RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 TCHPQ9BT92 498 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 TBC1D5Q92609 795 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 CUEDC2Q9H467 287 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 AIDAQ96BJ3 306 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 ERICH4A6NGS2 130 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 VAV2P52735 878 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 ARHGAP27Q6ZUM4 889 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 TMOD2Q9NZR1 351 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 NOS1P29475 1434 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 STX10O60499 249 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 GABPB1Q06547 395 aaPredicted RBP4.57□□□□□ -1.68
USH2A-201ENST00000307340 SEPT2Q15019 361 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 ANKARQ7Z5J8 1434 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 BTBD11A6QL63 1104 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 PSMA7O14818 248 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 PXDNLA1KZ92 1463 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 ZNF213O14771 459 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 TMC4Q7Z404 712 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 FAM129AQ9BZQ8 928 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 BCORL1Q5H9F3 1711 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 NAP1L1P55209 391 aaKnown RBP4.57□□□□□ -1.68
USH2A-201ENST00000307340 MAP3K21Q5TCX8 1036 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 NCOA7Q8NI08 942 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 OVOS2A0A0G2JMS6 1433 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 MYH6P13533 1939 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 KIF11P52732 1056 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 MAP3K9P80192 1104 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 HAUS3Q68CZ6 603 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 ECHDC1Q9NTX5 307 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 SRGAP3O43295 1099 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 FERP16591 822 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 FERMT2Q96AC1 680 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 HOMER3Q9NSC5 361 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 KCNJ6P48051 423 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 SMC1BQ8NDV3 1235 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 TMEM87BQ96K49 555 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 DLC1Q96QB1 1528 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 VCXQ9H320 206 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 MYH10P35580 1976 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 TIGD1Q96MW7 591 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 PPCSQ9HAB8 311 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 TRAPPC10P48553 1259 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 ESR2Q92731 530 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 ZNF830Q96NB3 372 aaPredicted RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 RNF216Q9NWF9 866 aaPredicted RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 SLC4A2P04920 1241 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 HSPA4P34932 840 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 SSR1P43307 286 aaKnown RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 IFIT5Q13325 482 aaKnown RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 MAP3K5Q99683 1374 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 TOP1P11387 765 aaKnown RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 PPFIBP2Q8ND30 876 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 FSD2A1L4K1 749 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 NLRP6P59044 892 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 SARNPP82979 210 aaKnown RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 KIFAP3Q92845 792 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 GFM2Q969S9 779 aaKnown RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 C8orf76Q96K31 380 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 SNW1Q13573 536 aaKnown RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 APLFQ8IW19 511 aaPredicted RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 FAM184BQ9ULE4 1060 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 TTF2Q9UNY4 1162 aaKnown RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 RNASELQ05823 741 aaKnown RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 CDK19Q9BWU1 502 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 CFAP70Q5T0N1 1121 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 IMPG2Q9BZV3 1241 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 NAPBQ9H115 298 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 IKBKGQ9Y6K9 419 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 SPATA31E1Q6ZUB1 1445 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 TTC39AQ5SRH9 613 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 MLKLQ8NB16 471 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 C16orf45Q96MC5 204 aaPredicted RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 MMRN2Q9H8L6 949 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 SLC12A7Q9Y666 1083 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 STX6O43752 255 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 LGSNQ5TDP6 509 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 WDR19Q8NEZ3 1342 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 WASLO00401 505 aaPredicted RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 SLC5A1P13866 664 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 DZIP1Q86YF9 867 aaKnown RBP4.56□□□□□ -1.68
USH2A-201ENST00000307340 STIM2Q9P246 746 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 GAS8O95995 478 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 ZNF445P59923 1031 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 TAX1BP1Q86VP1 789 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.56□□□□□ -1.68
USH2A-201ENST00000307340 PDRG1Q9NUG6 133 aa4.56□□□□□ -1.68
USH2A-201ENST00000307340 ATP2A3Q93084 1043 aa4.55□□□□□ -1.68
USH2A-201ENST00000307340 ERVK-7P63135 1459 aa4.55□□□□□ -1.68
USH2A-201ENST00000307340 IL15P40933 162 aaPredicted RBP4.55□□□□□ -1.68
USH2A-201ENST00000307340 CCDC26Q8TAB7 109 aa4.55□□□□□ -1.68
USH2A-201ENST00000307340 PPLO60437 1756 aa4.55□□□□□ -1.68
USH2A-201ENST00000307340 CCDC6Q16204 474 aa4.55□□□□□ -1.68
USH2A-201ENST00000307340 CDAN1Q8IWY9 1227 aa4.55□□□□□ -1.68
USH2A-201ENST00000307340 PSMD1Q99460 953 aa4.55□□□□□ -1.68
USH2A-201ENST00000307340 FAM208AQ9UK61 1670 aaKnown RBP4.55□□□□□ -1.68
USH2A-201ENST00000307340 HLA-DOAP06340 250 aa4.55□□□□□ -1.68
USH2A-201ENST00000307340 KIF5AQ12840 1032 aa4.55□□□□□ -1.68
USH2A-201ENST00000307340 MTMR3Q13615 1198 aa4.55□□□□□ -1.68
USH2A-201ENST00000307340 RPAINQ86UA6 219 aa4.55□□□□□ -1.68
USH2A-201ENST00000307340 PRKAR2BP31323 418 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms