RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 RGL2O15211 777 aa26.89■■□□□ 1.89
PDLIM2-202ENST00000308354 SF3B3Q15393 1217 aaKnown RBP26.89■■□□□ 1.89
PDLIM2-202ENST00000308354 MAST3O60307 1309 aa26.88■■□□□ 1.89
PDLIM2-202ENST00000308354 CDC5LQ99459 802 aaKnown RBP26.88■■□□□ 1.89
PDLIM2-202ENST00000308354 NYXQ9GZU5 481 aa26.88■■□□□ 1.89
PDLIM2-202ENST00000308354 ZSWIM6Q9HCJ5 1215 aa26.88■■□□□ 1.89
PDLIM2-202ENST00000308354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.88■■□□□ 1.89
PDLIM2-202ENST00000308354 M0R2C6 588 aa26.88■■□□□ 1.89
PDLIM2-202ENST00000308354 SLC5A1P13866 664 aa26.88■■□□□ 1.89
PDLIM2-202ENST00000308354 RNF20Q5VTR2 975 aa26.88■■□□□ 1.89
PDLIM2-202ENST00000308354 OSBP2Q969R2 916 aa26.88■■□□□ 1.89
PDLIM2-202ENST00000308354 TAF1P21675 1872 aa26.88■■□□□ 1.89
PDLIM2-202ENST00000308354 SLC10A5Q5PT55 438 aa26.87■■□□□ 1.89
PDLIM2-202ENST00000308354 CLEC17AQ6ZS10 378 aa26.87■■□□□ 1.89
PDLIM2-202ENST00000308354 CYP46A1Q9Y6A2 500 aa26.87■■□□□ 1.89
PDLIM2-202ENST00000308354 WTIPA6NIX2 430 aaPredicted RBP26.86■■□□□ 1.89
PDLIM2-202ENST00000308354 WASHC4Q2M389 1173 aa26.86■■□□□ 1.89
PDLIM2-202ENST00000308354 TPTE2Q6XPS3 522 aa26.86■■□□□ 1.89
PDLIM2-202ENST00000308354 RUFY3Q7L099 469 aa26.86■■□□□ 1.89
PDLIM2-202ENST00000308354 ANKRD18AQ8IVF6 992 aa26.86■■□□□ 1.89
PDLIM2-202ENST00000308354 CELF1Q92879 486 aaKnown RBP26.86■■□□□ 1.89
PDLIM2-202ENST00000308354 PDRG1Q9NUG6 133 aa26.86■■□□□ 1.89
PDLIM2-202ENST00000308354 BAG4O95429 457 aaKnown RBP26.86■■□□□ 1.89
PDLIM2-202ENST00000308354 CUL4AQ13619 759 aa26.86■■□□□ 1.89
PDLIM2-202ENST00000308354 TM6SF1Q9BZW5 370 aa26.86■■□□□ 1.89
PDLIM2-202ENST00000308354 NPHP1O15259 732 aa26.85■■□□□ 1.89
PDLIM2-202ENST00000308354 TCEANC2Q96MN5 208 aa26.85■■□□□ 1.89
PDLIM2-202ENST00000308354 ZNF512BQ96KM6 892 aaPredicted RBP26.85■■□□□ 1.89
PDLIM2-202ENST00000308354 NLRP3Q96P20 1036 aa26.85■■□□□ 1.89
PDLIM2-202ENST00000308354 ARID4AP29374 1257 aaPredicted RBP26.84■■□□□ 1.89
PDLIM2-202ENST00000308354 PIH1D3Q9NQM4 214 aaKnown RBP26.84■■□□□ 1.89
PDLIM2-202ENST00000308354 C4AP0C0L4 1744 aa26.84■■□□□ 1.89
PDLIM2-202ENST00000308354 AKAP11Q9UKA4 1901 aa26.84■■□□□ 1.89
PDLIM2-202ENST00000308354 BCAMP50895 628 aa26.84■■□□□ 1.89
PDLIM2-202ENST00000308354 RBM6P78332 1123 aaKnown RBP26.84■■□□□ 1.89
PDLIM2-202ENST00000308354 U3KPZ7 1027 aaPredicted RBP26.84■■□□□ 1.89
PDLIM2-202ENST00000308354 RPAP1Q9BWH6 1393 aaPredicted RBP26.83■■□□□ 1.89
PDLIM2-202ENST00000308354 CYP21A2P08686 494 aa26.83■■□□□ 1.89
PDLIM2-202ENST00000308354 NFIXQ14938 502 aa26.83■■□□□ 1.89
PDLIM2-202ENST00000308354 HMG20BQ9P0W2 317 aa26.83■■□□□ 1.89
PDLIM2-202ENST00000308354 ZDHHC9Q9Y397 364 aa26.83■■□□□ 1.89
PDLIM2-202ENST00000308354 HSPD1P10809 573 aaKnown RBP26.82■■□□□ 1.88
PDLIM2-202ENST00000308354 PUS7LQ9H0K6 701 aaKnown RBP26.82■■□□□ 1.88
PDLIM2-202ENST00000308354 A0A0G2JLW4 131 aa26.82■■□□□ 1.88
PDLIM2-202ENST00000308354 IDH1O75874 414 aaKnown RBP26.82■■□□□ 1.88
PDLIM2-202ENST00000308354 UQCRFS1P1P0C7P4 283 aa26.82■■□□□ 1.88
PDLIM2-202ENST00000308354 RASGRF1Q13972 1273 aa26.82■■□□□ 1.88
PDLIM2-202ENST00000308354 ZNF772Q68DY9 489 aaPredicted RBP26.82■■□□□ 1.88
PDLIM2-202ENST00000308354 LIMCH1Q9UPQ0 1083 aa26.82■■□□□ 1.88
PDLIM2-202ENST00000308354 PSMA5P28066 241 aa26.81■■□□□ 1.88
PDLIM2-202ENST00000308354 TICAM2Q86XR7 235 aa26.81■■□□□ 1.88
PDLIM2-202ENST00000308354 PROM2Q8N271 834 aa26.81■■□□□ 1.88
PDLIM2-202ENST00000308354 LARGE1O95461 756 aa26.81■■□□□ 1.88
PDLIM2-202ENST00000308354 LRRFIP1Q32MZ4 808 aaKnown RBP26.81■■□□□ 1.88
PDLIM2-202ENST00000308354 SPATA5Q8NB90 893 aa26.81■■□□□ 1.88
PDLIM2-202ENST00000308354 INTS4Q96HW7 963 aaKnown RBP26.81■■□□□ 1.88
PDLIM2-202ENST00000308354 BSDC1Q9NW68 430 aaPredicted RBP26.81■■□□□ 1.88
PDLIM2-202ENST00000308354 ZFYP08048 801 aaPredicted RBP26.8■■□□□ 1.88
PDLIM2-202ENST00000308354 SLC27A3Q5K4L6 730 aa26.8■■□□□ 1.88
PDLIM2-202ENST00000308354 SLC9C2Q5TAH2 1124 aa26.8■■□□□ 1.88
PDLIM2-202ENST00000308354 BLOC1S2Q6QNY1 142 aa26.8■■□□□ 1.88
PDLIM2-202ENST00000308354 CASZ1Q86V15 1759 aa26.8■■□□□ 1.88
PDLIM2-202ENST00000308354 COL24A1Q17RW2 1714 aa26.8■■□□□ 1.88
PDLIM2-202ENST00000308354 GOLGA6L22H0YM25 854 aa26.8■■□□□ 1.88
PDLIM2-202ENST00000308354 DSCC1Q9BVC3 393 aa26.8■■□□□ 1.88
PDLIM2-202ENST00000308354 MINPP1Q9UNW1 487 aa26.8■■□□□ 1.88
PDLIM2-202ENST00000308354 DTNBO60941 627 aa26.79■■□□□ 1.88
PDLIM2-202ENST00000308354 PTMSP20962 102 aa26.79■■□□□ 1.88
PDLIM2-202ENST00000308354 TXNRD1Q16881 649 aa26.79■■□□□ 1.88
PDLIM2-202ENST00000308354 TSGA10IPQ3SY00 556 aa26.79■■□□□ 1.88
PDLIM2-202ENST00000308354 IL27Q8NEV9 243 aa26.79■■□□□ 1.88
PDLIM2-202ENST00000308354 APPBP2Q92624 585 aa26.79■■□□□ 1.88
PDLIM2-202ENST00000308354 IQSEC3Q9UPP2 1182 aaPredicted RBP26.79■■□□□ 1.88
PDLIM2-202ENST00000308354 TTF1Q15361 905 aaPredicted RBP26.78■■□□□ 1.88
PDLIM2-202ENST00000308354 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.78■■□□□ 1.88
PDLIM2-202ENST00000308354 ADRA2BP18089 450 aa26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 RPS8P62241 208 aaKnown RBP26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 FOXD4L5Q5VV16 416 aaPredicted RBP26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 MCTP1Q6DN14 999 aa26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 TTLL5Q6EMB2 1281 aa26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 FOXD4L4Q8WXT5 416 aaPredicted RBP26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 WWC3Q9ULE0 1092 aa26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 CARMIL3Q8ND23 1372 aa26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 ARAP2Q8WZ64 1704 aa26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 GYS1P13807 737 aa26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 RPS6KB1P23443 525 aa26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 ADD2P35612 726 aa26.77■■□□□ 1.88
PDLIM2-202ENST00000308354 FOXP2O15409 715 aa26.76■■□□□ 1.87
PDLIM2-202ENST00000308354 GYG1P46976 350 aa26.76■■□□□ 1.87
PDLIM2-202ENST00000308354 SKOR2Q2VWA4 1001 aaPredicted RBP26.76■■□□□ 1.87
PDLIM2-202ENST00000308354 STOX1Q6ZVD7 989 aa26.76■■□□□ 1.87
PDLIM2-202ENST00000308354 MYO5AQ9Y4I1 1855 aaKnown RBP26.76■■□□□ 1.87
PDLIM2-202ENST00000308354 NEK1Q96PY6 1258 aa26.75■■□□□ 1.87
PDLIM2-202ENST00000308354 UBR3Q6ZT12 1888 aa26.75■■□□□ 1.87
PDLIM2-202ENST00000308354 TM4SF1P30408 202 aa26.75■■□□□ 1.87
PDLIM2-202ENST00000308354 CNBD1Q8NA66 436 aa26.75■■□□□ 1.87
PDLIM2-202ENST00000308354 TPCN1Q9ULQ1 816 aa26.75■■□□□ 1.87
PDLIM2-202ENST00000308354 GPAA1O43292 621 aa26.74■■□□□ 1.87
PDLIM2-202ENST00000308354 KRT32Q14532 448 aa26.74■■□□□ 1.87
PDLIM2-202ENST00000308354 BRPF3Q9ULD4 1205 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms