RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 KIFC2Q96AC6 838 aa10.43□□□□□ -0.74
CTC1-201ENST00000315684 CCDC39Q9UFE4 941 aa10.43□□□□□ -0.74
CTC1-201ENST00000315684 KCNQ2O43526 872 aa10.43□□□□□ -0.74
CTC1-201ENST00000315684 TNNT1P13805 278 aa10.43□□□□□ -0.74
CTC1-201ENST00000315684 CCDC97Q96F63 343 aaPredicted RBP10.43□□□□□ -0.74
CTC1-201ENST00000315684 SPDYE3A6NKU9 549 aa10.43□□□□□ -0.74
CTC1-201ENST00000315684 USP19O94966 1318 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 SPOUT1Q5T280 376 aaKnown RBP10.42□□□□□ -0.74
CTC1-201ENST00000315684 SUCLG2Q96I99 432 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 ABCA8O94911 1581 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 CHMP2AO43633 222 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 MCMDC2Q4G0Z9 681 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 TCERG1LQ5VWI1 586 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 CCDC191Q8NCU4 936 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 ZSCAN31Q96LW9 406 aaPredicted RBP10.42□□□□□ -0.74
CTC1-201ENST00000315684 TCHPQ9BT92 498 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 CCDC12Q8WUD4 166 aaPredicted RBP10.42□□□□□ -0.74
CTC1-201ENST00000315684 KRT23Q9C075 422 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 TFIP11Q9UBB9 837 aaKnown RBP10.42□□□□□ -0.74
CTC1-201ENST00000315684 VAMP4O75379 141 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 ATP8B2P98198 1209 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 CCDC181Q5TID7 509 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 PSMD1Q99460 953 aa10.42□□□□□ -0.74
CTC1-201ENST00000315684 ORC3Q9UBD5 711 aaPredicted RBP10.42□□□□□ -0.74
CTC1-201ENST00000315684 MCM5P33992 734 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 RTN1Q16799 776 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 RAB34Q9BZG1 259 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 RNF181Q9P0P0 153 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 PLIN2Q99541 437 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 ARHGEF10LQ9HCE6 1279 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 KDM5CP41229 1560 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 PLEKHG3A1L390 1219 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 IGHDP01880 384 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 HARSP12081 509 aaKnown RBP10.41□□□□□ -0.74
CTC1-201ENST00000315684 CTSWP56202 376 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 GCC2Q8IWJ2 1684 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 PIK3C2GO75747 1445 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 ZBTB43O43298 467 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 TTC6Q86TZ1 520 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 CCDC150Q8NCX0 1101 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 BRF1Q92994 677 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 WDR33Q9C0J8 1336 aaKnown RBP10.41□□□□□ -0.74
CTC1-201ENST00000315684 EIF5P55010 431 aaKnown RBP10.41□□□□□ -0.74
CTC1-201ENST00000315684 RRP36Q96EU6 259 aaKnown RBP10.41□□□□□ -0.74
CTC1-201ENST00000315684 CALML4Q96GE6 196 aa10.41□□□□□ -0.74
CTC1-201ENST00000315684 HMGB1P09429 215 aaKnown RBP10.4□□□□□ -0.74
CTC1-201ENST00000315684 BCAMP50895 628 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 ERVK-7P63135 1459 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 RFX1P22670 979 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 NSMFQ6X4W1 530 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 ZNF354CQ86Y25 554 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 ZNHIT6Q9NWK9 470 aaKnown RBP10.4□□□□□ -0.74
CTC1-201ENST00000315684 RNF113AO15541 343 aaKnown RBP10.4□□□□□ -0.74
CTC1-201ENST00000315684 CTDSPL2Q05D32 466 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 MAEAQ7L5Y9 396 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 IL17REQ8NFR9 667 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 PIGBQ92521 554 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 SMARCE1Q969G3 411 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 DBNDD2Q9BQY9 259 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 ZFYVE9O95405 1425 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 CFAP45Q9UL16 551 aa10.4□□□□□ -0.74
CTC1-201ENST00000315684 WDR17Q8IZU2 1322 aa10.4□□□□□ -0.75
CTC1-201ENST00000315684 PPP1R12BO60237 982 aaPredicted RBP10.4□□□□□ -0.75
CTC1-201ENST00000315684 ADGBQ8N7X0 1667 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 EIF4A1P60842 406 aaKnown RBP10.39□□□□□ -0.75
CTC1-201ENST00000315684 Q6ZUG5 572 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 PPFIBP1Q86W92 1011 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 EYA2O00167 538 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 DNA2P51530 1060 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 DEFB132Q7Z7B7 95 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 USP48Q86UV5 1035 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 ARHGEF25Q86VW2 580 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 TCP11L1Q9NUJ3 509 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 RBM8AQ9Y5S9 174 aaKnown RBP10.39□□□□□ -0.75
CTC1-201ENST00000315684 WDR66Q8TBY9 1149 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 TEKT1Q969V4 418 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 KIF1BO60333 1816 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 IL16Q14005 1332 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 NOP56O00567 594 aaKnown RBP10.39□□□□□ -0.75
CTC1-201ENST00000315684 DTNBO60941 627 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 BIN1O00499 593 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 TAF12Q16514 161 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 FAM47AQ5JRC9 791 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 MIGA2Q7L4E1 593 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 NCAPG2Q86XI2 1143 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 TSG101Q99816 390 aa10.39□□□□□ -0.75
CTC1-201ENST00000315684 PRC1O43663 620 aa10.38□□□□□ -0.75
CTC1-201ENST00000315684 PARP1P09874 1014 aaKnown RBP10.38□□□□□ -0.75
CTC1-201ENST00000315684 SEC31BQ9NQW1 1179 aa10.38□□□□□ -0.75
CTC1-201ENST00000315684 POLR3AO14802 1390 aaPredicted RBP10.38□□□□□ -0.75
CTC1-201ENST00000315684 ZFYP08048 801 aaPredicted RBP10.38□□□□□ -0.75
CTC1-201ENST00000315684 NBPF7P0C2Y1 421 aaPredicted RBP10.38□□□□□ -0.75
CTC1-201ENST00000315684 SDSP20132 328 aa10.38□□□□□ -0.75
CTC1-201ENST00000315684 GJB2P29033 226 aa10.38□□□□□ -0.75
CTC1-201ENST00000315684 CCDC173Q0VFZ6 552 aa10.38□□□□□ -0.75
CTC1-201ENST00000315684 GDPD2Q9HCC8 539 aa10.38□□□□□ -0.75
CTC1-201ENST00000315684 B4E1Z4 1266 aa10.38□□□□□ -0.75
CTC1-201ENST00000315684 PIM2Q9P1W9 311 aa10.38□□□□□ -0.75
CTC1-201ENST00000315684 DESP17661 470 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms