RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 UQCRFS1P1P0C7P4 283 aa25.44■■□□□ 1.66
ATG4D-201ENST00000309469 C3orf67Q6ZVT6 689 aa25.44■■□□□ 1.66
ATG4D-201ENST00000309469 TAF6LQ9Y6J9 622 aa25.44■■□□□ 1.66
ATG4D-201ENST00000309469 MAST3O60307 1309 aa25.44■■□□□ 1.66
ATG4D-201ENST00000309469 DDX11L8A8MPP1 907 aa25.43■■□□□ 1.66
ATG4D-201ENST00000309469 ARID4AP29374 1257 aaPredicted RBP25.43■■□□□ 1.66
ATG4D-201ENST00000309469 PHKA1P46020 1223 aa25.43■■□□□ 1.66
ATG4D-201ENST00000309469 FAM196AQ6ZSG2 479 aa25.43■■□□□ 1.66
ATG4D-201ENST00000309469 DSCC1Q9BVC3 393 aa25.43■■□□□ 1.66
ATG4D-201ENST00000309469 KRT32Q14532 448 aa25.43■■□□□ 1.66
ATG4D-201ENST00000309469 TRAPPC3LQ5T215 181 aa25.43■■□□□ 1.66
ATG4D-201ENST00000309469 CLEC17AQ6ZS10 378 aa25.43■■□□□ 1.66
ATG4D-201ENST00000309469 KRT27Q7Z3Y8 459 aa25.42■■□□□ 1.66
ATG4D-201ENST00000309469 OSBP2Q969R2 916 aa25.42■■□□□ 1.66
ATG4D-201ENST00000309469 LRRC4BQ9NT99 713 aa25.42■■□□□ 1.66
ATG4D-201ENST00000309469 PKP1Q13835 747 aa25.41■■□□□ 1.66
ATG4D-201ENST00000309469 TTF1Q15361 905 aaPredicted RBP25.41■■□□□ 1.66
ATG4D-201ENST00000309469 BLOC1S2Q6QNY1 142 aa25.41■■□□□ 1.66
ATG4D-201ENST00000309469 NBPF5PQ86XG9 351 aaPredicted RBP25.41■■□□□ 1.66
ATG4D-201ENST00000309469 TAF1LQ8IZX4 1826 aa25.41■■□□□ 1.66
ATG4D-201ENST00000309469 C4BP0C0L5 1744 aa25.41■■□□□ 1.66
ATG4D-201ENST00000309469 M0R2C6 588 aa25.41■■□□□ 1.66
ATG4D-201ENST00000309469 RFC4P35249 363 aa25.41■■□□□ 1.66
ATG4D-201ENST00000309469 LARP6Q9BRS8 491 aaKnown RBP25.41■■□□□ 1.66
ATG4D-201ENST00000309469 SNAP23O00161 211 aa25.4■■□□□ 1.66
ATG4D-201ENST00000309469 RPS6KB1P23443 525 aa25.4■■□□□ 1.66
ATG4D-201ENST00000309469 CHRNDQ07001 517 aa25.4■■□□□ 1.66
ATG4D-201ENST00000309469 ANKRD18AQ8IVF6 992 aa25.4■■□□□ 1.66
ATG4D-201ENST00000309469 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.4■■□□□ 1.661e-6■■■■■ 36.3
ATG4D-201ENST00000309469 CYP21A2P08686 494 aa25.39■■□□□ 1.66
ATG4D-201ENST00000309469 HSPD1P10809 573 aaKnown RBP25.39■■□□□ 1.66
ATG4D-201ENST00000309469 WASHC4Q2M389 1173 aa25.39■■□□□ 1.66
ATG4D-201ENST00000309469 TPTE2Q6XPS3 522 aa25.39■■□□□ 1.66
ATG4D-201ENST00000309469 APPBP2Q92624 585 aa25.39■■□□□ 1.66
ATG4D-201ENST00000309469 ZSCAN31Q96LW9 406 aaPredicted RBP25.39■■□□□ 1.66
ATG4D-201ENST00000309469 PHF14O94880 888 aa25.39■■□□□ 1.65
ATG4D-201ENST00000309469 ZSCAN25Q6NSZ9 544 aa25.39■■□□□ 1.65
ATG4D-201ENST00000309469 ALDH8A1Q9H2A2 487 aaPredicted RBP25.39■■□□□ 1.65
ATG4D-201ENST00000309469 ZDHHC9Q9Y397 364 aa25.39■■□□□ 1.65
ATG4D-201ENST00000309469 NLRP3Q96P20 1036 aa25.38■■□□□ 1.65
ATG4D-201ENST00000309469 COL9A3Q14050 684 aaPredicted RBP25.37■■□□□ 1.65
ATG4D-201ENST00000309469 PIH1D3Q9NQM4 214 aaKnown RBP25.37■■□□□ 1.65
ATG4D-201ENST00000309469 BSDC1Q9NW68 430 aaPredicted RBP25.37■■□□□ 1.65
ATG4D-201ENST00000309469 ARAP2Q8WZ64 1704 aa25.37■■□□□ 1.65
ATG4D-201ENST00000309469 BAG4O95429 457 aaKnown RBP25.37■■□□□ 1.65
ATG4D-201ENST00000309469 NEK1Q96PY6 1258 aa25.37■■□□□ 1.65
ATG4D-201ENST00000309469 SH2B1Q9NRF2 756 aaPredicted RBP25.37■■□□□ 1.65
ATG4D-201ENST00000309469 COL24A1Q17RW2 1714 aa25.36■■□□□ 1.65
ATG4D-201ENST00000309469 ADRA2BP18089 450 aa25.36■■□□□ 1.65
ATG4D-201ENST00000309469 ANKRD1Q15327 319 aa25.36■■□□□ 1.65
ATG4D-201ENST00000309469 SPATA5Q8NB90 893 aa25.36■■□□□ 1.65
ATG4D-201ENST00000309469 COL4A1P02462 1669 aa25.36■■□□□ 1.65
ATG4D-201ENST00000309469 AKAP11Q9UKA4 1901 aa25.36■■□□□ 1.65
ATG4D-201ENST00000309469 ADD2P35612 726 aa25.35■■□□□ 1.65
ATG4D-201ENST00000309469 SLC27A3Q5K4L6 730 aa25.35■■□□□ 1.65
ATG4D-201ENST00000309469 LARGE1O95461 756 aa25.35■■□□□ 1.65
ATG4D-201ENST00000309469 PUS7LQ9H0K6 701 aaKnown RBP25.35■■□□□ 1.65
ATG4D-201ENST00000309469 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.35■■□□□ 1.65
ATG4D-201ENST00000309469 TRAK2O60296 914 aa25.34■■□□□ 1.65
ATG4D-201ENST00000309469 TRIM37O94972 964 aa25.34■■□□□ 1.65
ATG4D-201ENST00000309469 SLC9C2Q5TAH2 1124 aa25.34■■□□□ 1.65
ATG4D-201ENST00000309469 PTMSP20962 102 aa25.33■■□□□ 1.65
ATG4D-201ENST00000309469 RASGRF1Q13972 1273 aa25.33■■□□□ 1.65
ATG4D-201ENST00000309469 CELF1Q92879 486 aaKnown RBP25.33■■□□□ 1.65
ATG4D-201ENST00000309469 IDH1O75874 414 aaKnown RBP25.33■■□□□ 1.65
ATG4D-201ENST00000309469 BCAMP50895 628 aa25.33■■□□□ 1.65
ATG4D-201ENST00000309469 UBE3CQ15386 1083 aa25.33■■□□□ 1.65
ATG4D-201ENST00000309469 ME3Q16798 604 aa25.33■■□□□ 1.65
ATG4D-201ENST00000309469 TPCN1Q9ULQ1 816 aa25.33■■□□□ 1.65
ATG4D-201ENST00000309469 MINPP1Q9UNW1 487 aa25.33■■□□□ 1.65
ATG4D-201ENST00000309469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.32■■□□□ 1.64
ATG4D-201ENST00000309469 BRD1O95696 1058 aa25.32■■□□□ 1.64
ATG4D-201ENST00000309469 CCDC24Q8N4L8 307 aa25.32■■□□□ 1.64
ATG4D-201ENST00000309469 TCEANC2Q96MN5 208 aa25.32■■□□□ 1.64
ATG4D-201ENST00000309469 GOLGA6L22H0YM25 854 aa25.31■■□□□ 1.64
ATG4D-201ENST00000309469 TOB2Q14106 344 aaPredicted RBP25.31■■□□□ 1.64
ATG4D-201ENST00000309469 NFIXQ14938 502 aa25.31■■□□□ 1.64
ATG4D-201ENST00000309469 STOX1Q6ZVD7 989 aa25.31■■□□□ 1.64
ATG4D-201ENST00000309469 CTNNA3Q9UI47 895 aa25.31■■□□□ 1.64
ATG4D-201ENST00000309469 C4AP0C0L4 1744 aa25.31■■□□□ 1.64
ATG4D-201ENST00000309469 RPS8P62241 208 aaKnown RBP25.31■■□□□ 1.64
ATG4D-201ENST00000309469 UBE4AQ14139 1066 aa25.31■■□□□ 1.64
ATG4D-201ENST00000309469 CCDC83Q8IWF9 413 aa25.31■■□□□ 1.64
ATG4D-201ENST00000309469 CARMIL3Q8ND23 1372 aa25.3■■□□□ 1.64
ATG4D-201ENST00000309469 FOXP2O15409 715 aa25.3■■□□□ 1.64
ATG4D-201ENST00000309469 GPAA1O43292 621 aa25.3■■□□□ 1.64
ATG4D-201ENST00000309469 HMGB1P09429 215 aaKnown RBP25.3■■□□□ 1.64
ATG4D-201ENST00000309469 BRWD3Q6RI45 1802 aa25.3■■□□□ 1.64
ATG4D-201ENST00000309469 PDE6AP16499 860 aa25.29■■□□□ 1.64
ATG4D-201ENST00000309469 RBM6P78332 1123 aaKnown RBP25.29■■□□□ 1.64
ATG4D-201ENST00000309469 ZNF772Q68DY9 489 aaPredicted RBP25.29■■□□□ 1.64
ATG4D-201ENST00000309469 SMC3Q9UQE7 1217 aa25.29■■□□□ 1.64
ATG4D-201ENST00000309469 ZNF532Q9HCE3 1301 aa25.29■■□□□ 1.64
ATG4D-201ENST00000309469 NPHP1O15259 732 aa25.29■■□□□ 1.64
ATG4D-201ENST00000309469 TTLL5Q6EMB2 1281 aa25.29■■□□□ 1.64
ATG4D-201ENST00000309469 WWC3Q9ULE0 1092 aa25.29■■□□□ 1.64
ATG4D-201ENST00000309469 A0A0G2JLW4 131 aa25.28■■□□□ 1.64
ATG4D-201ENST00000309469 TCRBV5S4A2TA0A5A2 114 aa25.28■■□□□ 1.64
ATG4D-201ENST00000309469 E7EWF7 191 aa25.27■■□□□ 1.64
ATG4D-201ENST00000309469 TM4SF1P30408 202 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms