RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 LUZP1Q86V48 1076 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 TTC14Q96N46 770 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 BOLA2Q9H3K6 86 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 CLASRPQ8N2M8 674 aaKnown RBP12.12□□□□□ -0.47
MSRB3-201ENST00000308259 GOLGA5Q8TBA6 731 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 ZSWIM4Q9H7M6 989 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 RAB11FIP3O75154 756 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
MSRB3-201ENST00000308259 SRLQ86TD4 932 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 TCHHQ07283 1943 aa12.11□□□□□ -0.47
MSRB3-201ENST00000308259 FOSBP53539 338 aa12.11□□□□□ -0.47
MSRB3-201ENST00000308259 EGFL6Q8IUX8 553 aa12.11□□□□□ -0.47
MSRB3-201ENST00000308259 RNF217Q8TC41 542 aa12.11□□□□□ -0.47
MSRB3-201ENST00000308259 TNMDQ9H2S6 317 aa12.11□□□□□ -0.47
MSRB3-201ENST00000308259 F13A1P00488 732 aa12.11□□□□□ -0.47
MSRB3-201ENST00000308259 MYL6BP14649 208 aa12.11□□□□□ -0.47
MSRB3-201ENST00000308259 SMC1AQ14683 1233 aaKnown RBP12.11□□□□□ -0.47
MSRB3-201ENST00000308259 ARFGAP3Q9NP61 516 aa12.11□□□□□ -0.47
MSRB3-201ENST00000308259 RGPD8O14715 1765 aaPredicted RBP12.11□□□□□ -0.47
MSRB3-201ENST00000308259 SEC31AO94979 1220 aaKnown RBP12.11□□□□□ -0.47
MSRB3-201ENST00000308259 HYPKQ9NX55 129 aa12.11□□□□□ -0.47
MSRB3-201ENST00000308259 RGPD1P0DJD0 1748 aa12.11□□□□□ -0.47
MSRB3-201ENST00000308259 PNMA6AP0CW24 399 aaPredicted RBP12.1□□□□□ -0.47
MSRB3-201ENST00000308259 SLC39A6Q13433 755 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 ME3Q16798 604 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 ISM2Q6H9L7 571 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 PLEKHA4Q9H4M7 779 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 DONSONQ9NYP3 566 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
MSRB3-201ENST00000308259 NRBP1Q9UHY1 535 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 CCDC171Q6TFL3 1326 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 KIF1CO43896 1103 aaKnown RBP12.1□□□□□ -0.47
MSRB3-201ENST00000308259 NAP1L1P55209 391 aaKnown RBP12.1□□□□□ -0.47
MSRB3-201ENST00000308259 SYCP1Q15431 976 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 FMNL2Q96PY5 1086 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 NUP62CLQ9H1M0 184 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 TFIP11Q9UBB9 837 aaKnown RBP12.1□□□□□ -0.47
MSRB3-201ENST00000308259 EIF3JO75822 258 aaKnown RBP12.1□□□□□ -0.47
MSRB3-201ENST00000308259 MAGEA9P43362 315 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 LIG3P49916 1009 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 MAP3K11Q16584 847 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 ARMCX6Q7L4S7 300 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 ADCY9O60503 1353 aa12.1□□□□□ -0.47
MSRB3-201ENST00000308259 FRMD3A2A2Y4 597 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 CLCN6P51797 869 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 ST3GAL1Q11201 340 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 SEMA3FQ13275 785 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 DNAI1Q9UI46 699 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 EXOC5O00471 708 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 AP5Z1O43299 807 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 GLRX3O76003 335 aaKnown RBP12.09□□□□□ -0.47
MSRB3-201ENST00000308259 PDE6BP35913 854 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 CABP4P57796 275 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 NEXNQ0ZGT2 675 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 NMIQ13287 307 aaPredicted RBP12.09□□□□□ -0.47
MSRB3-201ENST00000308259 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 TPCN1Q9ULQ1 816 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 ZNF335Q9H4Z2 1342 aaPredicted RBP12.09□□□□□ -0.47
MSRB3-201ENST00000308259 EIF3CLB5ME19 914 aaKnown RBP12.09□□□□□ -0.47
MSRB3-201ENST00000308259 KIAA0754O94854 1291 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 EIF3CQ99613 913 aaKnown RBP12.09□□□□□ -0.47
MSRB3-201ENST00000308259 ECHDC1Q9NTX5 307 aa12.09□□□□□ -0.47
MSRB3-201ENST00000308259 RBM8AQ9Y5S9 174 aaKnown RBP12.09□□□□□ -0.47
MSRB3-201ENST00000308259 LIG1P18858 919 aa12.08□□□□□ -0.47
MSRB3-201ENST00000308259 EAF2Q96CJ1 260 aaPredicted RBP12.08□□□□□ -0.47
MSRB3-201ENST00000308259 SUCLG2Q96I99 432 aa12.08□□□□□ -0.47
MSRB3-201ENST00000308259 ORAI2Q96SN7 254 aa12.08□□□□□ -0.47
MSRB3-201ENST00000308259 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.47
MSRB3-201ENST00000308259 MTMR6Q9Y217 621 aa12.08□□□□□ -0.47
MSRB3-201ENST00000308259 CYP46A1Q9Y6A2 500 aa12.08□□□□□ -0.47
MSRB3-201ENST00000308259 CDR1P51861 262 aa12.08□□□□□ -0.48
MSRB3-201ENST00000308259 CDC37L1Q7L3B6 337 aa12.08□□□□□ -0.48
MSRB3-201ENST00000308259 FBXO18Q8NFZ0 1043 aa12.08□□□□□ -0.48
MSRB3-201ENST00000308259 CDCA7Q9BWT1 371 aaPredicted RBP12.08□□□□□ -0.48
MSRB3-201ENST00000308259 RABEP2Q9H5N1 569 aa12.08□□□□□ -0.48
MSRB3-201ENST00000308259 TMCO5BA8MYB1 307 aa12.08□□□□□ -0.48
MSRB3-201ENST00000308259 CCDC97Q96F63 343 aaPredicted RBP12.08□□□□□ -0.48
MSRB3-201ENST00000308259 IRAK4Q9NWZ3 460 aa12.08□□□□□ -0.48
MSRB3-201ENST00000308259 A0A0D9SFI3 127 aa12.08□□□□□ -0.48
MSRB3-201ENST00000308259 GCP02774 474 aa12.08□□□□□ -0.48
MSRB3-201ENST00000308259 PEX19P40855 299 aa12.08□□□□□ -0.48
MSRB3-201ENST00000308259 RBM6P78332 1123 aaKnown RBP12.08□□□□□ -0.48
MSRB3-201ENST00000308259 AP1ARQ63HQ0 302 aa12.08□□□□□ -0.48
MSRB3-201ENST00000308259 TTC19Q6DKK2 380 aaPredicted RBP12.08□□□□□ -0.48
MSRB3-201ENST00000308259 MMS22LQ6ZRQ5 1243 aa12.08□□□□□ -0.48
MSRB3-201ENST00000308259 JPH2Q9BR39 696 aaPredicted RBP12.08□□□□□ -0.48
MSRB3-201ENST00000308259 ERLIN2O94905 339 aa12.07□□□□□ -0.48
MSRB3-201ENST00000308259 ACTN2P35609 894 aa12.07□□□□□ -0.48
MSRB3-201ENST00000308259 UBE2HP62256 183 aa12.07□□□□□ -0.48
MSRB3-201ENST00000308259 LARP1BQ659C4 914 aaKnown RBP12.07□□□□□ -0.48
MSRB3-201ENST00000308259 FSD1Q9BTV5 496 aa12.07□□□□□ -0.48
MSRB3-201ENST00000308259 FAM200AQ8TCP9 573 aa12.07□□□□□ -0.48
MSRB3-201ENST00000308259 ANKRD24Q8TF21 1146 aa12.07□□□□□ -0.48
MSRB3-201ENST00000308259 DDX11Q96FC9 970 aa12.07□□□□□ -0.48
MSRB3-201ENST00000308259 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
MSRB3-201ENST00000308259 KCNF1Q9H3M0 494 aa12.07□□□□□ -0.48
MSRB3-201ENST00000308259 CEBPZQ03701 1054 aaKnown RBP12.07□□□□□ -0.48
MSRB3-201ENST00000308259 NAA25Q14CX7 972 aa12.07□□□□□ -0.48
MSRB3-201ENST00000308259 CREB3L3Q68CJ9 461 aa12.07□□□□□ -0.48
MSRB3-201ENST00000308259 AOX1Q06278 1338 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms