RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ELOA2Q8IYF1 753 aaPredicted RBP5.51□□□□□ -1.53
PTPN13-201ENST00000316707 LINC00301Q8NCQ3 95 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 DSCC1Q9BVC3 393 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 NAA15Q9BXJ9 866 aaKnown RBP5.51□□□□□ -1.53
PTPN13-201ENST00000316707 KIDINS220Q9ULH0 1771 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 A6NNZ2 444 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 IRX3P78415 501 aaPredicted RBP5.51□□□□□ -1.53
PTPN13-201ENST00000316707 TUBB8Q3ZCM7 444 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 AMOTQ4VCS5 1084 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 HDXQ7Z353 690 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 VSTM4Q8IW00 320 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 FAM227BQ96M60 508 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 MED4Q9NPJ6 270 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 TUBE1Q9UJT0 475 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 UBASH3AP57075 661 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 ARID5BQ14865 1188 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 PLEKHO1Q53GL0 409 aaPredicted RBP5.51□□□□□ -1.53
PTPN13-201ENST00000316707 MYSM1Q5VVJ2 828 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 Q6ZUG5 572 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 FBXL16Q8N461 479 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 CARD6Q9BX69 1037 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 ADAM21Q9UKJ8 722 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 GRM8O00222 908 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 POLR3GO15318 223 aaPredicted RBP5.51□□□□□ -1.53
PTPN13-201ENST00000316707 CDKL5O76039 1030 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 NLRP6P59044 892 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 A0A0D9SFI3 127 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 PIP4K2AP48426 406 aaPredicted RBP5.51□□□□□ -1.53
PTPN13-201ENST00000316707 ARMCX5Q6P1M9 558 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 NECTIN2Q92692 538 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 C8orf76Q96K31 380 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 TCEANC2Q96MN5 208 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 HELLSQ9NRZ9 838 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 IQSEC3Q9UPP2 1182 aaPredicted RBP5.51□□□□□ -1.53
PTPN13-201ENST00000316707 JAK2O60674 1132 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 TBC1D8O95759 1140 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 MAP3K9P80192 1104 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 CTCFLQ8NI51 663 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-201ENST00000316707 BOLA2Q9H3K6 86 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 ADCY9O60503 1353 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 CCDC102BQ68D86 513 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 DEF6Q9H4E7 631 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 PARP3Q9Y6F1 533 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 NCAPD2Q15021 1401 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 ERBB3P21860 1342 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 PLEKHG1Q9ULL1 1385 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 RPS6KA5O75582 802 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 CAPN2P17655 700 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 CEBPZQ03701 1054 aaKnown RBP5.5□□□□□ -1.53
PTPN13-201ENST00000316707 LONRF2Q1L5Z9 754 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 DDX54Q8TDD1 881 aaKnown RBP5.5□□□□□ -1.53
PTPN13-201ENST00000316707 MYO1AQ9UBC5 1043 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 CEMIPQ8WUJ3 1361 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 SPATA31D1Q6ZQQ2 1576 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 CCDC175P0C221 793 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 TXLNAP40222 546 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 LMAN1P49257 510 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 ICE2Q659A1 982 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 KRBA2Q6ZNG9 492 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 TRIML1Q8N9V2 468 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 PPM1EQ8WY54 764 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 CCDC51Q96ER9 411 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 PPP2R2CQ9Y2T4 447 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 KIF5CO60282 957 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 SLC39A14Q15043 492 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 SRLQ86TD4 932 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 BAG1Q99933 345 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-201ENST00000316707 UTYO14607 1347 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 NPHP4O75161 1426 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-201ENST00000316707 ANKRD26Q9UPS8 1709 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 PPP2R3AQ06190 1150 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 RSRC2Q7L4I2 434 aaKnown RBP5.5□□□□□ -1.53
PTPN13-201ENST00000316707 KBTBD3Q8NAB2 608 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 MLKLQ8NB16 471 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 GPR108Q9NPR9 543 aa5.5□□□□□ -1.53
PTPN13-201ENST00000316707 CPS1P31327 1500 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 CYP21A2P08686 494 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 RPGRIP1Q96KN7 1286 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 UTP14AQ9BVJ6 771 aaKnown RBP5.49□□□□□ -1.53
PTPN13-201ENST00000316707 FUT8Q9BYC5 575 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 DDX21Q9NR30 783 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTPN13-201ENST00000316707 CHPF2Q9P2E5 772 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 METP08581 1390 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 ZNF202O95125 648 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 LMOD1P29536 600 aaPredicted RBP5.49□□□□□ -1.53
PTPN13-201ENST00000316707 DPCR1Q3MIW9 517 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 GORABQ5T7V8 394 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 KANK3Q6NY19 840 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 TRIM65Q6PJ69 517 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 SLC26A8Q96RN1 970 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 CCDC8Q9H0W5 538 aaPredicted RBP5.49□□□□□ -1.53
PTPN13-201ENST00000316707 TMX1Q9H3N1 280 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 CDC23Q9UJX2 597 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 MAGEA9P43362 315 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 SYKP43405 635 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 PIP4K2BP78356 416 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 MAP9Q49MG5 647 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 TAF7LQ5H9L4 462 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 NBPF11Q86T75 865 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 NUTM2AQ8IVF1 878 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms