RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 DCAF8Q5TAQ9 597 aa30.22■■■□□ 2.43
HOXC9-201ENST00000303450 NIM1KQ8IY84 436 aa30.22■■■□□ 2.43
HOXC9-201ENST00000303450 LPIN2Q92539 896 aa30.22■■■□□ 2.43
HOXC9-201ENST00000303450 CHD4Q14839 1912 aa30.21■■■□□ 2.43
HOXC9-201ENST00000303450 DICER1Q9UPY3 1922 aaKnown RBP30.21■■■□□ 2.43
HOXC9-201ENST00000303450 FGFR2P21802 821 aa30.21■■■□□ 2.43
HOXC9-201ENST00000303450 TXNRD3Q86VQ6 643 aa30.21■■■□□ 2.43
HOXC9-201ENST00000303450 C15orf52Q6ZUT6 534 aaKnown RBP30.2■■■□□ 2.42
HOXC9-201ENST00000303450 RHPN1Q8TCX5 695 aa30.2■■■□□ 2.42
HOXC9-201ENST00000303450 KIF1BPQ96EK5 621 aa30.2■■■□□ 2.42
HOXC9-201ENST00000303450 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.2■■■□□ 2.42
HOXC9-201ENST00000303450 DOK7Q18PE1 504 aa30.19■■■□□ 2.42
HOXC9-201ENST00000303450 DBNDD1Q9H9R9 158 aa30.18■■■□□ 2.42
HOXC9-201ENST00000303450 IRS2Q9Y4H2 1338 aa30.18■■■□□ 2.42
HOXC9-201ENST00000303450 TIMM10P62072 90 aa30.17■■■□□ 2.42
HOXC9-201ENST00000303450 GPR108Q9NPR9 543 aa30.17■■■□□ 2.42
HOXC9-201ENST00000303450 COL4A5P29400 1685 aa30.17■■■□□ 2.42
HOXC9-201ENST00000303450 A0A1B0GUL7 405 aa30.17■■■□□ 2.42
HOXC9-201ENST00000303450 ZNF804AQ7Z570 1209 aa30.17■■■□□ 2.42
HOXC9-201ENST00000303450 NEUROD6Q96NK8 337 aa30.17■■■□□ 2.42
HOXC9-201ENST00000303450 TNNI3KQ59H18 835 aa30.16■■■□□ 2.42
HOXC9-201ENST00000303450 CAVIN4Q5BKX8 364 aa30.16■■■□□ 2.42
HOXC9-201ENST00000303450 LRRCC1Q9C099 1032 aa30.16■■■□□ 2.42
HOXC9-201ENST00000303450 COA1Q9GZY4 146 aa30.16■■■□□ 2.42
HOXC9-201ENST00000303450 ZNRF3Q9ULT6 936 aa30.16■■■□□ 2.42
HOXC9-201ENST00000303450 FPGT-TNNI3KV9GXZ4 949 aa30.16■■■□□ 2.42
HOXC9-201ENST00000303450 ECE2O60344 883 aa30.15■■■□□ 2.42
HOXC9-201ENST00000303450 IGHDP01880 384 aa30.15■■■□□ 2.42
HOXC9-201ENST00000303450 GYG1P46976 350 aa30.15■■■□□ 2.42
HOXC9-201ENST00000303450 VPS37DQ86XT2 251 aa30.15■■■□□ 2.42
HOXC9-201ENST00000303450 GCC1Q96CN9 775 aa30.15■■■□□ 2.42
HOXC9-201ENST00000303450 FAM84BQ96KN1 310 aaPredicted RBP30.15■■■□□ 2.42
HOXC9-201ENST00000303450 IL1RAPL2Q9NP60 686 aa30.15■■■□□ 2.42
HOXC9-201ENST00000303450 HIBADHP31937 336 aaKnown RBP30.14■■■□□ 2.42
HOXC9-201ENST00000303450 BCL11AQ9H165 835 aa30.14■■■□□ 2.42
HOXC9-201ENST00000303450 ZNF609O15014 1411 aa30.14■■■□□ 2.42
HOXC9-201ENST00000303450 TIAM2Q8IVF5 1701 aa30.14■■■□□ 2.42
HOXC9-201ENST00000303450 CLASRPQ8N2M8 674 aaKnown RBP30.13■■■□□ 2.41
HOXC9-201ENST00000303450 FZD9O00144 591 aa30.12■■■□□ 2.41
HOXC9-201ENST00000303450 PODNQ7Z5L7 613 aa30.12■■■□□ 2.41
HOXC9-201ENST00000303450 XAGE2Q96GT9 111 aa30.12■■■□□ 2.41
HOXC9-201ENST00000303450 ZC3H4Q9UPT8 1303 aaKnown RBP30.12■■■□□ 2.41
HOXC9-201ENST00000303450 ADORA1P30542 326 aa30.12■■■□□ 2.41
HOXC9-201ENST00000303450 BCAMP50895 628 aa30.12■■■□□ 2.41
HOXC9-201ENST00000303450 EIF6P56537 245 aaKnown RBP30.12■■■□□ 2.41
HOXC9-201ENST00000303450 CD209Q9NNX6 404 aa30.12■■■□□ 2.41
HOXC9-201ENST00000303450 GORABQ5T7V8 394 aa30.11■■■□□ 2.41
HOXC9-201ENST00000303450 FBXO33Q7Z6M2 555 aa30.11■■■□□ 2.41
HOXC9-201ENST00000303450 AACSQ86V21 672 aa30.11■■■□□ 2.41
HOXC9-201ENST00000303450 EAF2Q96CJ1 260 aaPredicted RBP30.11■■■□□ 2.41
HOXC9-201ENST00000303450 YDJCA8MPS7 323 aa30.1■■■□□ 2.41
HOXC9-201ENST00000303450 ARAP2Q8WZ64 1704 aa30.09■■■□□ 2.41
HOXC9-201ENST00000303450 SMARCA5O60264 1052 aaPredicted RBP30.09■■■□□ 2.41
HOXC9-201ENST00000303450 CCDC8Q9H0W5 538 aaPredicted RBP30.09■■■□□ 2.41
HOXC9-201ENST00000303450 ZBTB47Q9UFB7 747 aaPredicted RBP30.09■■■□□ 2.41
HOXC9-201ENST00000303450 IL1R1P14778 569 aa30.07■■■□□ 2.4
HOXC9-201ENST00000303450 ERICH6BQ5W0A0 696 aa30.07■■■□□ 2.4
HOXC9-201ENST00000303450 SMC5Q8IY18 1101 aa30.07■■■□□ 2.4
HOXC9-201ENST00000303450 GNL3LQ9NVN8 582 aaKnown RBP30.07■■■□□ 2.4
HOXC9-201ENST00000303450 FRAT2O75474 233 aaPredicted RBP30.06■■■□□ 2.4
HOXC9-201ENST00000303450 RAD17O75943 681 aa30.06■■■□□ 2.4
HOXC9-201ENST00000303450 IFIT2P09913 472 aaKnown RBP30.06■■■□□ 2.4
HOXC9-201ENST00000303450 ANKRD45Q5TZF3 282 aa30.06■■■□□ 2.4
HOXC9-201ENST00000303450 CCDC102BQ68D86 513 aa30.06■■■□□ 2.4
HOXC9-201ENST00000303450 DBNDD2Q9BQY9 259 aa30.06■■■□□ 2.4
HOXC9-201ENST00000303450 KCNQ5Q9NR82 932 aa30.06■■■□□ 2.4
HOXC9-201ENST00000303450 ZNF541Q9H0D2 1346 aa30.06■■■□□ 2.4
HOXC9-201ENST00000303450 CXCL9Q07325 125 aa30.06■■■□□ 2.4
HOXC9-201ENST00000303450 DPY19L2Q6NUT2 758 aa30.06■■■□□ 2.4
HOXC9-201ENST00000303450 IQSEC3Q9UPP2 1182 aaPredicted RBP30.06■■■□□ 2.4
HOXC9-201ENST00000303450 PHKA1P46020 1223 aa30.05■■■□□ 2.4
HOXC9-201ENST00000303450 TNIP1Q15025 636 aa30.05■■■□□ 2.4
HOXC9-201ENST00000303450 CIAPIN1Q6FI81 312 aa30.05■■■□□ 2.4
HOXC9-201ENST00000303450 TDRD7Q8NHU6 1098 aaKnown RBP30.05■■■□□ 2.4
HOXC9-201ENST00000303450 FBXW7Q969H0 707 aa30.05■■■□□ 2.4
HOXC9-201ENST00000303450 DBNLQ9UJU6 430 aaKnown RBP30.05■■■□□ 2.4
HOXC9-201ENST00000303450 SCN9AQ15858 1988 aa30.04■■■□□ 2.4
HOXC9-201ENST00000303450 TLR7Q9NYK1 1049 aaKnown RBP30.04■■■□□ 2.4
HOXC9-201ENST00000303450 CCDC158Q5M9N0 1113 aa30.03■■■□□ 2.4
HOXC9-201ENST00000303450 B4GALNT3Q6L9W6 998 aa30.03■■■□□ 2.4
HOXC9-201ENST00000303450 USP17L3A6NCW0 530 aa30.02■■■□□ 2.4
HOXC9-201ENST00000303450 USP17L4A6NCW7 530 aa30.02■■■□□ 2.4
HOXC9-201ENST00000303450 USP17L1Q7RTZ2 530 aa30.02■■■□□ 2.4
HOXC9-201ENST00000303450 GJA3Q9Y6H8 435 aa30.02■■■□□ 2.4
HOXC9-201ENST00000303450 PSMD14O00487 310 aa30.01■■■□□ 2.4
HOXC9-201ENST00000303450 GTF2IP78347 998 aa30.01■■■□□ 2.4
HOXC9-201ENST00000303450 TTLL5Q6EMB2 1281 aa30.01■■■□□ 2.4
HOXC9-201ENST00000303450 CCDC136Q96JN2 1154 aa30.01■■■□□ 2.4
HOXC9-201ENST00000303450 GLTPD2A6NH11 291 aa30.01■■■□□ 2.39
HOXC9-201ENST00000303450 TTC39AQ5SRH9 613 aa30.01■■■□□ 2.39
HOXC9-201ENST00000303450 STRIP1Q5VSL9 837 aa30.01■■■□□ 2.39
HOXC9-201ENST00000303450 GPC2Q8N158 579 aa30.01■■■□□ 2.39
HOXC9-201ENST00000303450 DDNO94850 711 aaPredicted RBP29.99■■■□□ 2.39
HOXC9-201ENST00000303450 JAG2Q9Y219 1238 aa29.99■■■□□ 2.39
HOXC9-201ENST00000303450 PSME4Q14997 1843 aa29.99■■■□□ 2.39
HOXC9-201ENST00000303450 SEMA3EO15041 775 aa29.98■■■□□ 2.39
HOXC9-201ENST00000303450 VIL1P09327 827 aaKnown RBP29.98■■■□□ 2.39
HOXC9-201ENST00000303450 UQCRFS1P1P0C7P4 283 aa29.98■■■□□ 2.39
HOXC9-201ENST00000303450 CHAF1AQ13111 956 aaPredicted RBP29.98■■■□□ 2.39
HOXC9-201ENST00000303450 DENND2AQ9ULE3 1009 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms