RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 MKRN1Q9UHC7 482 aaKnown RBP33.25■■■□□ 2.91
CDKN2A-201ENST00000304494 KIF16BQ96L93 1317 aa33.25■■■□□ 2.91
CDKN2A-201ENST00000304494 CNTNAP1P78357 1384 aa33.24■■■□□ 2.91
CDKN2A-201ENST00000304494 TAF5LO75529 589 aa33.24■■■□□ 2.91
CDKN2A-201ENST00000304494 HELBQ8NG08 1087 aaPredicted RBP33.24■■■□□ 2.91
CDKN2A-201ENST00000304494 TRAF5O00463 557 aa33.23■■■□□ 2.91
CDKN2A-201ENST00000304494 KLRK1P26718 216 aa33.23■■■□□ 2.91
CDKN2A-201ENST00000304494 STRIP1Q5VSL9 837 aa33.23■■■□□ 2.91
CDKN2A-201ENST00000304494 C15orf52Q6ZUT6 534 aaKnown RBP33.23■■■□□ 2.91
CDKN2A-201ENST00000304494 CDC37L1Q7L3B6 337 aa33.23■■■□□ 2.91
CDKN2A-201ENST00000304494 ZNF280AP59817 542 aaPredicted RBP33.22■■■□□ 2.91
CDKN2A-201ENST00000304494 KIF4BQ2VIQ3 1234 aa33.22■■■□□ 2.91
CDKN2A-201ENST00000304494 RBM26Q5T8P6 1007 aaKnown RBP33.22■■■□□ 2.91
CDKN2A-201ENST00000304494 ANKRD44Q8N8A2 993 aa33.22■■■□□ 2.91
CDKN2A-201ENST00000304494 GMLQ99445 158 aa33.22■■■□□ 2.91
CDKN2A-201ENST00000304494 MYO3BQ8WXR4 1341 aa33.22■■■□□ 2.91
CDKN2A-201ENST00000304494 EGFRP00533 1210 aa33.21■■■□□ 2.91
CDKN2A-201ENST00000304494 USP17L8P0C7I0 530 aa33.21■■■□□ 2.91
CDKN2A-201ENST00000304494 ARHGAP45Q92619 1136 aa33.21■■■□□ 2.91
CDKN2A-201ENST00000304494 FBXW7Q969H0 707 aa33.21■■■□□ 2.91
CDKN2A-201ENST00000304494 GLIS2Q9BZE0 524 aaPredicted RBP33.21■■■□□ 2.91
CDKN2A-201ENST00000304494 ABT1Q9ULW3 272 aaKnown RBP33.21■■■□□ 2.91
CDKN2A-201ENST00000304494 A0A1B0GUL6 1792 aa33.21■■■□□ 2.91
CDKN2A-201ENST00000304494 DACT2Q5SW24 774 aa33.2■■■□□ 2.91
CDKN2A-201ENST00000304494 PLIN1O60240 522 aa33.19■■■□□ 2.9
CDKN2A-201ENST00000304494 FMR1Q06787 632 aaKnown RBP eCLIP33.19■■■□□ 2.9
CDKN2A-201ENST00000304494 IRS2Q9Y4H2 1338 aa33.19■■■□□ 2.9
CDKN2A-201ENST00000304494 SNAP23O00161 211 aa33.18■■■□□ 2.9
CDKN2A-201ENST00000304494 ZNF804AQ7Z570 1209 aa33.18■■■□□ 2.9
CDKN2A-201ENST00000304494 DCPSQ96C86 337 aaKnown RBP33.18■■■□□ 2.9
CDKN2A-201ENST00000304494 CD209Q9NNX6 404 aa33.18■■■□□ 2.9
CDKN2A-201ENST00000304494 RASSF10A6NK89 507 aa33.17■■■□□ 2.9
CDKN2A-201ENST00000304494 CST9Q5W186 159 aa33.17■■■□□ 2.9
CDKN2A-201ENST00000304494 TTLL5Q6EMB2 1281 aa33.17■■■□□ 2.9
CDKN2A-201ENST00000304494 MROH5Q6ZUA9 1318 aa33.17■■■□□ 2.9
CDKN2A-201ENST00000304494 PCNTO95613 3336 aa33.17■■■□□ 2.9
CDKN2A-201ENST00000304494 TRPM7Q96QT4 1865 aa33.16■■■□□ 2.9
CDKN2A-201ENST00000304494 UBTFL1P0CB47 393 aaPredicted RBP33.16■■■□□ 2.9
CDKN2A-201ENST00000304494 DEFB115Q30KQ5 88 aa33.16■■■□□ 2.9
CDKN2A-201ENST00000304494 OGFOD1Q8N543 542 aa33.16■■■□□ 2.9
CDKN2A-201ENST00000304494 MYOZ2Q9NPC6 264 aa33.16■■■□□ 2.9
CDKN2A-201ENST00000304494 HDAC5Q9UQL6 1122 aa33.16■■■□□ 2.9
CDKN2A-201ENST00000304494 IPO8O15397 1037 aaKnown RBP33.15■■■□□ 2.9
CDKN2A-201ENST00000304494 MMP14P50281 582 aa33.15■■■□□ 2.9
CDKN2A-201ENST00000304494 PUS3Q9BZE2 481 aaKnown RBP33.15■■■□□ 2.9
CDKN2A-201ENST00000304494 RIPOR2Q9Y4F9 1068 aa33.15■■■□□ 2.9
CDKN2A-201ENST00000304494 CELF2O95319 508 aaKnown RBP33.14■■■□□ 2.9
CDKN2A-201ENST00000304494 UBE4AQ14139 1066 aa33.14■■■□□ 2.9
CDKN2A-201ENST00000304494 KRT26Q7Z3Y9 468 aa33.14■■■□□ 2.9
CDKN2A-201ENST00000304494 USP48Q86UV5 1035 aa33.14■■■□□ 2.9
CDKN2A-201ENST00000304494 GTF2IP78347 998 aa33.13■■■□□ 2.89
CDKN2A-201ENST00000304494 IL1R1P14778 569 aa33.12■■■□□ 2.89
CDKN2A-201ENST00000304494 VEGFBP49765 207 aa33.12■■■□□ 2.89
CDKN2A-201ENST00000304494 MXD3Q9BW11 206 aa33.12■■■□□ 2.89
CDKN2A-201ENST00000304494 GGA3Q9NZ52 723 aa33.12■■■□□ 2.89
CDKN2A-201ENST00000304494 ZNF646O15015 1829 aaPredicted RBP33.12■■■□□ 2.89
CDKN2A-201ENST00000304494 SCARF1Q14162 830 aa33.11■■■□□ 2.89
CDKN2A-201ENST00000304494 ZNF408Q9H9D4 720 aa33.11■■■□□ 2.89
CDKN2A-201ENST00000304494 TLL2Q9Y6L7 1015 aa33.11■■■□□ 2.89
CDKN2A-201ENST00000304494 ZBED9Q6R2W3 1325 aa33.1■■■□□ 2.89
CDKN2A-201ENST00000304494 METTL24Q5JXM2 366 aa33.1■■■□□ 2.89
CDKN2A-201ENST00000304494 INTS3Q68E01 1043 aaKnown RBP33.1■■■□□ 2.89
CDKN2A-201ENST00000304494 SULF1Q8IWU6 871 aa33.1■■■□□ 2.89
CDKN2A-201ENST00000304494 LRRC24Q50LG9 513 aa33.09■■■□□ 2.89
CDKN2A-201ENST00000304494 HDAC9Q9UKV0 1011 aa33.09■■■□□ 2.89
CDKN2A-201ENST00000304494 BCAR3O75815 825 aa33.08■■■□□ 2.89
CDKN2A-201ENST00000304494 ANGEL2Q5VTE6 544 aaKnown RBP33.07■■■□□ 2.88
CDKN2A-201ENST00000304494 ATF7IPQ6VMQ6 1270 aa33.07■■■□□ 2.88
CDKN2A-201ENST00000304494 KLHDC4Q8TBB5 520 aa33.07■■■□□ 2.88
CDKN2A-201ENST00000304494 FRAT1Q92837 279 aaPredicted RBP33.07■■■□□ 2.88
CDKN2A-201ENST00000304494 PITPNM2Q9BZ72 1349 aa33.06■■■□□ 2.88
CDKN2A-201ENST00000304494 ADM5C9JUS6 153 aa33.06■■■□□ 2.88
CDKN2A-201ENST00000304494 HSPA1AP0DMV8 641 aaKnown RBP33.06■■■□□ 2.88
CDKN2A-201ENST00000304494 HSPA1BP0DMV9 641 aaKnown RBP33.06■■■□□ 2.88
CDKN2A-201ENST00000304494 ECE1P42892 770 aa33.06■■■□□ 2.88
CDKN2A-201ENST00000304494 SAPCD2Q86UD0 394 aa33.06■■■□□ 2.88
CDKN2A-201ENST00000304494 KIAA0825Q8IV33 1275 aa33.06■■■□□ 2.88
CDKN2A-201ENST00000304494 ASTN2O75129 1339 aaPredicted RBP33.05■■■□□ 2.88
CDKN2A-201ENST00000304494 PDE8BO95263 885 aa33.05■■■□□ 2.88
CDKN2A-201ENST00000304494 TRIM27P14373 513 aa33.05■■■□□ 2.88
CDKN2A-201ENST00000304494 HIBADHP31937 336 aaKnown RBP33.05■■■□□ 2.88
CDKN2A-201ENST00000304494 FKBP1AP62942 108 aaKnown RBP33.05■■■□□ 2.88
CDKN2A-201ENST00000304494 PAXIP1Q6ZW49 1069 aaPredicted RBP33.05■■■□□ 2.88
CDKN2A-201ENST00000304494 WDR33Q9C0J8 1336 aaKnown RBP33.04■■■□□ 2.88
CDKN2A-201ENST00000304494 RFX5P48382 616 aaPredicted RBP33.04■■■□□ 2.88
CDKN2A-201ENST00000304494 HHIPL1Q96JK4 782 aa33.04■■■□□ 2.88
CDKN2A-201ENST00000304494 MEIS3Q99687 375 aa33.04■■■□□ 2.88
CDKN2A-201ENST00000304494 SASH1O94885 1247 aa33.03■■■□□ 2.88
CDKN2A-201ENST00000304494 GNAI3P08754 354 aa33.03■■■□□ 2.88
CDKN2A-201ENST00000304494 VGLL2Q8N8G2 317 aa33.03■■■□□ 2.88
CDKN2A-201ENST00000304494 LRRFIP2Q9Y608 721 aaKnown RBP33.03■■■□□ 2.88
CDKN2A-201ENST00000304494 EYA2O00167 538 aa33.02■■■□□ 2.88
CDKN2A-201ENST00000304494 GYG1P46976 350 aa33.02■■■□□ 2.88
CDKN2A-201ENST00000304494 PTPN12Q05209 780 aaKnown RBP33.02■■■□□ 2.88
CDKN2A-201ENST00000304494 FAM84BQ96KN1 310 aaPredicted RBP33.02■■■□□ 2.88
CDKN2A-201ENST00000304494 CAPNS2Q96L46 248 aa33.02■■■□□ 2.88
CDKN2A-201ENST00000304494 NBPF9Q3BBW0 867 aa33.01■■■□□ 2.87
CDKN2A-201ENST00000304494 CAVIN4Q5BKX8 364 aa33.01■■■□□ 2.87
CDKN2A-201ENST00000304494 DLK2Q6UY11 383 aa33.01■■■□□ 2.87
CDKN2A-201ENST00000304494 VPS37DQ86XT2 251 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms