RNA–Protein interactions for RNA: ENST00000316715.8

GPM6B-201, Transcript of glycoprotein M6B, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene GPM6B, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-201ENST00000316715 RGPD3A6NKT7 1758 aaPredicted RBP9.97□□□□□ -0.81
GPM6B-201ENST00000316715 RGPD4Q7Z3J3 1758 aa9.97□□□□□ -0.81
GPM6B-201ENST00000316715 RNF113AO15541 343 aaKnown RBP9.97□□□□□ -0.81
GPM6B-201ENST00000316715 SLC10A5Q5PT55 438 aa9.97□□□□□ -0.81
GPM6B-201ENST00000316715 KIAA1211Q6ZU35 1233 aa9.97□□□□□ -0.81
GPM6B-201ENST00000316715 DNAJC2Q99543 621 aaKnown RBP9.97□□□□□ -0.81
GPM6B-201ENST00000316715 MROH5Q6ZUA9 1318 aa9.96□□□□□ -0.81
GPM6B-201ENST00000316715 ANKRD18BA2A2Z9 1011 aa9.96□□□□□ -0.81
GPM6B-201ENST00000316715 HSPD1P10809 573 aaKnown RBP9.96□□□□□ -0.81
GPM6B-201ENST00000316715 KLHL34Q8N239 644 aa9.96□□□□□ -0.81
GPM6B-201ENST00000316715 TMEM87AQ8NBN3 555 aa9.96□□□□□ -0.81
GPM6B-201ENST00000316715 GBP4Q96PP9 640 aa9.96□□□□□ -0.81
GPM6B-201ENST00000316715 NBPF3Q9H094 633 aa9.96□□□□□ -0.81
GPM6B-201ENST00000316715 BRPF3Q9ULD4 1205 aa9.96□□□□□ -0.81
GPM6B-201ENST00000316715 LAMB1P07942 1786 aa9.96□□□□□ -0.81
GPM6B-201ENST00000316715 IFIT1P09914 478 aaKnown RBP9.96□□□□□ -0.82
GPM6B-201ENST00000316715 PI16Q6UXB8 463 aa9.96□□□□□ -0.82
GPM6B-201ENST00000316715 GPT2Q8TD30 523 aa9.96□□□□□ -0.82
GPM6B-201ENST00000316715 UTP14AQ9BVJ6 771 aaKnown RBP9.96□□□□□ -0.82
GPM6B-201ENST00000316715 PDRG1Q9NUG6 133 aa9.96□□□□□ -0.82
GPM6B-201ENST00000316715 ZNF646O15015 1829 aaPredicted RBP9.96□□□□□ -0.82
GPM6B-201ENST00000316715 ZAP70P43403 619 aa9.95□□□□□ -0.82
GPM6B-201ENST00000316715 EVCP57679 992 aa9.95□□□□□ -0.82
GPM6B-201ENST00000316715 SF3B3Q15393 1217 aaKnown RBP9.95□□□□□ -0.82
GPM6B-201ENST00000316715 KLHL40Q2TBA0 621 aa9.95□□□□□ -0.82
GPM6B-201ENST00000316715 CYP46A1Q9Y6A2 500 aa9.95□□□□□ -0.82
GPM6B-201ENST00000316715 U3KPZ7 1027 aaPredicted RBP9.95□□□□□ -0.82
GPM6B-201ENST00000316715 ZNF804BA4D1E1 1349 aa9.95□□□□□ -0.82
GPM6B-201ENST00000316715 TNS1Q9HBL0 1735 aaKnown RBP9.95□□□□□ -0.82
GPM6B-201ENST00000316715 ANKRD31Q8N7Z5 1873 aa9.95□□□□□ -0.82
GPM6B-201ENST00000316715 ATP2B3Q16720 1220 aa9.95□□□□□ -0.82
GPM6B-201ENST00000316715 NEUROD6Q96NK8 337 aa9.95□□□□□ -0.82
GPM6B-201ENST00000316715 CCDC85AQ96PX6 553 aaPredicted RBP9.95□□□□□ -0.82
GPM6B-201ENST00000316715 SEC31BQ9NQW1 1179 aa9.95□□□□□ -0.82
GPM6B-201ENST00000316715 USP21Q9UK80 565 aa9.95□□□□□ -0.82
GPM6B-201ENST00000316715 ZNF330Q9Y3S2 320 aaPredicted RBP9.95□□□□□ -0.82
GPM6B-201ENST00000316715 CERKQ8TCT0 537 aa9.95□□□□□ -0.82
GPM6B-201ENST00000316715 SH2B1Q9NRF2 756 aaPredicted RBP9.95□□□□□ -0.82
GPM6B-201ENST00000316715 DDX60LQ5H9U9 1706 aaKnown RBP9.94□□□□□ -0.82
GPM6B-201ENST00000316715 CDK5RAP2Q96SN8 1893 aa9.94□□□□□ -0.82
GPM6B-201ENST00000316715 HCLS1P14317 486 aaPredicted RBP9.94□□□□□ -0.82
GPM6B-201ENST00000316715 PTMSP20962 102 aa9.94□□□□□ -0.82
GPM6B-201ENST00000316715 LDHAL6AQ6ZMR3 332 aa9.94□□□□□ -0.82
GPM6B-201ENST00000316715 NKX2-3Q8TAU0 364 aa9.94□□□□□ -0.82
GPM6B-201ENST00000316715 GJD4Q96KN9 370 aaPredicted RBP9.94□□□□□ -0.82
GPM6B-201ENST00000316715 PIH1D3Q9NQM4 214 aaKnown RBP9.94□□□□□ -0.82
GPM6B-201ENST00000316715 SALL1Q9NSC2 1324 aa9.94□□□□□ -0.82
GPM6B-201ENST00000316715 ADD2P35612 726 aa9.94□□□□□ -0.82
GPM6B-201ENST00000316715 CCDC102BQ68D86 513 aa9.94□□□□□ -0.82
GPM6B-201ENST00000316715 GAS2L3Q86XJ1 694 aa9.94□□□□□ -0.82
GPM6B-201ENST00000316715 NGLY1Q96IV0 654 aa9.94□□□□□ -0.82
GPM6B-201ENST00000316715 ZSCAN31Q96LW9 406 aaPredicted RBP9.94□□□□□ -0.82
GPM6B-201ENST00000316715 LARP6Q9BRS8 491 aaKnown RBP9.94□□□□□ -0.82
GPM6B-201ENST00000316715 PUS7LQ9H0K6 701 aaKnown RBP9.94□□□□□ -0.82
GPM6B-201ENST00000316715 RPS6KA4O75676 772 aa9.94□□□□□ -0.82
GPM6B-201ENST00000316715 PUM3Q15397 648 aaKnown RBP9.94□□□□□ -0.82
GPM6B-201ENST00000316715 LPIN2Q92539 896 aa9.94□□□□□ -0.82
GPM6B-201ENST00000316715 NSFL1CQ9UNZ2 370 aaKnown RBP9.94□□□□□ -0.82
GPM6B-201ENST00000316715 ZMYM6O95789 1325 aa9.93□□□□□ -0.82
GPM6B-201ENST00000316715 SYT1P21579 422 aa9.93□□□□□ -0.82
GPM6B-201ENST00000316715 TM4SF1P30408 202 aa9.93□□□□□ -0.82
GPM6B-201ENST00000316715 PHKA1P46020 1223 aa9.93□□□□□ -0.82
GPM6B-201ENST00000316715 SKOR2Q2VWA4 1001 aaPredicted RBP9.93□□□□□ -0.82
GPM6B-201ENST00000316715 TBC1D9BQ66K14 1250 aa9.93□□□□□ -0.82
GPM6B-201ENST00000316715 NARFQ9UHQ1 456 aa9.93□□□□□ -0.82
GPM6B-201ENST00000316715 ZFYP08048 801 aaPredicted RBP9.93□□□□□ -0.82
GPM6B-201ENST00000316715 PSMA5P28066 241 aa9.93□□□□□ -0.82
GPM6B-201ENST00000316715 KCNQ4P56696 695 aa9.93□□□□□ -0.82
GPM6B-201ENST00000316715 METTL24Q5JXM2 366 aa9.93□□□□□ -0.82
GPM6B-201ENST00000316715 MTMR6Q9Y217 621 aa9.93□□□□□ -0.82
GPM6B-201ENST00000316715 HSP90AA1P07900 732 aaKnown RBP9.92□□□□□ -0.82
GPM6B-201ENST00000316715 ZKSCAN1P17029 563 aaPredicted RBP9.92□□□□□ -0.82
GPM6B-201ENST00000316715 HSPA1LP34931 641 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 KRT32Q14532 448 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 ERFEQ4G0M1 354 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 SMIM5Q71RC9 77 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 NIP7Q9Y221 180 aaKnown RBP eCLIP9.92□□□□□ -0.82
GPM6B-201ENST00000316715 CCDC158Q5M9N0 1113 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 RNF20Q5VTR2 975 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 SMARCC2Q8TAQ2 1214 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 APPBP2Q92624 585 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 TACC3Q9Y6A5 838 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 CCDC88AQ3V6T2 1871 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 AFF2P51816 1311 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 E7EWF7 191 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 UBE3CQ15386 1083 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 TTC39AQ5SRH9 613 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 NEK1Q96PY6 1258 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 LRRC4BQ9NT99 713 aa9.92□□□□□ -0.82
GPM6B-201ENST00000316715 FOCADQ5VW36 1801 aa9.91□□□□□ -0.82
GPM6B-201ENST00000316715 CTDNEP1O95476 244 aa9.91□□□□□ -0.82
GPM6B-201ENST00000316715 ZSCAN22P10073 491 aaPredicted RBP9.91□□□□□ -0.82
GPM6B-201ENST00000316715 ZNF445P59923 1031 aa9.91□□□□□ -0.82
GPM6B-201ENST00000316715 NOL8Q76FK4 1167 aaKnown RBP9.91□□□□□ -0.82
GPM6B-201ENST00000316715 GTF3C6Q969F1 213 aa9.91□□□□□ -0.82
GPM6B-201ENST00000316715 QSER1Q2KHR3 1735 aa9.91□□□□□ -0.82
GPM6B-201ENST00000316715 WTIPA6NIX2 430 aaPredicted RBP9.91□□□□□ -0.82
GPM6B-201ENST00000316715 SNAP23O00161 211 aa9.91□□□□□ -0.82
GPM6B-201ENST00000316715 XRCC6P12956 609 aaKnown RBP eCLIP9.91□□□□□ -0.82
GPM6B-201ENST00000316715 RASGRF1Q13972 1273 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms