9H8M5 875 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 NBPF7P0C2Y1 421 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-201ENST00000322507 KCNG4Q8TDN1 519 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 JAKMIP2Q96AA8 810 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 LDHCP07864 332 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 ARHGAP45Q92619 1136 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 PALM2Q8IXS6 379 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 RPGRIP1Q96KN7 1286 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 ANKRD36BQ8N2N9 1353 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 RBM5P52756 815 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL12A1-201ENST00000322507 GSTO1P78417 241 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 FAM76AQ8TAV0 307 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 HOMER2Q9NSB8 354 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 RAPGEF6Q8TEU7 1601 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 PIP4K2BP78356 416 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 PAWRQ96IZ0 340 aaKnown RBP10.98□□□□□ -0.65
COL12A1-201ENST00000322507 PLCB1Q9NQ66 1216 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 TBC1D5Q92609 795 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 NCAPGQ9BPX3 1015 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 C1orf115Q9H7X2 142 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 USP5P45974 858 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 ATL3Q6DD88 541 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 SELENOOQ9BVL4 669 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 CTNNA2P26232 953 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 KRBA2Q6ZNG9 492 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 TSR2Q969E8 191 aaKnown RBP10.97□□□□□ -0.65
COL12A1-201ENST00000322507 ATP2A1O14983 1001 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 TBC1D10BQ4KMP7 808 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-201ENST00000322507 DUOX2Q9NRD8 1548 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 NOP14P78316 857 aaKnown RBP10.97□□□□□ -0.65
COL12A1-201ENST00000322507 DYNC1I2Q13409 638 aaKnown RBP10.97□□□□□ -0.65
COL12A1-201ENST00000322507 FAM177A1Q8N128 213 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-201ENST00000322507 FRMD4BQ9Y2L6 1034 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 IDH1O75874 414 aaKnown RBP10.97□□□□□ -0.65
COL12A1-201ENST00000322507 CDCA7LQ96GN5 454 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 A0A1W2PRG0 241 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 SYF2O95926 243 aaKnown RBP10.97□□□□□ -0.65
COL12A1-201ENST00000322507 GNAQP50148 359 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 KLHL40Q2TBA0 621 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 VPS41P49754 854 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 TERF1P54274 439 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 ZSCAN29Q8IWY8 852 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-201ENST00000322507 GFM2Q969S9 779 aaKnown RBP10.97□□□□□ -0.65
COL12A1-201ENST00000322507 SIL1Q9H173 461 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 MRFAP1Q9Y605 127 aa10.97□□□□□ -0.65
COL12A1-201ENST00000322507 PABPN1LA6NDY0 278 aaKnown RBP10.96□□□□□ -0.65
COL12A1-201ENST00000322507 PRC1O43663 620 aa10.96□□□□□ -0.65
COL12A1-201ENST00000322507 CDC5LQ99459 802 aaKnown RBP10.96□□□□□ -0.65
COL12A1-201ENST00000322507 SLC12A5Q9H2X9 1139 aa10.96□□□□□ -0.65
COL12A1-201ENST00000322507 MTMR7Q9Y216 660 aa10.96□□□□□ -0.65
COL12A1-201ENST00000322507 ZBTB16Q05516 673 aa10.96□□□□□ -0.65
COL12A1-201ENST00000322507 FLOT2Q14254 428 aa10.96□□□□□ -0.65
COL12A1-201ENST00000322507 LMBR1Q8WVP7 490 aa10.96□□□□□ -0.65
COL12A1-201ENST00000322507 NAP1L4Q99733 375 aaKnown RBP10.96□□□□□ -0.65
COL12A1-201ENST00000322507 B4DLN1 442 aa10.96□□□□□ -0.65
COL12A1-201ENST00000322507 MRPL12P52815 198 aaKnown RBP10.96□□□□□ -0.65
COL12A1-201ENST00000322507 GJC2Q5T442 439 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-201ENST00000322507 IQCGQ9H095 443 aaKnown RBP10.96□□□□□ -0.65
COL12A1-201ENST00000322507 MYL6BP14649 208 aa10.96□□□□□ -0.65
COL12A1-201ENST00000322507 ZNF444Q8N0Y2 327 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-201ENST00000322507 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-201ENST00000322507 KRT23Q9C075 422 aa10.96□□□□□ -0.65
COL12A1-201ENST00000322507 USP25Q9UHP3 1055 aa10.96□□□□□ -0.65
COL12A1-201ENST00000322507 ZNF131P52739 623 aa10.96□□□□□ -0.66
COL12A1-201ENST00000322507 PPP1R12AO14974 1030 aaPredicted RBP10.96□□□□□ -0.66
COL12A1-201ENST00000322507 NEDD9Q14511 834 aa10.96□□□□□ -0.66
COL12A1-201ENST00000322507 MICAL1Q8TDZ2 1067 aa10.96□□□□□ -0.66
COL12A1-201ENST00000322507 CCDC77Q9BR77 488 aa10.96□□□□□ -0.66
COL12A1-201ENST00000322507 TMOD3Q9NYL9 352 aa10.96□□□□□ -0.66
COL12A1-201ENST00000322507 ADGRL1O94910 1474 aa10.96□□□□□ -0.66
COL12A1-201ENST00000322507 BCAR3O75815 825 aa10.96□□□□□ -0.66
COL12A1-201ENST00000322507 CCDC102BQ68D86 513 aa10.96□□□□□ -0.66
COL12A1-201ENST00000322507 CCDC170Q8IYT3 715 aa10.96□□□□□ -0.66
COL12A1-201ENST00000322507 ATP5DP30049 168 aa10.96□□□□□ -0.66
COL12A1-201ENST00000322507 CRACR2BQ8N4Y2 399 aaPredicted RBP10.96□□□□□ -0.66
COL12A1-201ENST00000322507 PPP1R2P41236 205 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 DUSP27Q5VZP5 1158 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 PPP1R12CQ9BZL4 782 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 SMIM24O75264 130 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 SCINQ9Y6U3 715 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 GOLGA8BA8MQT2 603 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 IWS1Q96ST2 819 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 RASSF2P50749 326 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 KIAA1524Q8TCG1 905 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 GOLGA1Q92805 767 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 CYLC1P35663 651 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-201ENST00000322507 SNW1Q13573 536 aaKnown RBP10.95□□□□□ -0.66
COL12A1-201ENST00000322507 MYSM1Q5VVJ2 828 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 PPP1R21Q6ZMI0 780 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 HDXQ7Z353 690 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 FERMT2Q96AC1 680 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 SKOR1P84550 965 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 KIF1BO60333 1816 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 LMNAP02545 664 aaKnown RBP10.95□□□□□ -0.66
COL12A1-201ENST00000322507 CLUL1Q15846 466 aa10.95□□□□□ -0.66
COL12A1-201ENST00000322507 STX6O43752 255 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 GIGYF1O75420 1035 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms