RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CCDC57Q2TAC2 916 aa18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 CST9Q5W186 159 aa18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 ZC3H15Q8WU90 426 aaKnown RBP18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 COA1Q9GZY4 146 aa18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 CNTNAP1P78357 1384 aa18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 TMEM88BA6NKF7 163 aa18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 RFX5P48382 616 aaPredicted RBP18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 TBC1D10BQ4KMP7 808 aaPredicted RBP18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 AGBL3Q8NEM8 1001 aa18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 MXD3Q9BW11 206 aa18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 GLIS2Q9BZE0 524 aaPredicted RBP18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 TNNQ9UQP3 1299 aa18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 RIPOR2Q9Y4F9 1068 aa18.42■□□□□ 0.54
PPP1CA-201ENST00000312989 ASTN2O75129 1339 aaPredicted RBP18.41■□□□□ 0.54
PPP1CA-201ENST00000312989 USP17L3A6NCW0 530 aa18.41■□□□□ 0.54
PPP1CA-201ENST00000312989 USP17L4A6NCW7 530 aa18.41■□□□□ 0.54
PPP1CA-201ENST00000312989 DLK2Q6UY11 383 aa18.41■□□□□ 0.54
PPP1CA-201ENST00000312989 LDHAL6AQ6ZMR3 332 aa18.41■□□□□ 0.54
PPP1CA-201ENST00000312989 USP17L1Q7RTZ2 530 aa18.41■□□□□ 0.54
PPP1CA-201ENST00000312989 ARHGAP45Q92619 1136 aa18.41■□□□□ 0.54
PPP1CA-201ENST00000312989 H7C1D1 291 aa18.4■□□□□ 0.54
PPP1CA-201ENST00000312989 BCAR3O75815 825 aa18.4■□□□□ 0.54
PPP1CA-201ENST00000312989 VGLL2Q8N8G2 317 aa18.4■□□□□ 0.54
PPP1CA-201ENST00000312989 API5Q9BZZ5 524 aaKnown RBP18.4■□□□□ 0.54
PPP1CA-201ENST00000312989 CD209Q9NNX6 404 aa18.4■□□□□ 0.54
PPP1CA-201ENST00000312989 ZBED9Q6R2W3 1325 aa18.39■□□□□ 0.53
PPP1CA-201ENST00000312989 LRRC24Q50LG9 513 aa18.39■□□□□ 0.53
PPP1CA-201ENST00000312989 STRIP1Q5VSL9 837 aa18.39■□□□□ 0.53
PPP1CA-201ENST00000312989 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
PPP1CA-201ENST00000312989 MKRN1Q9UHC7 482 aaKnown RBP18.39■□□□□ 0.53
PPP1CA-201ENST00000312989 KIF16BQ96L93 1317 aa18.38■□□□□ 0.53
PPP1CA-201ENST00000312989 RASSF10A6NK89 507 aa18.38■□□□□ 0.53
PPP1CA-201ENST00000312989 TRIM27P14373 513 aa18.38■□□□□ 0.53
PPP1CA-201ENST00000312989 KIF4BQ2VIQ3 1234 aa18.38■□□□□ 0.53
PPP1CA-201ENST00000312989 INTS3Q68E01 1043 aaKnown RBP18.38■□□□□ 0.53
PPP1CA-201ENST00000312989 G3V3G9 751 aa18.37■□□□□ 0.53
PPP1CA-201ENST00000312989 IL1R1P14778 569 aa18.37■□□□□ 0.53
PPP1CA-201ENST00000312989 DCAF8Q5TAQ9 597 aa18.37■□□□□ 0.53
PPP1CA-201ENST00000312989 CERS5Q8N5B7 392 aa18.37■□□□□ 0.53
PPP1CA-201ENST00000312989 MEIS3Q99687 375 aa18.37■□□□□ 0.53
PPP1CA-201ENST00000312989 CNNM1Q9NRU3 951 aa18.37■□□□□ 0.53
PPP1CA-201ENST00000312989 USP17L8P0C7I0 530 aa18.36■□□□□ 0.53
PPP1CA-201ENST00000312989 VEGFBP49765 207 aa18.35■□□□□ 0.53
PPP1CA-201ENST00000312989 PTPN12Q05209 780 aaKnown RBP18.35■□□□□ 0.53
PPP1CA-201ENST00000312989 TAF7LQ5H9L4 462 aa18.35■□□□□ 0.53
PPP1CA-201ENST00000312989 RBM26Q5T8P6 1007 aaKnown RBP18.35■□□□□ 0.53
PPP1CA-201ENST00000312989 CDC37L1Q7L3B6 337 aa18.35■□□□□ 0.53
PPP1CA-201ENST00000312989 MYOZ2Q9NPC6 264 aa18.35■□□□□ 0.53
PPP1CA-201ENST00000312989 ADM5C9JUS6 153 aa18.34■□□□□ 0.53
PPP1CA-201ENST00000312989 KCNJ4P48050 445 aa18.34■□□□□ 0.53
PPP1CA-201ENST00000312989 GTF2IP78347 998 aa18.34■□□□□ 0.53
PPP1CA-201ENST00000312989 UBE4AQ14139 1066 aa18.34■□□□□ 0.53
PPP1CA-201ENST00000312989 ZBED3Q96IU2 234 aaPredicted RBP18.34■□□□□ 0.53
PPP1CA-201ENST00000312989 GGA3Q9NZ52 723 aa18.34■□□□□ 0.53
PPP1CA-201ENST00000312989 TLL2Q9Y6L7 1015 aa18.34■□□□□ 0.53
PPP1CA-201ENST00000312989 MROH5Q6ZUA9 1318 aa18.34■□□□□ 0.53
PPP1CA-201ENST00000312989 THSD7BQ9C0I4 1608 aa18.33■□□□□ 0.53
PPP1CA-201ENST00000312989 PLIN1O60240 522 aa18.33■□□□□ 0.53
PPP1CA-201ENST00000312989 TTLL5Q6EMB2 1281 aa18.33■□□□□ 0.53
PPP1CA-201ENST00000312989 ATF7IPQ6VMQ6 1270 aa18.33■□□□□ 0.53
PPP1CA-201ENST00000312989 ATG9AQ7Z3C6 839 aa18.33■□□□□ 0.53
PPP1CA-201ENST00000312989 USP48Q86UV5 1035 aa18.33■□□□□ 0.53
PPP1CA-201ENST00000312989 FAM84BQ96KN1 310 aaPredicted RBP18.33■□□□□ 0.53
PPP1CA-201ENST00000312989 LRRFIP2Q9Y608 721 aaKnown RBP18.33■□□□□ 0.53
PPP1CA-201ENST00000312989 MYO3BQ8WXR4 1341 aa18.33■□□□□ 0.52
PPP1CA-201ENST00000312989 UBTFL1P0CB47 393 aaPredicted RBP18.32■□□□□ 0.52
PPP1CA-201ENST00000312989 FGFR2P21802 821 aa18.32■□□□□ 0.52
PPP1CA-201ENST00000312989 SCARF1Q14162 830 aa18.32■□□□□ 0.52
PPP1CA-201ENST00000312989 SAPCD2Q86UD0 394 aa18.32■□□□□ 0.52
PPP1CA-201ENST00000312989 TDRD7Q8NHU6 1098 aaKnown RBP18.32■□□□□ 0.52
PPP1CA-201ENST00000312989 PDE8BO95263 885 aa18.31■□□□□ 0.52
PPP1CA-201ENST00000312989 CELF2O95319 508 aaKnown RBP18.31■□□□□ 0.52
PPP1CA-201ENST00000312989 GYG1P46976 350 aa18.31■□□□□ 0.52
PPP1CA-201ENST00000312989 NBPF9Q3BBW0 867 aa18.31■□□□□ 0.52
PPP1CA-201ENST00000312989 ANGEL2Q5VTE6 544 aaKnown RBP18.31■□□□□ 0.52
PPP1CA-201ENST00000312989 KRT26Q7Z3Y9 468 aa18.31■□□□□ 0.52
PPP1CA-201ENST00000312989 FAM205AQ6ZU69 1335 aa18.31■□□□□ 0.52
PPP1CA-201ENST00000312989 EYA2O00167 538 aa18.3■□□□□ 0.52
PPP1CA-201ENST00000312989 WNT10BO00744 389 aa18.3■□□□□ 0.52
PPP1CA-201ENST00000312989 FKBP1AP62942 108 aaKnown RBP18.3■□□□□ 0.52
PPP1CA-201ENST00000312989 DEFB115Q30KQ5 88 aa18.3■□□□□ 0.52
PPP1CA-201ENST00000312989 ZNF804AQ7Z570 1209 aa18.3■□□□□ 0.52
PPP1CA-201ENST00000312989 FBXO33Q7Z6M2 555 aa18.3■□□□□ 0.52
PPP1CA-201ENST00000312989 MTX1Q13505 466 aa18.3■□□□□ 0.52
PPP1CA-201ENST00000312989 KIAA0825Q8IV33 1275 aa18.3■□□□□ 0.52
PPP1CA-201ENST00000312989 JAG2Q9Y219 1238 aa18.3■□□□□ 0.52
PPP1CA-201ENST00000312989 AOX1Q06278 1338 aa18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 PITPNM2Q9BZ72 1349 aa18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 SASH1O94885 1247 aa18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 HSPA1AP0DMV8 641 aaKnown RBP18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 HSPA1BP0DMV9 641 aaKnown RBP18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 METTL24Q5JXM2 366 aa18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 FBXW7Q969H0 707 aa18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 DCPSQ96C86 337 aaKnown RBP18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 TRPM7Q96QT4 1865 aa18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 ABT1Q9ULW3 272 aaKnown RBP18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 SCAF8Q9UPN6 1271 aaKnown RBP18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 PCDHAC2Q9Y5I4 1007 aa18.29■□□□□ 0.52
PPP1CA-201ENST00000312989 HIBADHP31937 336 aaKnown RBP18.28■□□□□ 0.52
PPP1CA-201ENST00000312989 TMEM57Q8N5G2 664 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms