RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 PIP4K2AP48426 406 aaPredicted RBP14.04□□□□□ -0.16
EBF1-201ENST00000313708 HLTFQ14527 1009 aaKnown RBP eCLIP14.04□□□□□ -0.16
EBF1-201ENST00000313708 MCM10Q7L590 875 aa14.04□□□□□ -0.16
EBF1-201ENST00000313708 MSH6P52701 1360 aa14.03□□□□□ -0.16
EBF1-201ENST00000313708 HPDP32754 393 aaPredicted RBP14.03□□□□□ -0.16
EBF1-201ENST00000313708 IRX1P78414 480 aaPredicted RBP14.03□□□□□ -0.16
EBF1-201ENST00000313708 ZRSR2Q15696 482 aaKnown RBP14.03□□□□□ -0.16
EBF1-201ENST00000313708 NAIF1Q69YI7 327 aaPredicted RBP14.03□□□□□ -0.16
EBF1-201ENST00000313708 PNMA8AQ86V59 439 aaPredicted RBP14.03□□□□□ -0.16
EBF1-201ENST00000313708 RPUSD2Q8IZ73 545 aaKnown RBP14.03□□□□□ -0.16
EBF1-201ENST00000313708 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.03□□□□□ -0.16
EBF1-201ENST00000313708 CCZ1BP86790 482 aa14.03□□□□□ -0.16
EBF1-201ENST00000313708 CCZ1P86791 482 aaPredicted RBP14.03□□□□□ -0.16
EBF1-201ENST00000313708 TUBB2AQ13885 445 aa14.03□□□□□ -0.16
EBF1-201ENST00000313708 IMMTQ16891 758 aaKnown RBP14.03□□□□□ -0.16
EBF1-201ENST00000313708 CPLX4Q7Z7G2 160 aa14.03□□□□□ -0.16
EBF1-201ENST00000313708 SMARCC2Q8TAQ2 1214 aa14.03□□□□□ -0.16
EBF1-201ENST00000313708 TUBB2BQ9BVA1 445 aa14.03□□□□□ -0.16
EBF1-201ENST00000313708 AKR1B15C9JRZ8 316 aaPredicted RBP14.02□□□□□ -0.16
EBF1-201ENST00000313708 TBC1D8O95759 1140 aa14.02□□□□□ -0.16
EBF1-201ENST00000313708 MARCKSP29966 332 aaPredicted RBP14.02□□□□□ -0.16
EBF1-201ENST00000313708 SLC8A1P32418 973 aa14.02□□□□□ -0.16
EBF1-201ENST00000313708 PPFIA1Q13136 1202 aa14.02□□□□□ -0.16
EBF1-201ENST00000313708 TMCO5BA8MYB1 307 aa14.02□□□□□ -0.16
EBF1-201ENST00000313708 E7EVH7 732 aa14.02□□□□□ -0.16
EBF1-201ENST00000313708 EFCAB2Q5VUJ9 269 aa14.02□□□□□ -0.16
EBF1-201ENST00000313708 SND1Q7KZF4 910 aaKnown RBP eCLIP14.02□□□□□ -0.16
EBF1-201ENST00000313708 PIK3R5Q8WYR1 880 aa14.02□□□□□ -0.16
EBF1-201ENST00000313708 SARM1Q6SZW1 724 aa14.02□□□□□ -0.17
EBF1-201ENST00000313708 BOLA2Q9H3K6 86 aa14.02□□□□□ -0.17
EBF1-201ENST00000313708 CREB3L3Q68CJ9 461 aa14.02□□□□□ -0.17
EBF1-201ENST00000313708 CCDC113Q9H0I3 377 aa14.02□□□□□ -0.17
EBF1-201ENST00000313708 NUCKS1Q9H1E3 243 aaKnown RBP14.02□□□□□ -0.17
EBF1-201ENST00000313708 RPGRIP1LQ68CZ1 1315 aa14.02□□□□□ -0.17
EBF1-201ENST00000313708 PLEKHG2Q9H7P9 1386 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 KRT24Q2M2I5 525 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 LONRF3Q496Y0 759 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 KCNG4Q8TDN1 519 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 NEK1Q96PY6 1258 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 IFFO1Q0D2I5 559 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 CCDC102BQ68D86 513 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 LRRN4CLQ8ND94 238 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 ARMC2Q8NEN0 867 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 IFT88Q13099 833 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 SPA17Q15506 151 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 SULT6B1Q6IMI4 303 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 FOXR1Q6PIV2 292 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 SH3GL3Q99963 347 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 PSME1Q06323 249 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 CFAP58Q5T655 872 aa14.01□□□□□ -0.17
EBF1-201ENST00000313708 TACO1Q9BSH4 297 aaKnown RBP14.01□□□□□ -0.17
EBF1-201ENST00000313708 KIF3CO14782 793 aa14□□□□□ -0.17
EBF1-201ENST00000313708 E4F1Q66K89 784 aaPredicted RBP14□□□□□ -0.17
EBF1-201ENST00000313708 SPATS2Q86XZ4 545 aaKnown RBP14□□□□□ -0.17
EBF1-201ENST00000313708 TEX11Q8IYF3 940 aa14□□□□□ -0.17
EBF1-201ENST00000313708 SIRT1Q96EB6 747 aa14□□□□□ -0.17
EBF1-201ENST00000313708 NUP160Q12769 1436 aa14□□□□□ -0.17
EBF1-201ENST00000313708 A6NNZ2 444 aa14□□□□□ -0.17
EBF1-201ENST00000313708 NLRP12P59046 1061 aa14□□□□□ -0.17
EBF1-201ENST00000313708 TUBB8Q3ZCM7 444 aa14□□□□□ -0.17
EBF1-201ENST00000313708 Q6ZUG5 572 aa14□□□□□ -0.17
EBF1-201ENST00000313708 HINFPQ9BQA5 517 aa14□□□□□ -0.17
EBF1-201ENST00000313708 CDC23Q9UJX2 597 aa14□□□□□ -0.17
EBF1-201ENST00000313708 SPTLC2O15270 562 aa14□□□□□ -0.17
EBF1-201ENST00000313708 LTV1Q96GA3 475 aaPredicted RBP14□□□□□ -0.17
EBF1-201ENST00000313708 SLC52A1Q9NWF4 448 aa14□□□□□ -0.17
EBF1-201ENST00000313708 KDM5DQ9BY66 1539 aa14□□□□□ -0.17
EBF1-201ENST00000313708 SGSM2O43147 1006 aa14□□□□□ -0.17
EBF1-201ENST00000313708 RHPN1Q8TCX5 695 aa14□□□□□ -0.17
EBF1-201ENST00000313708 CTTNBP2Q8WZ74 1663 aa14□□□□□ -0.17
EBF1-201ENST00000313708 SPECC1LQ69YQ0 1117 aa13.99□□□□□ -0.17
EBF1-201ENST00000313708 SUGP1Q8IWZ8 645 aaKnown RBP13.99□□□□□ -0.17
EBF1-201ENST00000313708 ANKS4BQ8N8V4 417 aa13.99□□□□□ -0.17
EBF1-201ENST00000313708 EVI5LQ96CN4 794 aa13.99□□□□□ -0.17
EBF1-201ENST00000313708 PPANQ9NQ55 473 aaKnown RBP13.99□□□□□ -0.17
EBF1-201ENST00000313708 JAK2O60674 1132 aa13.99□□□□□ -0.17
EBF1-201ENST00000313708 N4BP1O75113 896 aaKnown RBP13.99□□□□□ -0.17
EBF1-201ENST00000313708 LARGE1O95461 756 aa13.99□□□□□ -0.17
EBF1-201ENST00000313708 SAAL1Q96ER3 474 aa13.99□□□□□ -0.17
EBF1-201ENST00000313708 EIF2AK4Q9P2K8 1649 aaKnown RBP13.99□□□□□ -0.17
EBF1-201ENST00000313708 SF3A3Q12874 501 aaKnown RBP eCLIP13.99□□□□□ -0.17
EBF1-201ENST00000313708 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
EBF1-201ENST00000313708 IFT81Q8WYA0 676 aa13.99□□□□□ -0.17
EBF1-201ENST00000313708 SPDL1Q96EA4 605 aa13.99□□□□□ -0.17
EBF1-201ENST00000313708 WASHC4Q2M389 1173 aa13.99□□□□□ -0.17
EBF1-201ENST00000313708 EHBP1Q8NDI1 1231 aa13.99□□□□□ -0.17
EBF1-201ENST00000313708 NEUROD6Q96NK8 337 aa13.99□□□□□ -0.17
EBF1-201ENST00000313708 N4BP3O15049 544 aa13.98□□□□□ -0.17
EBF1-201ENST00000313708 ZMYND10O75800 440 aa13.98□□□□□ -0.17
EBF1-201ENST00000313708 GCFC2P16383 781 aaKnown RBP13.98□□□□□ -0.17
EBF1-201ENST00000313708 WHAMMP3Q1A5X7 153 aa13.98□□□□□ -0.17
EBF1-201ENST00000313708 SUDS3Q9H7L9 328 aaPredicted RBP13.98□□□□□ -0.17
EBF1-201ENST00000313708 LRRC31Q6UY01 552 aa13.98□□□□□ -0.17
EBF1-201ENST00000313708 PPP1R42Q7Z4L9 355 aa13.98□□□□□ -0.17
EBF1-201ENST00000313708 ABCC4O15439 1325 aa13.98□□□□□ -0.17
EBF1-201ENST00000313708 ECHDC1Q9NTX5 307 aa13.98□□□□□ -0.17
EBF1-201ENST00000313708 A2MP01023 1474 aa13.98□□□□□ -0.17
EBF1-201ENST00000313708 CHRM1P11229 460 aaPredicted RBP13.98□□□□□ -0.17
EBF1-201ENST00000313708 AMPHP49418 695 aa13.98□□□□□ -0.17
EBF1-201ENST00000313708 ANKRD18BA2A2Z9 1011 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms