RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 ZNF594Q96JF6 807 aaPredicted RBP12.47□□□□□ -0.41
HNF4A-201ENST00000316099 INCENPQ9NQS7 918 aa12.47□□□□□ -0.41
HNF4A-201ENST00000316099 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
HNF4A-201ENST00000316099 AOX1Q06278 1338 aa12.47□□□□□ -0.41
HNF4A-201ENST00000316099 IRS4O14654 1257 aaPredicted RBP12.47□□□□□ -0.41
HNF4A-201ENST00000316099 NIP7Q9Y221 180 aaKnown RBP eCLIP12.47□□□□□ -0.41
HNF4A-201ENST00000316099 GNL3LQ9NVN8 582 aaKnown RBP12.46□□□□□ -0.41
HNF4A-201ENST00000316099 CEP131Q9UPN4 1083 aa12.46□□□□□ -0.41
HNF4A-201ENST00000316099 NMIQ13287 307 aaPredicted RBP12.46□□□□□ -0.41
HNF4A-201ENST00000316099 URI1O94763 535 aaPredicted RBP12.46□□□□□ -0.42
HNF4A-201ENST00000316099 JAKMIP3Q5VZ66 844 aa12.46□□□□□ -0.42
HNF4A-201ENST00000316099 KIAA1328Q86T90 577 aa12.46□□□□□ -0.42
HNF4A-201ENST00000316099 DDX11Q96FC9 970 aa12.46□□□□□ -0.42
HNF4A-201ENST00000316099 C16orf45Q96MC5 204 aaPredicted RBP12.46□□□□□ -0.42
HNF4A-201ENST00000316099 ZHX1Q9UKY1 873 aaPredicted RBP12.46□□□□□ -0.42
HNF4A-201ENST00000316099 LIMCH1Q9UPQ0 1083 aa12.46□□□□□ -0.42
HNF4A-201ENST00000316099 CCDC171Q6TFL3 1326 aa12.46□□□□□ -0.42
HNF4A-201ENST00000316099 GOLGA6L9A6NEM1 432 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 SYCP1Q15431 976 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 TNNI3KQ59H18 835 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 PLCD4Q9BRC7 762 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 FPGT-TNNI3KV9GXZ4 949 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 SOS2Q07890 1332 aaPredicted RBP12.45□□□□□ -0.42
HNF4A-201ENST00000316099 UTP14AQ9BVJ6 771 aaKnown RBP12.45□□□□□ -0.42
HNF4A-201ENST00000316099 PXDNQ92626 1479 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 MICALCLQ6ZW33 695 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 PIGBQ92521 554 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 TIGD1Q96MW7 591 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 GTPBP4Q9BZE4 634 aaKnown RBP12.45□□□□□ -0.42
HNF4A-201ENST00000316099 SLC5A1P13866 664 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 ERBB4Q15303 1308 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 NACAP1Q9BZK3 213 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 STX1AQ16623 288 aa12.45□□□□□ -0.42
HNF4A-201ENST00000316099 TOP1P11387 765 aaKnown RBP12.44□□□□□ -0.42
HNF4A-201ENST00000316099 UBE2HP62256 183 aa12.44□□□□□ -0.42
HNF4A-201ENST00000316099 ATP2B2Q01814 1243 aa12.44□□□□□ -0.42
HNF4A-201ENST00000316099 ADCY9O60503 1353 aa12.44□□□□□ -0.42
HNF4A-201ENST00000316099 CEP135Q66GS9 1140 aa12.44□□□□□ -0.42
HNF4A-201ENST00000316099 KRT222Q8N1A0 295 aa12.44□□□□□ -0.42
HNF4A-201ENST00000316099 RBM5P52756 815 aaKnown RBP eCLIP12.44□□□□□ -0.427e-8■■□□□ 13.6
HNF4A-201ENST00000316099 TCIRG1Q13488 830 aa12.44□□□□□ -0.42
HNF4A-201ENST00000316099 USP21Q9UK80 565 aa12.44□□□□□ -0.42
HNF4A-201ENST00000316099 ZFYVE27Q5T4F4 411 aa12.44□□□□□ -0.42
HNF4A-201ENST00000316099 CENPHQ9H3R5 247 aa12.44□□□□□ -0.42
HNF4A-201ENST00000316099 IKQ13123 557 aaPredicted RBP12.43□□□□□ -0.42
HNF4A-201ENST00000316099 CCDC152Q4G0S7 254 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 MEGF6O75095 1541 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 TIMM10P62072 90 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 ANKRD18AQ8IVF6 992 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 CCDC150Q8NCX0 1101 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 ZNF397Q8NF99 534 aaPredicted RBP12.43□□□□□ -0.42
HNF4A-201ENST00000316099 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 ATP2B3Q16720 1220 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 TAF4BQ92750 862 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 LRP2BPQ9P2M1 347 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 ZKSCAN5Q9Y2L8 839 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 SNW1Q13573 536 aaKnown RBP12.43□□□□□ -0.42
HNF4A-201ENST00000316099 POLA2Q14181 598 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 IMMTQ16891 758 aaKnown RBP12.43□□□□□ -0.42
HNF4A-201ENST00000316099 DBNDD2Q9BQY9 259 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 PAG1Q9NWQ8 432 aa12.43□□□□□ -0.42
HNF4A-201ENST00000316099 RBM8AQ9Y5S9 174 aaKnown RBP12.43□□□□□ -0.42
HNF4A-201ENST00000316099 KRT18P05783 430 aaKnown RBP12.42□□□□□ -0.42
HNF4A-201ENST00000316099 GTF2F1P35269 517 aaKnown RBP eCLIP12.42□□□□□ -0.426e-7■■■■□ 23.4
HNF4A-201ENST00000316099 U3KPZ7 1027 aaPredicted RBP12.42□□□□□ -0.42
HNF4A-201ENST00000316099 EYA2O00167 538 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 POLR3GO15318 223 aaPredicted RBP12.42□□□□□ -0.42
HNF4A-201ENST00000316099 HMGB1P09429 215 aaKnown RBP12.42□□□□□ -0.42
HNF4A-201ENST00000316099 ANAPC15P60006 121 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 FERMT3Q86UX7 667 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 CCDC94Q9BW85 323 aaPredicted RBP12.42□□□□□ -0.42
HNF4A-201ENST00000316099 TMX3Q96JJ7 454 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 TANGO6Q9C0B7 1094 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 ITGA6P23229 1130 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 NOLC1Q14978 699 aaKnown RBP eCLIP12.42□□□□□ -0.422e-6■■■■■ 30.6
HNF4A-201ENST00000316099 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
HNF4A-201ENST00000316099 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 STX6O43752 255 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 RFC4P35249 363 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 ENOX2Q16206 610 aaKnown RBP12.42□□□□□ -0.42
HNF4A-201ENST00000316099 KIF4BQ2VIQ3 1234 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 ABCF2Q9UG63 623 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 NDUFB9Q9Y6M9 179 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 CPDO75976 1380 aa12.42□□□□□ -0.42
HNF4A-201ENST00000316099 IGKV5-2P06315 115 aa12.41□□□□□ -0.42
HNF4A-201ENST00000316099 SEPT7Q16181 437 aaKnown RBP12.41□□□□□ -0.42
HNF4A-201ENST00000316099 AIDAQ96BJ3 306 aa12.41□□□□□ -0.42
HNF4A-201ENST00000316099 RAI14Q9P0K7 980 aa12.41□□□□□ -0.42
HNF4A-201ENST00000316099 NFAT5O94916 1531 aa12.41□□□□□ -0.42
HNF4A-201ENST00000316099 EIF5P55010 431 aaKnown RBP12.41□□□□□ -0.42
HNF4A-201ENST00000316099 PIBF1Q8WXW3 757 aa12.41□□□□□ -0.42
HNF4A-201ENST00000316099 CDC5LQ99459 802 aaKnown RBP12.41□□□□□ -0.42
HNF4A-201ENST00000316099 OSBPL3Q9H4L5 887 aa12.41□□□□□ -0.42
HNF4A-201ENST00000316099 EAF2Q96CJ1 260 aaPredicted RBP12.41□□□□□ -0.42
HNF4A-201ENST00000316099 A0A1B0GUL7 405 aa12.41□□□□□ -0.42
HNF4A-201ENST00000316099 HELBQ8NG08 1087 aaPredicted RBP12.41□□□□□ -0.42
HNF4A-201ENST00000316099 WWC3Q9ULE0 1092 aa12.41□□□□□ -0.42
HNF4A-201ENST00000316099 HCLS1P14317 486 aaPredicted RBP12.41□□□□□ -0.42
HNF4A-201ENST00000316099 MCMDC2Q4G0Z9 681 aa12.41□□□□□ -0.42
HNF4A-201ENST00000316099 UNC5CLQ8IV45 518 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms