RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 SLC4A9Q96Q91 983 aa24.43■■□□□ 1.5
CPNE7-202ENST00000319518 DISP2A7MBM2 1401 aa24.43■■□□□ 1.5
CPNE7-202ENST00000319518 LRMPQ12912 555 aa24.43■■□□□ 1.5
CPNE7-202ENST00000319518 CCDC186Q7Z3E2 898 aa24.43■■□□□ 1.5
CPNE7-202ENST00000319518 DNAJC25Q9H1X3 360 aa24.43■■□□□ 1.5
CPNE7-202ENST00000319518 COL16A1Q07092 1604 aaPredicted RBP24.43■■□□□ 1.5
CPNE7-202ENST00000319518 HSP90B1P14625 803 aaKnown RBP24.42■■□□□ 1.5
CPNE7-202ENST00000319518 CCDC191Q8NCU4 936 aa24.42■■□□□ 1.5
CPNE7-202ENST00000319518 ITGB4P16144 1822 aa24.42■■□□□ 1.5
CPNE7-202ENST00000319518 A0A0G2JLW4 131 aa24.42■■□□□ 1.5
CPNE7-202ENST00000319518 CTDNEP1O95476 244 aa24.42■■□□□ 1.5
CPNE7-202ENST00000319518 CCDC85AQ96PX6 553 aaPredicted RBP24.42■■□□□ 1.5
CPNE7-202ENST00000319518 FTOQ9C0B1 505 aaKnown RBP eCLIP24.42■■□□□ 1.5
CPNE7-202ENST00000319518 KIF3AQ9Y496 699 aa24.42■■□□□ 1.5
CPNE7-202ENST00000319518 COL14A1Q05707 1796 aaKnown RBP24.41■■□□□ 1.5
CPNE7-202ENST00000319518 LAMA4Q16363 1823 aa24.41■■□□□ 1.5
CPNE7-202ENST00000319518 ZNF75DP51815 510 aa24.41■■□□□ 1.5
CPNE7-202ENST00000319518 ATG9AQ7Z3C6 839 aa24.41■■□□□ 1.5
CPNE7-202ENST00000319518 LRRC24Q50LG9 513 aa24.41■■□□□ 1.5
CPNE7-202ENST00000319518 KBTBD3Q8NAB2 608 aa24.41■■□□□ 1.5
CPNE7-202ENST00000319518 H3BQV1 296 aa24.4■■□□□ 1.5
CPNE7-202ENST00000319518 RIOK3O14730 519 aaKnown RBP24.4■■□□□ 1.5
CPNE7-202ENST00000319518 ZNF165P49910 485 aa24.4■■□□□ 1.5
CPNE7-202ENST00000319518 IFFO2Q5TF58 517 aa24.4■■□□□ 1.5
CPNE7-202ENST00000319518 NSUN7Q8NE18 718 aaKnown RBP24.4■■□□□ 1.5
CPNE7-202ENST00000319518 SH3TC1Q8TE82 1336 aa24.4■■□□□ 1.5
CPNE7-202ENST00000319518 BCL2L12Q9HB09 334 aa24.4■■□□□ 1.5
CPNE7-202ENST00000319518 PFKFB2O60825 505 aa24.4■■□□□ 1.5
CPNE7-202ENST00000319518 CEBPZQ03701 1054 aaKnown RBP24.4■■□□□ 1.5
CPNE7-202ENST00000319518 EXOC5O00471 708 aa24.39■■□□□ 1.5
CPNE7-202ENST00000319518 SYNE4Q8N205 404 aa24.39■■□□□ 1.5
CPNE7-202ENST00000319518 ISCA1Q9BUE6 129 aa24.39■■□□□ 1.5
CPNE7-202ENST00000319518 TCIRG1Q13488 830 aa24.39■■□□□ 1.49
CPNE7-202ENST00000319518 FAM89AQ96GI7 184 aa24.39■■□□□ 1.49
CPNE7-202ENST00000319518 PUS3Q9BZE2 481 aaKnown RBP24.39■■□□□ 1.49
CPNE7-202ENST00000319518 TRIM5Q9C035 493 aa24.39■■□□□ 1.49
CPNE7-202ENST00000319518 ZSCAN16Q9H4T2 348 aaPredicted RBP24.39■■□□□ 1.49
CPNE7-202ENST00000319518 A0A0G2JS52 829 aa24.38■■□□□ 1.49
CPNE7-202ENST00000319518 FOSBP53539 338 aa24.38■■□□□ 1.49
CPNE7-202ENST00000319518 TIMM10P62072 90 aa24.38■■□□□ 1.49
CPNE7-202ENST00000319518 NEUROD6Q96NK8 337 aa24.38■■□□□ 1.49
CPNE7-202ENST00000319518 CCDC94Q9BW85 323 aaPredicted RBP24.38■■□□□ 1.49
CPNE7-202ENST00000319518 APOBRQ0VD83 1088 aa24.37■■□□□ 1.49
CPNE7-202ENST00000319518 HLFQ16534 295 aa24.37■■□□□ 1.49
CPNE7-202ENST00000319518 STARD3NLO95772 234 aa24.37■■□□□ 1.49
CPNE7-202ENST00000319518 GOLPH3LQ9H4A5 285 aa24.37■■□□□ 1.49
CPNE7-202ENST00000319518 BCL9O00512 1426 aa24.37■■□□□ 1.49
CPNE7-202ENST00000319518 PALLDQ8WX93 1383 aa24.37■■□□□ 1.49
CPNE7-202ENST00000319518 GOLIM4O00461 696 aa24.36■■□□□ 1.49
CPNE7-202ENST00000319518 GPTP24298 496 aa24.36■■□□□ 1.49
CPNE7-202ENST00000319518 EXOSC10Q01780 885 aaKnown RBP24.36■■□□□ 1.49
CPNE7-202ENST00000319518 DHX32Q7L7V1 743 aaKnown RBP24.36■■□□□ 1.49
CPNE7-202ENST00000319518 PPFIA3O75145 1194 aa24.36■■□□□ 1.49
CPNE7-202ENST00000319518 IQCB1Q15051 598 aa24.36■■□□□ 1.49
CPNE7-202ENST00000319518 ZSCAN25Q6NSZ9 544 aa24.36■■□□□ 1.49
CPNE7-202ENST00000319518 KIF6Q6ZMV9 814 aa24.36■■□□□ 1.49
CPNE7-202ENST00000319518 PKNOX2Q96KN3 472 aa24.36■■□□□ 1.49
CPNE7-202ENST00000319518 LLPHQ9BRT6 129 aaKnown RBP24.36■■□□□ 1.49
CPNE7-202ENST00000319518 AGXT2Q9BYV1 514 aa24.36■■□□□ 1.49
CPNE7-202ENST00000319518 CCDC144BQ3MJ40 725 aa24.35■■□□□ 1.49
CPNE7-202ENST00000319518 C11orf57Q6ZUT1 292 aaPredicted RBP24.35■■□□□ 1.49
CPNE7-202ENST00000319518 CCDC144CPQ8IYA2 1237 aa24.35■■□□□ 1.49
CPNE7-202ENST00000319518 CFAP45Q9UL16 551 aa24.35■■□□□ 1.49
CPNE7-202ENST00000319518 MYH15Q9Y2K3 1946 aa24.35■■□□□ 1.49
CPNE7-202ENST00000319518 AHDC1Q5TGY3 1603 aaPredicted RBP24.35■■□□□ 1.49
CPNE7-202ENST00000319518 PTPDC1A2A3K4 754 aa24.35■■□□□ 1.49
CPNE7-202ENST00000319518 NUTM2BA6NNL0 878 aaPredicted RBP24.35■■□□□ 1.49
CPNE7-202ENST00000319518 NUTM2EB1AL46 878 aaPredicted RBP24.35■■□□□ 1.49
CPNE7-202ENST00000319518 NUTM2AQ8IVF1 878 aaPredicted RBP24.35■■□□□ 1.49
CPNE7-202ENST00000319518 NCOA5Q9HCD5 579 aaKnown RBP24.35■■□□□ 1.49
CPNE7-202ENST00000319518 RCOR1Q9UKL0 485 aa24.35■■□□□ 1.49
CPNE7-202ENST00000319518 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.34■■□□□ 1.49
CPNE7-202ENST00000319518 DRC7Q8IY82 874 aa24.34■■□□□ 1.49
CPNE7-202ENST00000319518 TEX13AQ9BXU3 409 aaPredicted RBP24.34■■□□□ 1.49
CPNE7-202ENST00000319518 PAG1Q9NWQ8 432 aa24.34■■□□□ 1.49
CPNE7-202ENST00000319518 ZBTB1Q9Y2K1 713 aa24.34■■□□□ 1.49
CPNE7-202ENST00000319518 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.34■■□□□ 1.49
CPNE7-202ENST00000319518 SALL1Q9NSC2 1324 aa24.34■■□□□ 1.49
CPNE7-202ENST00000319518 CYP19A1P11511 503 aaPredicted RBP24.34■■□□□ 1.49
CPNE7-202ENST00000319518 CCT2P78371 535 aaKnown RBP24.34■■□□□ 1.49
CPNE7-202ENST00000319518 FGD1P98174 961 aa24.34■■□□□ 1.49
CPNE7-202ENST00000319518 SNW1Q13573 536 aaKnown RBP24.34■■□□□ 1.49
CPNE7-202ENST00000319518 NAA16Q6N069 864 aaPredicted RBP24.34■■□□□ 1.49
CPNE7-202ENST00000319518 USP28Q96RU2 1077 aa24.34■■□□□ 1.49
CPNE7-202ENST00000319518 ILDR1Q86SU0 546 aaPredicted RBP24.33■■□□□ 1.49
CPNE7-202ENST00000319518 CACTINQ8WUQ7 758 aaKnown RBP24.33■■□□□ 1.49
CPNE7-202ENST00000319518 DSCC1Q9BVC3 393 aa24.33■■□□□ 1.49
CPNE7-202ENST00000319518 A0A087WWV3 80 aa24.33■■□□□ 1.48
CPNE7-202ENST00000319518 ZMYM1Q5SVZ6 1142 aa24.33■■□□□ 1.48
CPNE7-202ENST00000319518 COL22A1Q8NFW1 1626 aaPredicted RBP24.32■■□□□ 1.48
CPNE7-202ENST00000319518 EYA2O00167 538 aa24.32■■□□□ 1.48
CPNE7-202ENST00000319518 CTIFO43310 598 aaKnown RBP24.32■■□□□ 1.48
CPNE7-202ENST00000319518 HMGB1P09429 215 aaKnown RBP24.32■■□□□ 1.48
CPNE7-202ENST00000319518 CCAR1Q8IX12 1150 aaKnown RBP24.32■■□□□ 1.48
CPNE7-202ENST00000319518 HELLSQ9NRZ9 838 aa24.32■■□□□ 1.48
CPNE7-202ENST00000319518 E7EWF7 191 aa24.32■■□□□ 1.48
CPNE7-202ENST00000319518 HSPD1P10809 573 aaKnown RBP24.32■■□□□ 1.48
CPNE7-202ENST00000319518 ACSBG1Q96GR2 724 aa24.32■■□□□ 1.48
CPNE7-202ENST00000319518 CLIP2Q9UDT6 1046 aa24.32■■□□□ 1.48
CPNE7-202ENST00000319518 MAP3K15Q6ZN16 1313 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms