RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 FTOQ9C0B1 505 aaKnown RBP eCLIP13.82□□□□□ -0.2
APLF-201ENST00000303795 CWC25Q9NXE8 425 aaPredicted RBP13.82□□□□□ -0.2
APLF-201ENST00000303795 PPP6R1Q9UPN7 881 aa13.82□□□□□ -0.2
APLF-201ENST00000303795 TAF5LO75529 589 aa13.82□□□□□ -0.2
APLF-201ENST00000303795 TPM4P67936 248 aa13.82□□□□□ -0.2
APLF-201ENST00000303795 FBXO38Q6PIJ6 1188 aa13.82□□□□□ -0.2
APLF-201ENST00000303795 RBM43Q6ZSC3 357 aaKnown RBP13.82□□□□□ -0.2
APLF-201ENST00000303795 ZCRB1Q8TBF4 217 aaKnown RBP13.82□□□□□ -0.2
APLF-201ENST00000303795 RGPD1P0DJD0 1748 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 PSEN1P49768 467 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 ZNF165P49910 485 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 GPS2Q13227 327 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 ME3Q16798 604 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 C10orf67Q8IYJ2 551 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 ANO6Q4KMQ2 910 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 SPECC1Q5M775 1068 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 FAM182BQ5T319 152 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 CPLX3Q8WVH0 158 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 PCMTD1Q96MG8 357 aaPredicted RBP13.81□□□□□ -0.2
APLF-201ENST00000303795 PUS3Q9BZE2 481 aaKnown RBP13.81□□□□□ -0.2
APLF-201ENST00000303795 KLF18A0A0U1RQI7 1052 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 SERPINC1P01008 464 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 ELF2Q15723 593 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 DDX21Q9NR30 783 aaKnown RBP eCLIP13.81□□□□□ -0.2
APLF-201ENST00000303795 ORC3Q9UBD5 711 aaPredicted RBP13.81□□□□□ -0.2
APLF-201ENST00000303795 ZFYVE9O95405 1425 aa13.81□□□□□ -0.2
APLF-201ENST00000303795 FAM208AQ9UK61 1670 aaKnown RBP13.81□□□□□ -0.2
APLF-201ENST00000303795 RANBP6O60518 1105 aaKnown RBP13.8□□□□□ -0.2
APLF-201ENST00000303795 LRRC24Q50LG9 513 aa13.8□□□□□ -0.2
APLF-201ENST00000303795 BEND3Q5T5X7 828 aa13.8□□□□□ -0.2
APLF-201ENST00000303795 C8orf76Q96K31 380 aa13.8□□□□□ -0.2
APLF-201ENST00000303795 UBE2HP62256 183 aa13.8□□□□□ -0.2
APLF-201ENST00000303795 RUFY3Q7L099 469 aa13.8□□□□□ -0.2
APLF-201ENST00000303795 ZNF589Q86UQ0 364 aaPredicted RBP13.8□□□□□ -0.2
APLF-201ENST00000303795 CMTR1Q8N1G2 835 aaKnown RBP13.8□□□□□ -0.2
APLF-201ENST00000303795 ZSCAN31Q96LW9 406 aaPredicted RBP13.8□□□□□ -0.2
APLF-201ENST00000303795 NRBP1Q9UHY1 535 aa13.8□□□□□ -0.2
APLF-201ENST00000303795 SBNO1A3KN83 1393 aa13.8□□□□□ -0.2
APLF-201ENST00000303795 ZNF213O14771 459 aa13.8□□□□□ -0.2
APLF-201ENST00000303795 EPHA10Q5JZY3 1008 aa13.8□□□□□ -0.2
APLF-201ENST00000303795 SLC9C2Q5TAH2 1124 aa13.8□□□□□ -0.2
APLF-201ENST00000303795 YY1AP1Q9H869 796 aa13.8□□□□□ -0.2
APLF-201ENST00000303795 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
APLF-201ENST00000303795 SSH2Q76I76 1423 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 ZRANB2O95218 330 aaKnown RBP eCLIP13.79□□□□□ -0.2
APLF-201ENST00000303795 SAFBQ15424 915 aaKnown RBP eCLIP13.79□□□□□ -0.2
APLF-201ENST00000303795 IMMTQ16891 758 aaKnown RBP13.79□□□□□ -0.2
APLF-201ENST00000303795 SMIM5Q71RC9 77 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 GPIHBP1Q8IV16 184 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 GPATCH11Q8N954 259 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 CCDC171Q6TFL3 1326 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 HNRNPH2P55795 449 aaKnown RBP13.79□□□□□ -0.2
APLF-201ENST00000303795 RAD51AP2Q09MP3 1159 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 DNAJC10Q8IXB1 793 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 TTC14Q96N46 770 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 GJB4Q9NTQ9 266 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 ARGLU1Q9NWB6 273 aaPredicted RBP13.79□□□□□ -0.2
APLF-201ENST00000303795 ST3GAL1Q11201 340 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 ANKRD1Q15327 319 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 CCDC93Q567U6 631 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 TRMT1LQ7Z2T5 733 aaKnown RBP13.79□□□□□ -0.2
APLF-201ENST00000303795 CCAR1Q8IX12 1150 aaKnown RBP13.79□□□□□ -0.2
APLF-201ENST00000303795 UIMC1Q96RL1 719 aa13.79□□□□□ -0.2
APLF-201ENST00000303795 CPSF1Q10570 1443 aaKnown RBP13.78□□□□□ -0.2
APLF-201ENST00000303795 A0A1B0GVL5 298 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 USP27XA6NNY8 438 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 SLC27A2O14975 620 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 PLA2G4AP47712 749 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 TPCN1Q9ULQ1 816 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
APLF-201ENST00000303795 PRDM1O75626 825 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 STARD3NLO95772 234 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
APLF-201ENST00000303795 CCDC144BQ3MJ40 725 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 NAPBQ9H115 298 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 KIDINS220Q9ULH0 1771 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 GCKRQ14397 625 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 MUM1L1Q5H9M0 696 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 PAG1Q9NWQ8 432 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 ZNF215Q9UL58 517 aaPredicted RBP13.78□□□□□ -0.2
APLF-201ENST00000303795 MRVI1Q9Y6F6 885 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 NEO1Q92859 1461 aa13.78□□□□□ -0.2
APLF-201ENST00000303795 A0A1B0GUL7 405 aa13.77□□□□□ -0.2
APLF-201ENST00000303795 CCDC69A6NI79 296 aa13.77□□□□□ -0.2
APLF-201ENST00000303795 LRRN4CLQ8ND94 238 aa13.77□□□□□ -0.2
APLF-201ENST00000303795 ZSWIM4Q9H7M6 989 aa13.77□□□□□ -0.2
APLF-201ENST00000303795 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.2
APLF-201ENST00000303795 IFIT3O14879 490 aaKnown RBP13.77□□□□□ -0.21
APLF-201ENST00000303795 LIG1P18858 919 aa13.77□□□□□ -0.21
APLF-201ENST00000303795 ZSCAN25Q6NSZ9 544 aa13.77□□□□□ -0.21
APLF-201ENST00000303795 SSH3Q8TE77 659 aa13.77□□□□□ -0.21
APLF-201ENST00000303795 ADCY9O60503 1353 aa13.77□□□□□ -0.21
APLF-201ENST00000303795 UBXN4Q92575 508 aa13.77□□□□□ -0.21
APLF-201ENST00000303795 PTPRMP28827 1452 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 GOLGA6L1Q8N7Z2 621 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 ZNF397Q8NF99 534 aaPredicted RBP13.76□□□□□ -0.21
APLF-201ENST00000303795 NEK11Q8NG66 645 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 SIRT1Q96EB6 747 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 FANCGO15287 622 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 CFAP100Q494V2 611 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms