RNA–Protein interactions for RNA: ENST00000316738.11

EFCAB11-201, Transcript of EF-hand calcium binding domain 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EFCAB11, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-201ENST00000316738 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
EFCAB11-201ENST00000316738 CNNM1Q9NRU3 951 aa13.16□□□□□ -0.3
EFCAB11-201ENST00000316738 ZNF652Q9Y2D9 606 aa13.16□□□□□ -0.3
EFCAB11-201ENST00000316738 ZFYP08048 801 aaPredicted RBP13.15□□□□□ -0.3
EFCAB11-201ENST00000316738 A0A0G2JS52 829 aa13.15□□□□□ -0.3
EFCAB11-201ENST00000316738 FOXP2O15409 715 aa13.15□□□□□ -0.3
EFCAB11-201ENST00000316738 HSP90B1P14625 803 aaKnown RBP13.15□□□□□ -0.3
EFCAB11-201ENST00000316738 ZAP70P43403 619 aa13.15□□□□□ -0.3
EFCAB11-201ENST00000316738 KCNJ4P48050 445 aa13.15□□□□□ -0.3
EFCAB11-201ENST00000316738 TOB2Q14106 344 aaPredicted RBP13.15□□□□□ -0.3
EFCAB11-201ENST00000316738 OSBP2Q969R2 916 aa13.15□□□□□ -0.3
EFCAB11-201ENST00000316738 FSD2A1L4K1 749 aa13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 M0R2C6 588 aa13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 RPS6KA4O75676 772 aa13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 ME3Q16798 604 aa13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 LPIN2Q92539 896 aa13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 LMBRD1Q9NUN5 540 aa13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 TPCN1Q9ULQ1 816 aa13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 HSPD1P10809 573 aaKnown RBP13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 CCDC152Q4G0S7 254 aa13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 SLC10A5Q5PT55 438 aa13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 BLOC1S2Q6QNY1 142 aa13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 SEC31BQ9NQW1 1179 aa13.14□□□□□ -0.31
EFCAB11-201ENST00000316738 FKBP4Q02790 459 aaKnown RBP eCLIP13.13□□□□□ -0.31
EFCAB11-201ENST00000316738 ANKRD1Q15327 319 aa13.13□□□□□ -0.31
EFCAB11-201ENST00000316738 SF3B3Q15393 1217 aaKnown RBP13.13□□□□□ -0.31
EFCAB11-201ENST00000316738 LRRFIP1Q32MZ4 808 aaKnown RBP13.13□□□□□ -0.31
EFCAB11-201ENST00000316738 HSPA1LP34931 641 aa13.13□□□□□ -0.31
EFCAB11-201ENST00000316738 GORABQ5T7V8 394 aa13.13□□□□□ -0.31
EFCAB11-201ENST00000316738 CCDC102BQ68D86 513 aa13.13□□□□□ -0.31
EFCAB11-201ENST00000316738 STOX1Q6ZVD7 989 aa13.13□□□□□ -0.31
EFCAB11-201ENST00000316738 LARP6Q9BRS8 491 aaKnown RBP13.13□□□□□ -0.31
EFCAB11-201ENST00000316738 NARFQ9UHQ1 456 aa13.13□□□□□ -0.31
EFCAB11-201ENST00000316738 KCNQ4P56696 695 aa13.12□□□□□ -0.31
EFCAB11-201ENST00000316738 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
EFCAB11-201ENST00000316738 NEK1Q96PY6 1258 aa13.12□□□□□ -0.31
EFCAB11-201ENST00000316738 GOLGA6L22H0YM25 854 aa13.12□□□□□ -0.31
EFCAB11-201ENST00000316738 KLHL40Q2TBA0 621 aa13.12□□□□□ -0.31
EFCAB11-201ENST00000316738 AGXT2Q9BYV1 514 aa13.12□□□□□ -0.31
EFCAB11-201ENST00000316738 AFF2P51816 1311 aa13.12□□□□□ -0.31
EFCAB11-201ENST00000316738 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 APPBP2Q92624 585 aa13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 TAF1P21675 1872 aa13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 PHKA1P46020 1223 aa13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 TTF1Q15361 905 aaPredicted RBP13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 ERFEQ4G0M1 354 aa13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 WDR33Q9C0J8 1336 aaKnown RBP13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 ADD2P35612 726 aa13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 EXOSC10Q01780 885 aaKnown RBP13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 TBC1D9BQ66K14 1250 aa13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 FBXL16Q8N461 479 aa13.11□□□□□ -0.31
EFCAB11-201ENST00000316738 TCRBV5S4A2TA0A5A2 114 aa13.1□□□□□ -0.31
EFCAB11-201ENST00000316738 C3orf67Q6ZVT6 689 aa13.1□□□□□ -0.31
EFCAB11-201ENST00000316738 AMIGO3Q86WK7 504 aa13.1□□□□□ -0.31
EFCAB11-201ENST00000316738 PUS7LQ9H0K6 701 aaKnown RBP13.1□□□□□ -0.31
EFCAB11-201ENST00000316738 FAM177BA6PVY3 158 aa13.1□□□□□ -0.31
EFCAB11-201ENST00000316738 HMGB1P09429 215 aaKnown RBP13.1□□□□□ -0.31
EFCAB11-201ENST00000316738 CCDC83Q8IWF9 413 aa13.1□□□□□ -0.31
EFCAB11-201ENST00000316738 PIH1D3Q9NQM4 214 aaKnown RBP13.1□□□□□ -0.31
EFCAB11-201ENST00000316738 A0A0G2JLW4 131 aa13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 SYT1P21579 422 aa13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 UBE3CQ15386 1083 aa13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 MPHOSPH8Q99549 860 aa13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 TRPC5Q9UL62 973 aaPredicted RBP13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 UBR3Q6ZT12 1888 aa13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 SLC5A1P13866 664 aa13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 HELBQ8NG08 1087 aaPredicted RBP13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 CCNL1Q9UK58 526 aaPredicted RBP13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 BRWD3Q6RI45 1802 aa13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 IGHMBP2P38935 993 aaKnown RBP13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 FAM182BQ5T319 152 aa13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 ZSCAN25Q6NSZ9 544 aa13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 SMC3Q9UQE7 1217 aa13.09□□□□□ -0.31
EFCAB11-201ENST00000316738 E7EWF7 191 aa13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 STX6O43752 255 aa13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 ZSCAN22P10073 491 aaPredicted RBP13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 GJB2P29033 226 aa13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 DHX32Q7L7V1 743 aaKnown RBP13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 CHAMP1Q96JM3 812 aa13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 TCEANC2Q96MN5 208 aa13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 TCHHQ07283 1943 aa13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 PDIA4P13667 645 aaKnown RBP13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 CHRNDQ07001 517 aa13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 BSDC1Q9NW68 430 aaPredicted RBP13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 ISY1Q9ULR0 285 aaKnown RBP13.08□□□□□ -0.32
EFCAB11-201ENST00000316738 ZNF804BA4D1E1 1349 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 RASGRF1Q13972 1273 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 SEPT12Q8IYM1 358 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 NECAB1Q8N987 351 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 SPATA5Q8NB90 893 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 TMEM87AQ8NBN3 555 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 GPT2Q8TD30 523 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 CDC5LQ99459 802 aaKnown RBP13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms