RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 CCDC70Q6NSX1 233 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 NPC1L1Q9UHC9 1359 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 HIP1O00291 1037 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 EPB41L2O43491 1005 aaKnown RBP8.7□□□□□ -1.02
CDHR3-201ENST00000317716 ATP2C2O75185 946 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 CYP2E1P05181 493 aaPredicted RBP8.7□□□□□ -1.02
CDHR3-201ENST00000317716 RXRAP19793 462 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 CWF19L2Q2TBE0 894 aaKnown RBP8.7□□□□□ -1.02
CDHR3-201ENST00000317716 C11orf57Q6ZUT1 292 aaPredicted RBP8.7□□□□□ -1.02
CDHR3-201ENST00000317716 PLCD4Q9BRC7 762 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 CLSTN2Q9H4D0 955 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 CTNNA3Q9UI47 895 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 TTC21AQ8NDW8 1320 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 RTL1A6NKG5 1358 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 HSPA4P34932 840 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 STX17P56962 302 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 SAFBQ15424 915 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDHR3-201ENST00000317716 LRRC8AQ8IWT6 810 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 SMARCC1Q92922 1105 aaPredicted RBP8.7□□□□□ -1.02
CDHR3-201ENST00000317716 CRACR2AQ9BSW2 395 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 XPO4Q9C0E2 1151 aaKnown RBP8.7□□□□□ -1.02
CDHR3-201ENST00000317716 CHPF2Q9P2E5 772 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 TPCN1Q9ULQ1 816 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 USP6P35125 1406 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 GOLIM4O00461 696 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 CBFA2T2O43439 604 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 NBPF7P0C2Y1 421 aaPredicted RBP8.69□□□□□ -1.02
CDHR3-201ENST00000317716 KCNQ4P56696 695 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 MTHFSDQ2M296 383 aaKnown RBP8.69□□□□□ -1.02
CDHR3-201ENST00000317716 DESI2Q9BSY9 194 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 SPATA31A3Q5VYP0 1347 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 BTBD11A6QL63 1104 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 GOLGA8BA8MQT2 603 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 KIF5CO60282 957 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 PPP2R3AQ06190 1150 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 CNNM3Q8NE01 707 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 NUP133Q8WUM0 1156 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 SBNO2Q9Y2G9 1366 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 GNAT3A8MTJ3 354 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 KIAA0754O94854 1291 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 SPECC1Q5M775 1068 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 RNF187Q5TA31 235 aaPredicted RBP8.69□□□□□ -1.02
CDHR3-201ENST00000317716 ERC1Q8IUD2 1116 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 ANKRD20A12PQ8NF67 263 aa8.69□□□□□ -1.02
CDHR3-201ENST00000317716 MRPS27Q92552 414 aaKnown RBP8.69□□□□□ -1.02
CDHR3-201ENST00000317716 ORC3Q9UBD5 711 aaPredicted RBP8.69□□□□□ -1.02
CDHR3-201ENST00000317716 LRRC7Q96NW7 1537 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 CTAGE5O15320 804 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 SF3A3Q12874 501 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDHR3-201ENST00000317716 CUL4AQ13619 759 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 E2F4Q16254 413 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 FILIP1LQ4L180 1135 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 PLEKHO1Q53GL0 409 aaPredicted RBP8.68□□□□□ -1.02
CDHR3-201ENST00000317716 EVI5LQ96CN4 794 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 DDX41Q9UJV9 622 aaKnown RBP8.68□□□□□ -1.02
CDHR3-201ENST00000317716 MAP3K2Q9Y2U5 619 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 SMC1AQ14683 1233 aaKnown RBP8.68□□□□□ -1.02
CDHR3-201ENST00000317716 TTC31Q49AM3 519 aaPredicted RBP8.68□□□□□ -1.02
CDHR3-201ENST00000317716 CCDC150Q8NCX0 1101 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 CAPZA3Q96KX2 299 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 QTRT2Q9H974 415 aaKnown RBP8.68□□□□□ -1.02
CDHR3-201ENST00000317716 EDC4Q6P2E9 1401 aaKnown RBP8.68□□□□□ -1.02
CDHR3-201ENST00000317716 DIP2AQ14689 1571 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 KDM5AP29375 1690 aaKnown RBP8.68□□□□□ -1.02
CDHR3-201ENST00000317716 PTPDC1A2A3K4 754 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 ATP5J2-PTCD1G3V325 749 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 AP5Z1O43299 807 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 VPS53Q5VIR6 699 aa8.68□□□□□ -1.02
CDHR3-201ENST00000317716 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDHR3-201ENST00000317716 SOS1Q07889 1333 aaPredicted RBP8.68□□□□□ -1.02
CDHR3-201ENST00000317716 EXOC5O00471 708 aa8.67□□□□□ -1.02
CDHR3-201ENST00000317716 CLCN6P51797 869 aa8.67□□□□□ -1.02
CDHR3-201ENST00000317716 KRT32Q14532 448 aa8.67□□□□□ -1.02
CDHR3-201ENST00000317716 MICU3Q86XE3 530 aa8.67□□□□□ -1.02
CDHR3-201ENST00000317716 NRXN1Q9ULB1 1477 aa8.67□□□□□ -1.02
CDHR3-201ENST00000317716 ATP7BP35670 1465 aa8.67□□□□□ -1.02
CDHR3-201ENST00000317716 KLHL34Q8N239 644 aa8.67□□□□□ -1.02
CDHR3-201ENST00000317716 CLSTN1O94985 981 aa8.67□□□□□ -1.02
CDHR3-201ENST00000317716 SYKP43405 635 aa8.67□□□□□ -1.02
CDHR3-201ENST00000317716 ENOX2Q16206 610 aaKnown RBP8.67□□□□□ -1.02
CDHR3-201ENST00000317716 IP6K1Q92551 441 aa8.67□□□□□ -1.02
CDHR3-201ENST00000317716 SLC27A2O14975 620 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 AFMP43652 599 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 ZNF569Q5MCW4 686 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 CTR9Q6PD62 1173 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 JMYQ8N9B5 988 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 ZNF526Q8TF50 670 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-201ENST00000317716 SMARCE1Q969G3 411 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 MYD88Q99836 296 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 IL25Q9H293 177 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 PTCH1Q13635 1447 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 TRIM66O15016 1216 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 ADKP55263 362 aaKnown RBP8.66□□□□□ -1.02
CDHR3-201ENST00000317716 TRMT44Q8IYL2 757 aaKnown RBP8.66□□□□□ -1.02
CDHR3-201ENST00000317716 SEC62Q99442 399 aaKnown RBP8.66□□□□□ -1.02
CDHR3-201ENST00000317716 HYPKQ9NX55 129 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 CPS1P31327 1500 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 NSD2O96028 1365 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 AFF2P51816 1311 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 IL13P35225 146 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms