RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 RFX7Q2KHR2 1363 aa29.82■■■□□ 2.36
HOXB3-201ENST00000311626 USP28Q96RU2 1077 aa29.81■■■□□ 2.36
HOXB3-201ENST00000311626 STRN4Q9NRL3 753 aa29.81■■■□□ 2.36
HOXB3-201ENST00000311626 ZNF165P49910 485 aa29.81■■■□□ 2.36
HOXB3-201ENST00000311626 SCARF1Q14162 830 aa29.81■■■□□ 2.36
HOXB3-201ENST00000311626 WASHC4Q2M389 1173 aa29.81■■■□□ 2.36
HOXB3-201ENST00000311626 DSCC1Q9BVC3 393 aa29.81■■■□□ 2.36
HOXB3-201ENST00000311626 SPTLC3Q9NUV7 552 aa29.81■■■□□ 2.36
HOXB3-201ENST00000311626 GLIPR1L2Q4G1C9 344 aa29.8■■■□□ 2.36
HOXB3-201ENST00000311626 GORABQ5T7V8 394 aa29.8■■■□□ 2.36
HOXB3-201ENST00000311626 CCAR1Q8IX12 1150 aaKnown RBP29.8■■■□□ 2.36
HOXB3-201ENST00000311626 MYRIPQ8NFW9 859 aa29.8■■■□□ 2.36
HOXB3-201ENST00000311626 FAM89AQ96GI7 184 aa29.8■■■□□ 2.36
HOXB3-201ENST00000311626 LAMA4Q16363 1823 aa29.8■■■□□ 2.36
HOXB3-201ENST00000311626 PDIA3P30101 505 aaKnown RBP29.8■■■□□ 2.36
HOXB3-201ENST00000311626 ZSCAN16Q9H4T2 348 aaPredicted RBP29.8■■■□□ 2.36
HOXB3-201ENST00000311626 CCDC191Q8NCU4 936 aa29.79■■■□□ 2.36
HOXB3-201ENST00000311626 CEP126Q9P2H0 1117 aa29.79■■■□□ 2.36
HOXB3-201ENST00000311626 CFAP45Q9UL16 551 aa29.79■■■□□ 2.36
HOXB3-201ENST00000311626 RBM43Q6ZSC3 357 aaKnown RBP29.78■■■□□ 2.36
HOXB3-201ENST00000311626 HMGB1P09429 215 aaKnown RBP29.78■■■□□ 2.36
HOXB3-201ENST00000311626 PCDH11XQ9BZA7 1347 aa29.78■■■□□ 2.36
HOXB3-201ENST00000311626 PCDH11YQ9BZA8 1340 aa29.78■■■□□ 2.36
HOXB3-201ENST00000311626 C11orf57Q6ZUT1 292 aaPredicted RBP29.77■■■□□ 2.36
HOXB3-201ENST00000311626 CADPS2Q86UW7 1296 aa29.77■■■□□ 2.36
HOXB3-201ENST00000311626 TTC39AQ5SRH9 613 aa29.77■■■□□ 2.36
HOXB3-201ENST00000311626 CCDC57Q2TAC2 916 aa29.76■■■□□ 2.36
HOXB3-201ENST00000311626 ILDR1Q86SU0 546 aaPredicted RBP29.76■■■□□ 2.36
HOXB3-201ENST00000311626 XAGE2Q96GT9 111 aa29.76■■■□□ 2.36
HOXB3-201ENST00000311626 GJB4Q9NTQ9 266 aa29.76■■■□□ 2.36
HOXB3-201ENST00000311626 GOLGA6L6A8MZA4 724 aa29.76■■■□□ 2.35
HOXB3-201ENST00000311626 HSPA2P54652 639 aa29.76■■■□□ 2.35
HOXB3-201ENST00000311626 LLPHQ9BRT6 129 aaKnown RBP29.76■■■□□ 2.35
HOXB3-201ENST00000311626 GPR108Q9NPR9 543 aa29.76■■■□□ 2.35
HOXB3-201ENST00000311626 ZNF75DP51815 510 aa29.75■■■□□ 2.35
HOXB3-201ENST00000311626 PKD1L3Q7Z443 1732 aa29.75■■■□□ 2.35
HOXB3-201ENST00000311626 FOXP2O15409 715 aa29.75■■■□□ 2.35
HOXB3-201ENST00000311626 STRCP1A6NGW2 1772 aa29.74■■■□□ 2.35
HOXB3-201ENST00000311626 FDPSP14324 419 aaKnown RBP29.74■■■□□ 2.35
HOXB3-201ENST00000311626 ZAP70P43403 619 aa29.74■■■□□ 2.35
HOXB3-201ENST00000311626 WDR17Q8IZU2 1322 aa29.74■■■□□ 2.35
HOXB3-201ENST00000311626 NAA16Q6N069 864 aaPredicted RBP29.74■■■□□ 2.35
HOXB3-201ENST00000311626 ME1P48163 572 aa29.73■■■□□ 2.35
HOXB3-201ENST00000311626 RCOR1Q9UKL0 485 aa29.73■■■□□ 2.35
HOXB3-201ENST00000311626 ERVV-2B6SEH9 535 aa29.73■■■□□ 2.35
HOXB3-201ENST00000311626 TAF7LQ5H9L4 462 aa29.73■■■□□ 2.35
HOXB3-201ENST00000311626 TDRD7Q8NHU6 1098 aaKnown RBP29.73■■■□□ 2.35
HOXB3-201ENST00000311626 PUS7LQ9H0K6 701 aaKnown RBP29.73■■■□□ 2.35
HOXB3-201ENST00000311626 AGXT2Q9BYV1 514 aa29.72■■■□□ 2.35
HOXB3-201ENST00000311626 GPTP24298 496 aa29.72■■■□□ 2.35
HOXB3-201ENST00000311626 HMGN5P82970 282 aaKnown RBP29.72■■■□□ 2.35
HOXB3-201ENST00000311626 CCDC158Q5M9N0 1113 aa29.72■■■□□ 2.35
HOXB3-201ENST00000311626 DENND2AQ9ULE3 1009 aa29.72■■■□□ 2.35
HOXB3-201ENST00000311626 TJP1Q07157 1748 aa29.71■■■□□ 2.35
HOXB3-201ENST00000311626 POLR3DP05423 398 aaPredicted RBP29.71■■■□□ 2.35
HOXB3-201ENST00000311626 CCDC144BQ3MJ40 725 aa29.71■■■□□ 2.35
HOXB3-201ENST00000311626 BRINP3Q76B58 766 aa29.71■■■□□ 2.35
HOXB3-201ENST00000311626 PLA2G4DQ86XP0 818 aa29.71■■■□□ 2.35
HOXB3-201ENST00000311626 CCDC144CPQ8IYA2 1237 aa29.71■■■□□ 2.35
HOXB3-201ENST00000311626 FGAP02671 866 aa29.71■■■□□ 2.35
HOXB3-201ENST00000311626 SNW1Q13573 536 aaKnown RBP29.71■■■□□ 2.35
HOXB3-201ENST00000311626 DNAJC10Q8IXB1 793 aa29.7■■■□□ 2.35
HOXB3-201ENST00000311626 ZNF710Q8N1W2 664 aa29.7■■■□□ 2.35
HOXB3-201ENST00000311626 FSIP1Q8NA03 581 aa29.7■■■□□ 2.35
HOXB3-201ENST00000311626 PRIMPOLQ96LW4 560 aa29.7■■■□□ 2.35
HOXB3-201ENST00000311626 ASAP1Q9ULH1 1129 aa29.7■■■□□ 2.35
HOXB3-201ENST00000311626 LAMB4A4D0S4 1761 aa29.7■■■□□ 2.35
HOXB3-201ENST00000311626 SALL1Q9NSC2 1324 aa29.7■■■□□ 2.34
HOXB3-201ENST00000311626 IL2RBP14784 551 aa29.7■■■□□ 2.34
HOXB3-201ENST00000311626 TCIRG1Q13488 830 aa29.7■■■□□ 2.34
HOXB3-201ENST00000311626 ARID5BQ14865 1188 aa29.7■■■□□ 2.34
HOXB3-201ENST00000311626 ISCA1Q9BUE6 129 aa29.7■■■□□ 2.34
HOXB3-201ENST00000311626 CPDO75976 1380 aa29.69■■■□□ 2.34
HOXB3-201ENST00000311626 CARMIL3Q8ND23 1372 aa29.69■■■□□ 2.34
HOXB3-201ENST00000311626 CIAO1O76071 339 aa29.69■■■□□ 2.34
HOXB3-201ENST00000311626 CLIP2Q9UDT6 1046 aa29.69■■■□□ 2.34
HOXB3-201ENST00000311626 KCPQ6ZWJ8 1503 aa29.69■■■□□ 2.34
HOXB3-201ENST00000311626 KLHL34Q8N239 644 aa29.69■■■□□ 2.34
HOXB3-201ENST00000311626 NKX2-3Q8TAU0 364 aa29.69■■■□□ 2.34
HOXB3-201ENST00000311626 CCDC73Q6ZRK6 1079 aa29.68■■■□□ 2.34
HOXB3-201ENST00000311626 TPM3P06753 285 aa29.68■■■□□ 2.34
HOXB3-201ENST00000311626 IQCB1Q15051 598 aa29.68■■■□□ 2.34
HOXB3-201ENST00000311626 ZNF274Q96GC6 653 aaPredicted RBP29.68■■■□□ 2.34
HOXB3-201ENST00000311626 BCL11BQ9C0K0 894 aaPredicted RBP29.68■■■□□ 2.34
HOXB3-201ENST00000311626 PRC1O43663 620 aa29.67■■■□□ 2.34
HOXB3-201ENST00000311626 ZSCAN25Q6NSZ9 544 aa29.67■■■□□ 2.34
HOXB3-201ENST00000311626 NUP188Q5SRE5 1749 aa29.67■■■□□ 2.34
HOXB3-201ENST00000311626 KLF18A0A0U1RQI7 1052 aa29.67■■■□□ 2.34
HOXB3-201ENST00000311626 A0A1B0GVL5 298 aa29.67■■■□□ 2.34
HOXB3-201ENST00000311626 RIOK3O14730 519 aaKnown RBP29.67■■■□□ 2.34
HOXB3-201ENST00000311626 CACTINQ8WUQ7 758 aaKnown RBP29.66■■■□□ 2.34
HOXB3-201ENST00000311626 PCDHA7Q9UN72 937 aa29.66■■■□□ 2.34
HOXB3-201ENST00000311626 CLIC4Q9Y696 253 aa29.66■■■□□ 2.34
HOXB3-201ENST00000311626 C16orf45Q96MC5 204 aaPredicted RBP29.66■■■□□ 2.34
HOXB3-201ENST00000311626 ZNF396Q96N95 335 aaPredicted RBP29.66■■■□□ 2.34
HOXB3-201ENST00000311626 GOLGA6L19H0YKK7 550 aa29.65■■■□□ 2.34
HOXB3-201ENST00000311626 HLFQ16534 295 aa29.65■■■□□ 2.34
HOXB3-201ENST00000311626 GOLGA8BA8MQT2 603 aa29.65■■■□□ 2.34
HOXB3-201ENST00000311626 KINO60870 393 aaKnown RBP29.65■■■□□ 2.34
HOXB3-201ENST00000311626 EVA1CP58658 441 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms