RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 SCARF1Q14162 830 aa33.92■■■■□ 3.02
TUBB6-201ENST00000317702 LRSAM1Q6UWE0 723 aa33.92■■■■□ 3.02
TUBB6-201ENST00000317702 TICAM2Q86XR7 235 aa33.92■■■■□ 3.02
TUBB6-201ENST00000317702 ANP32BQ92688 251 aaKnown RBP33.92■■■■□ 3.02
TUBB6-201ENST00000317702 COL9A3Q14050 684 aaPredicted RBP33.91■■■■□ 3.02
TUBB6-201ENST00000317702 FAM182BQ5T319 152 aa33.91■■■■□ 3.02
TUBB6-201ENST00000317702 DDX60Q8IY21 1712 aaKnown RBP33.91■■■■□ 3.02
TUBB6-201ENST00000317702 ATP6V1DQ9Y5K8 247 aa33.91■■■■□ 3.02
TUBB6-201ENST00000317702 CNTNAP4Q9C0A0 1308 aa33.9■■■■□ 3.02
TUBB6-201ENST00000317702 SYCE3A1L190 88 aa33.9■■■■□ 3.02
TUBB6-201ENST00000317702 FKBP4Q02790 459 aaKnown RBP eCLIP33.9■■■■□ 3.02
TUBB6-201ENST00000317702 KRT32Q14532 448 aa33.9■■■■□ 3.02
TUBB6-201ENST00000317702 ZMYM1Q5SVZ6 1142 aa33.9■■■■□ 3.02
TUBB6-201ENST00000317702 RBSNQ9H1K0 784 aa33.9■■■■□ 3.02
TUBB6-201ENST00000317702 HELLSQ9NRZ9 838 aa33.9■■■■□ 3.02
TUBB6-201ENST00000317702 MEX3CQ5U5Q3 659 aaKnown RBP33.89■■■■□ 3.02
TUBB6-201ENST00000317702 NECAB1Q8N987 351 aa33.89■■■■□ 3.02
TUBB6-201ENST00000317702 SYAP1Q96A49 352 aaPredicted RBP33.89■■■■□ 3.02
TUBB6-201ENST00000317702 PPP1R9BQ96SB3 815 aa33.89■■■■□ 3.02
TUBB6-201ENST00000317702 NHSQ6T4R5 1651 aa33.89■■■■□ 3.02
TUBB6-201ENST00000317702 TRIM44Q96DX7 344 aaPredicted RBP33.89■■■■□ 3.02
TUBB6-201ENST00000317702 U3KPZ7 1027 aaPredicted RBP33.89■■■■□ 3.02
TUBB6-201ENST00000317702 BTAF1O14981 1849 aa33.89■■■■□ 3.02
TUBB6-201ENST00000317702 RNF113AO15541 343 aaKnown RBP33.88■■■■□ 3.01
TUBB6-201ENST00000317702 GADD45BO75293 160 aaPredicted RBP33.88■■■■□ 3.01
TUBB6-201ENST00000317702 HSPA1LP34931 641 aa33.88■■■■□ 3.01
TUBB6-201ENST00000317702 ZNF652Q9Y2D9 606 aa33.88■■■■□ 3.01
TUBB6-201ENST00000317702 ABCC12Q96J65 1359 aa33.88■■■■□ 3.01
TUBB6-201ENST00000317702 PDE8BO95263 885 aa33.88■■■■□ 3.01
TUBB6-201ENST00000317702 CNPY2Q9Y2B0 182 aa33.88■■■■□ 3.01
TUBB6-201ENST00000317702 GJD4Q96KN9 370 aaPredicted RBP33.87■■■■□ 3.01
TUBB6-201ENST00000317702 MTMR6Q9Y217 621 aa33.87■■■■□ 3.01
TUBB6-201ENST00000317702 TCHHQ07283 1943 aa33.87■■■■□ 3.01
TUBB6-201ENST00000317702 TCEANC2Q96MN5 208 aa33.86■■■■□ 3.01
TUBB6-201ENST00000317702 SEC31BQ9NQW1 1179 aa33.86■■■■□ 3.01
TUBB6-201ENST00000317702 LAMB2P55268 1798 aa33.86■■■■□ 3.01
TUBB6-201ENST00000317702 ZAP70P43403 619 aa33.86■■■■□ 3.01
TUBB6-201ENST00000317702 TOB2Q14106 344 aaPredicted RBP33.86■■■■□ 3.01
TUBB6-201ENST00000317702 CLEC4GQ6UXB4 293 aa33.86■■■■□ 3.01
TUBB6-201ENST00000317702 SMIM5Q71RC9 77 aa33.86■■■■□ 3.01
TUBB6-201ENST00000317702 AFF2P51816 1311 aa33.85■■■■□ 3.01
TUBB6-201ENST00000317702 PI16Q6UXB8 463 aa33.84■■■■□ 3.01
TUBB6-201ENST00000317702 MAST3O60307 1309 aa33.84■■■■□ 3.01
TUBB6-201ENST00000317702 MROH5Q6ZUA9 1318 aa33.84■■■■□ 3.01
TUBB6-201ENST00000317702 HELBQ8NG08 1087 aaPredicted RBP33.83■■■■□ 3.01
TUBB6-201ENST00000317702 PDIA4P13667 645 aaKnown RBP33.82■■■■□ 3
TUBB6-201ENST00000317702 MCAMP43121 646 aa33.82■■■■□ 3
TUBB6-201ENST00000317702 CCDC152Q4G0S7 254 aa33.82■■■■□ 3
TUBB6-201ENST00000317702 NEK1Q96PY6 1258 aa33.82■■■■□ 3
TUBB6-201ENST00000317702 RTL9Q8NET4 1388 aa33.82■■■■□ 3
TUBB6-201ENST00000317702 DTNBO60941 627 aa33.81■■■■□ 3
TUBB6-201ENST00000317702 FGFR2P21802 821 aa33.81■■■■□ 3
TUBB6-201ENST00000317702 M0R2C6 588 aa33.81■■■■□ 3
TUBB6-201ENST00000317702 RC3H1Q5TC82 1133 aaKnown RBP33.81■■■■□ 3
TUBB6-201ENST00000317702 ZNF512BQ96KM6 892 aaPredicted RBP33.81■■■■□ 3
TUBB6-201ENST00000317702 SCN7AQ01118 1682 aa33.8■■■■□ 3
TUBB6-201ENST00000317702 PUM3Q15397 648 aaKnown RBP33.8■■■■□ 3
TUBB6-201ENST00000317702 PHF14O94880 888 aa33.8■■■■□ 3
TUBB6-201ENST00000317702 CYP21A2P08686 494 aa33.8■■■■□ 3
TUBB6-201ENST00000317702 OSBP2Q969R2 916 aa33.8■■■■□ 3
TUBB6-201ENST00000317702 DSCC1Q9BVC3 393 aa33.8■■■■□ 3
TUBB6-201ENST00000317702 VPS37CA5D8V6 355 aaPredicted RBP33.79■■■■□ 3
TUBB6-201ENST00000317702 HSP90B1P14625 803 aaKnown RBP33.79■■■■□ 3
TUBB6-201ENST00000317702 BCL2L12Q9HB09 334 aa33.79■■■■□ 3
TUBB6-201ENST00000317702 ATRNO75882 1429 aa33.78■■■■□ 3
TUBB6-201ENST00000317702 ESPNB1AK53 854 aa33.78■■■■□ 3
TUBB6-201ENST00000317702 UBE2HP62256 183 aa33.78■■■■□ 3
TUBB6-201ENST00000317702 MPHOSPH8Q99549 860 aa33.78■■■■□ 3
TUBB6-201ENST00000317702 LARP1BQ659C4 914 aaKnown RBP33.78■■■■□ 3
TUBB6-201ENST00000317702 LPIN2Q92539 896 aa33.78■■■■□ 3
TUBB6-201ENST00000317702 CCNL1Q9UK58 526 aaPredicted RBP33.78■■■■□ 3
TUBB6-201ENST00000317702 AKAP11Q9UKA4 1901 aa33.77■■■■□ 3
TUBB6-201ENST00000317702 RPS6KA4O75676 772 aa33.77■■■■□ 3
TUBB6-201ENST00000317702 PDCP20941 246 aa33.77■■■■□ 3
TUBB6-201ENST00000317702 CLCN1P35523 988 aa33.77■■■■□ 3
TUBB6-201ENST00000317702 PHKA1P46020 1223 aa33.77■■■■□ 3
TUBB6-201ENST00000317702 CSPP1Q1MSJ5 1256 aa33.77■■■■□ 3
TUBB6-201ENST00000317702 ERFEQ4G0M1 354 aa33.77■■■■□ 3
TUBB6-201ENST00000317702 ARAP2Q8WZ64 1704 aa33.77■■■■□ 3
TUBB6-201ENST00000317702 FIBPO43427 364 aa33.76■■■■□ 3
TUBB6-201ENST00000317702 HSPD1P10809 573 aaKnown RBP33.76■■■■□ 3
TUBB6-201ENST00000317702 LRRFIP1Q32MZ4 808 aaKnown RBP33.76■■■■□ 3
TUBB6-201ENST00000317702 CCDC102BQ68D86 513 aa33.76■■■■□ 3
TUBB6-201ENST00000317702 COL4A1P02462 1669 aa33.76■■■□□ 2.99
TUBB6-201ENST00000317702 ZFYP08048 801 aaPredicted RBP33.76■■■□□ 2.99
TUBB6-201ENST00000317702 DNM1Q05193 864 aaKnown RBP33.75■■■□□ 2.99
TUBB6-201ENST00000317702 TBC1D9BQ66K14 1250 aa33.75■■■□□ 2.99
TUBB6-201ENST00000317702 RGL2O15211 777 aa33.75■■■□□ 2.99
TUBB6-201ENST00000317702 ONECUT3O60422 494 aaPredicted RBP33.75■■■□□ 2.99
TUBB6-201ENST00000317702 ARID4AP29374 1257 aaPredicted RBP33.75■■■□□ 2.99
TUBB6-201ENST00000317702 TSPY26PQ9H489 355 aa33.75■■■□□ 2.99
TUBB6-201ENST00000317702 GNPATO15228 680 aa33.74■■■□□ 2.99
TUBB6-201ENST00000317702 BICDL1Q6ZP65 573 aa33.74■■■□□ 2.99
TUBB6-201ENST00000317702 C3orf67Q6ZVT6 689 aa33.74■■■□□ 2.99
TUBB6-201ENST00000317702 SRP68Q9UHB9 627 aaKnown RBP33.74■■■□□ 2.99
TUBB6-201ENST00000317702 NARFQ9UHQ1 456 aa33.74■■■□□ 2.99
TUBB6-201ENST00000317702 SNAP23O00161 211 aa33.73■■■□□ 2.99
TUBB6-201ENST00000317702 IGHMBP2P38935 993 aaKnown RBP33.73■■■□□ 2.99
TUBB6-201ENST00000317702 STOX1Q6ZVD7 989 aa33.73■■■□□ 2.99
TUBB6-201ENST00000317702 WASHC4Q2M389 1173 aa33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms