RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CARD6Q9BX69 1037 aa11.25□□□□□ -0.61
PTPRA-202ENST00000318266 NRKQ7Z2Y5 1582 aa11.25□□□□□ -0.61
PTPRA-202ENST00000318266 PTPDC1A2A3K4 754 aa11.25□□□□□ -0.61
PTPRA-202ENST00000318266 CTAGE5O15320 804 aa11.25□□□□□ -0.61
PTPRA-202ENST00000318266 TAF5LO75529 589 aa11.25□□□□□ -0.61
PTPRA-202ENST00000318266 HSP90AA4PQ58FG1 418 aa11.25□□□□□ -0.61
PTPRA-202ENST00000318266 MEX3CQ5U5Q3 659 aaKnown RBP11.25□□□□□ -0.61
PTPRA-202ENST00000318266 NGLY1Q96IV0 654 aa11.25□□□□□ -0.61
PTPRA-202ENST00000318266 NAT10Q9H0A0 1025 aaKnown RBP11.25□□□□□ -0.61
PTPRA-202ENST00000318266 ZSCAN16Q9H4T2 348 aaPredicted RBP11.25□□□□□ -0.61
PTPRA-202ENST00000318266 BICC1Q9H694 974 aaKnown RBP11.25□□□□□ -0.61
PTPRA-202ENST00000318266 ROBO2Q9HCK4 1378 aa11.25□□□□□ -0.61
PTPRA-202ENST00000318266 PRAMEF22A3QJZ6 481 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 HIP1O00291 1037 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 PDIA4P13667 645 aaKnown RBP11.24□□□□□ -0.61
PTPRA-202ENST00000318266 SF3A1Q15459 793 aaKnown RBP11.24□□□□□ -0.61
PTPRA-202ENST00000318266 L2HGDHQ9H9P8 463 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.24□□□□□ -0.61
PTPRA-202ENST00000318266 KIF2AO00139 706 aaPredicted RBP11.24□□□□□ -0.61
PTPRA-202ENST00000318266 POLR3DP05423 398 aaPredicted RBP11.24□□□□□ -0.61
PTPRA-202ENST00000318266 KRBA2Q6ZNG9 492 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 ERC1Q8IUD2 1116 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 USP6P35125 1406 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 CYP21A2P08686 494 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 ATP1A3P13637 1013 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 NDUFA8P51970 172 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 EIF4A1P60842 406 aaKnown RBP11.24□□□□□ -0.61
PTPRA-202ENST00000318266 RAB11FIP4Q86YS3 637 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 SMARCE1Q969G3 411 aa11.24□□□□□ -0.61
PTPRA-202ENST00000318266 ARGLU1Q9NWB6 273 aaPredicted RBP11.24□□□□□ -0.61
PTPRA-202ENST00000318266 SBNO1A3KN83 1393 aa11.23□□□□□ -0.61
PTPRA-202ENST00000318266 KDRP35968 1356 aa11.23□□□□□ -0.61
PTPRA-202ENST00000318266 TEX35Q5T0J7 233 aa11.23□□□□□ -0.61
PTPRA-202ENST00000318266 ORC3Q9UBD5 711 aaPredicted RBP11.23□□□□□ -0.61
PTPRA-202ENST00000318266 RCOR1Q9UKL0 485 aa11.23□□□□□ -0.61
PTPRA-202ENST00000318266 PCDHA7Q9UN72 937 aa11.23□□□□□ -0.61
PTPRA-202ENST00000318266 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
PTPRA-202ENST00000318266 DDX46Q7L014 1031 aaKnown RBP11.23□□□□□ -0.61
PTPRA-202ENST00000318266 ENGASEQ8NFI3 743 aa11.23□□□□□ -0.61
PTPRA-202ENST00000318266 IPO4Q8TEX9 1081 aaKnown RBP11.23□□□□□ -0.61
PTPRA-202ENST00000318266 UTP14AQ9BVJ6 771 aaKnown RBP11.23□□□□□ -0.61
PTPRA-202ENST00000318266 ZSWIM4Q9H7M6 989 aa11.23□□□□□ -0.61
PTPRA-202ENST00000318266 ADAMTS13Q76LX8 1427 aa11.23□□□□□ -0.61
PTPRA-202ENST00000318266 FAM208AQ9UK61 1670 aaKnown RBP11.23□□□□□ -0.61
PTPRA-202ENST00000318266 A0A0G2JLW4 131 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 FANCGO15287 622 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 NRDCO43847 1150 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 GIGYF1O75420 1035 aaPredicted RBP11.22□□□□□ -0.61
PTPRA-202ENST00000318266 OAS2P29728 719 aaKnown RBP11.22□□□□□ -0.61
PTPRA-202ENST00000318266 TNNT3P45378 269 aaPredicted RBP11.22□□□□□ -0.61
PTPRA-202ENST00000318266 ETF1P62495 437 aaKnown RBP11.22□□□□□ -0.61
PTPRA-202ENST00000318266 CCDC93Q567U6 631 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 NSUN7Q8NE18 718 aaKnown RBP11.22□□□□□ -0.61
PTPRA-202ENST00000318266 OSBPL5Q9H0X9 879 aaPredicted RBP11.22□□□□□ -0.61
PTPRA-202ENST00000318266 COL15A1P39059 1388 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 TULP2O00295 520 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 CTDNEP1O95476 244 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 EVCP57679 992 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 MRPS27Q92552 414 aaKnown RBP11.22□□□□□ -0.61
PTPRA-202ENST00000318266 GJB4Q9NTQ9 266 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 HMG20BQ9P0W2 317 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 FEZ2Q9UHY8 353 aaPredicted RBP11.22□□□□□ -0.61
PTPRA-202ENST00000318266 MON2Q7Z3U7 1717 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 SASH3O75995 380 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 STOX1Q6ZVD7 989 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 C10orf67Q8IYJ2 551 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 CCDC150Q8NCX0 1101 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 PXDNLA1KZ92 1463 aa11.22□□□□□ -0.61
PTPRA-202ENST00000318266 BTBD11A6QL63 1104 aa11.21□□□□□ -0.61
PTPRA-202ENST00000318266 ATF3P18847 181 aa11.21□□□□□ -0.61
PTPRA-202ENST00000318266 HOXC9P31274 260 aa11.21□□□□□ -0.61
PTPRA-202ENST00000318266 STK38Q15208 465 aa11.21□□□□□ -0.61
PTPRA-202ENST00000318266 ZNF396Q96N95 335 aaPredicted RBP11.21□□□□□ -0.61
PTPRA-202ENST00000318266 MED23Q9ULK4 1368 aa11.21□□□□□ -0.61
PTPRA-202ENST00000318266 TRIM66O15016 1216 aa11.21□□□□□ -0.62
PTPRA-202ENST00000318266 TPM4P67936 248 aa11.21□□□□□ -0.62
PTPRA-202ENST00000318266 LRRC59Q96AG4 307 aaKnown RBP11.21□□□□□ -0.62
PTPRA-202ENST00000318266 KAZALD1Q96I82 304 aa11.21□□□□□ -0.62
PTPRA-202ENST00000318266 KIAA1468Q9P260 1216 aa11.21□□□□□ -0.62
PTPRA-202ENST00000318266 ADGRL3Q9HAR2 1447 aa11.21□□□□□ -0.62
PTPRA-202ENST00000318266 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 ZRANB2O95218 330 aaKnown RBP eCLIP11.2□□□□□ -0.62
PTPRA-202ENST00000318266 SERPINC1P01008 464 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 MTX1Q13505 466 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 KRT32Q14532 448 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 CFAP100Q494V2 611 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 FMR1NBQ8N0W7 255 aaPredicted RBP11.2□□□□□ -0.62
PTPRA-202ENST00000318266 DPF2Q92785 391 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 CLIC4Q9Y696 253 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 USP31Q70CQ4 1352 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 GRM8O00222 908 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 SLC3A2P08195 630 aaKnown RBP11.2□□□□□ -0.62
PTPRA-202ENST00000318266 CCDC191Q8NCU4 936 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 GPHNQ9NQX3 736 aaPredicted RBP11.2□□□□□ -0.62
PTPRA-202ENST00000318266 IMPACTQ9P2X3 320 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 MST1RQ04912 1400 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 PSDA5PKW4 1024 aaPredicted RBP11.2□□□□□ -0.62
PTPRA-202ENST00000318266 LMAN1P49257 510 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms