RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 SNX16P57768 344 aa19.01■□□□□ 0.63
PDS5A-201ENST00000303538 RBM27Q9P2N5 1060 aaKnown RBP19.01■□□□□ 0.63
PDS5A-201ENST00000303538 FNBP4Q8N3X1 1017 aaPredicted RBP19.01■□□□□ 0.63
PDS5A-201ENST00000303538 EYA3Q99504 573 aa19.01■□□□□ 0.63
PDS5A-201ENST00000303538 GNG11P61952 73 aa19■□□□□ 0.63
PDS5A-201ENST00000303538 CEP112Q8N8E3 955 aa19■□□□□ 0.63
PDS5A-201ENST00000303538 TRAF3IP1Q8TDR0 691 aaPredicted RBP19■□□□□ 0.63
PDS5A-201ENST00000303538 SRRTQ9BXP5 876 aaKnown RBP19■□□□□ 0.63
PDS5A-201ENST00000303538 TMOD4Q9NZQ9 345 aa19■□□□□ 0.63
PDS5A-201ENST00000303538 ZNF165P49910 485 aa19■□□□□ 0.63
PDS5A-201ENST00000303538 C6orf163Q5TEZ5 329 aa19■□□□□ 0.63
PDS5A-201ENST00000303538 CEP83Q9Y592 693 aa19■□□□□ 0.63
PDS5A-201ENST00000303538 UBASH3AP57075 661 aa19■□□□□ 0.63
PDS5A-201ENST00000303538 TBC1D9Q6ZT07 1266 aa19■□□□□ 0.63
PDS5A-201ENST00000303538 TTC12Q9H892 705 aaPredicted RBP19■□□□□ 0.63
PDS5A-201ENST00000303538 PA2G4Q9UQ80 394 aaKnown RBP19■□□□□ 0.63
PDS5A-201ENST00000303538 IRS4O14654 1257 aaPredicted RBP19■□□□□ 0.63
PDS5A-201ENST00000303538 RXRAP19793 462 aa19■□□□□ 0.63
PDS5A-201ENST00000303538 Q6ZUG5 572 aa19■□□□□ 0.63
PDS5A-201ENST00000303538 TMTC2Q8N394 836 aa19■□□□□ 0.63
PDS5A-201ENST00000303538 SLU7O95391 586 aaKnown RBP18.99■□□□□ 0.63
PDS5A-201ENST00000303538 IL2RBP14784 551 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 RHPN1Q8TCX5 695 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 ZKSCAN3Q9BRR0 538 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 PRDM10Q9NQV6 1147 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 TXNDC16Q9P2K2 825 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 CHMP2AO43633 222 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 CKAP4Q07065 602 aaKnown RBP18.99■□□□□ 0.63
PDS5A-201ENST00000303538 GPCPD1Q9NPB8 672 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 BMS1Q14692 1282 aaKnown RBP18.99■□□□□ 0.63
PDS5A-201ENST00000303538 USP21Q9UK80 565 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 KCNA4P22459 653 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 SNW1Q13573 536 aaKnown RBP18.99■□□□□ 0.63
PDS5A-201ENST00000303538 FCHSD1Q86WN1 690 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 IVNS1ABPQ9Y6Y0 642 aa18.99■□□□□ 0.63
PDS5A-201ENST00000303538 WDR7Q9Y4E6 1490 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 SPECC1LQ69YQ0 1117 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 SMIM23A6NLE4 172 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 KRT79Q5XKE5 535 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 RBM17Q96I25 401 aaKnown RBP18.98■□□□□ 0.63
PDS5A-201ENST00000303538 HMG20BQ9P0W2 317 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 GRM8O00222 908 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 ABCC11Q96J66 1382 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 PLEKHH1Q9ULM0 1364 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 CNGA1P29973 690 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 GIMAP6Q6P9H5 292 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 SUPT6HQ7KZ85 1726 aaKnown RBP18.98■□□□□ 0.63
PDS5A-201ENST00000303538 SORBS3O60504 671 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 ZWINTO95229 277 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 KIF4AO95239 1232 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 KRT5P13647 590 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 SELENOOQ9BVL4 669 aa18.98■□□□□ 0.63
PDS5A-201ENST00000303538 MCMDC2Q4G0Z9 681 aa18.97■□□□□ 0.63
PDS5A-201ENST00000303538 MAK16Q9BXY0 300 aaKnown RBP18.97■□□□□ 0.63
PDS5A-201ENST00000303538 CCNL1Q9UK58 526 aaPredicted RBP18.97■□□□□ 0.63
PDS5A-201ENST00000303538 ADCY5O95622 1261 aa18.97■□□□□ 0.63
PDS5A-201ENST00000303538 DCAF17Q5H9S7 520 aaPredicted RBP18.97■□□□□ 0.63
PDS5A-201ENST00000303538 HSF2BPO75031 334 aa18.97■□□□□ 0.63
PDS5A-201ENST00000303538 ZFYP08048 801 aaPredicted RBP18.97■□□□□ 0.63
PDS5A-201ENST00000303538 MICALCLQ6ZW33 695 aa18.97■□□□□ 0.63
PDS5A-201ENST00000303538 TIGD1Q96MW7 591 aa18.97■□□□□ 0.63
PDS5A-201ENST00000303538 NACA2Q9H009 215 aa18.97■□□□□ 0.63
PDS5A-201ENST00000303538 FAM169AQ9Y6X4 670 aa18.97■□□□□ 0.63
PDS5A-201ENST00000303538 TRIM6Q9C030 488 aaPredicted RBP18.97■□□□□ 0.63
PDS5A-201ENST00000303538 GSDMDP57764 484 aa18.96■□□□□ 0.63
PDS5A-201ENST00000303538 UIMC1Q96RL1 719 aa18.96■□□□□ 0.63
PDS5A-201ENST00000303538 CFAP58Q5T655 872 aa18.96■□□□□ 0.63
PDS5A-201ENST00000303538 HS2ST1Q7LGA3 356 aa18.96■□□□□ 0.63
PDS5A-201ENST00000303538 PSMA7O14818 248 aa18.96■□□□□ 0.63
PDS5A-201ENST00000303538 KRT9P35527 623 aa18.96■□□□□ 0.63
PDS5A-201ENST00000303538 MAEAQ7L5Y9 396 aa18.96■□□□□ 0.63
PDS5A-201ENST00000303538 BIRC3Q13489 604 aa18.96■□□□□ 0.63
PDS5A-201ENST00000303538 PAG1Q9NWQ8 432 aa18.96■□□□□ 0.63
PDS5A-201ENST00000303538 MYCLP12524 364 aaPredicted RBP18.96■□□□□ 0.62
PDS5A-201ENST00000303538 PLCG2P16885 1265 aa18.96■□□□□ 0.62
PDS5A-201ENST00000303538 MAP7D1Q3KQU3 841 aa18.96■□□□□ 0.62
PDS5A-201ENST00000303538 SPATA24Q86W54 205 aa18.96■□□□□ 0.62
PDS5A-201ENST00000303538 SMC1BQ8NDV3 1235 aa18.96■□□□□ 0.62
PDS5A-201ENST00000303538 MEIS3Q99687 375 aa18.96■□□□□ 0.62
PDS5A-201ENST00000303538 NOP56O00567 594 aaKnown RBP18.95■□□□□ 0.62
PDS5A-201ENST00000303538 UFL1O94874 794 aa18.95■□□□□ 0.62
PDS5A-201ENST00000303538 IRX5P78411 483 aaPredicted RBP18.95■□□□□ 0.62
PDS5A-201ENST00000303538 RBM8AQ9Y5S9 174 aaKnown RBP18.95■□□□□ 0.62
PDS5A-201ENST00000303538 NKTRP30414 1462 aaKnown RBP18.95■□□□□ 0.62
PDS5A-201ENST00000303538 CCDC169A6NNP5 214 aa18.95■□□□□ 0.62
PDS5A-201ENST00000303538 CCDC6Q16204 474 aa18.95■□□□□ 0.62
PDS5A-201ENST00000303538 CYLC1P35663 651 aaPredicted RBP18.95■□□□□ 0.62
PDS5A-201ENST00000303538 TNPO1Q92973 898 aaKnown RBP18.95■□□□□ 0.62
PDS5A-201ENST00000303538 NOS1P29475 1434 aa18.95■□□□□ 0.62
PDS5A-201ENST00000303538 CCDC25Q86WR0 208 aa18.95■□□□□ 0.62
PDS5A-201ENST00000303538 GEN1Q17RS7 908 aa18.94■□□□□ 0.62
PDS5A-201ENST00000303538 ZSCAN30Q86W11 494 aa18.94■□□□□ 0.62
PDS5A-201ENST00000303538 STX17P56962 302 aa18.94■□□□□ 0.62
PDS5A-201ENST00000303538 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
PDS5A-201ENST00000303538 TCIRG1Q13488 830 aa18.94■□□□□ 0.62
PDS5A-201ENST00000303538 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
PDS5A-201ENST00000303538 RASAL2Q9UJF2 1139 aa18.94■□□□□ 0.62
PDS5A-201ENST00000303538 DDX39AO00148 427 aaKnown RBP18.94■□□□□ 0.62
PDS5A-201ENST00000303538 BRDTQ58F21 947 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms