RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 F13A1P00488 732 aa5.95□□□□□ -1.46
SCN1A-201ENST00000303395 TSNAXIP1Q2TAA8 658 aa5.95□□□□□ -1.46
SCN1A-201ENST00000303395 RETREG2Q8NC44 543 aa5.95□□□□□ -1.46
SCN1A-201ENST00000303395 SYTL4Q96C24 671 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-201ENST00000303395 ACTR5Q9H9F9 607 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-201ENST00000303395 A2ML1A8K2U0 1454 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 TTC36A6NLP5 189 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 FIBPO43427 364 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 ANXA13P27216 316 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 CACYBPQ9HB71 228 aaKnown RBP5.94□□□□□ -1.46
SCN1A-201ENST00000303395 PRG4Q92954 1404 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-201ENST00000303395 GNAT2P19087 354 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 PSME1Q06323 249 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 TNIP1Q15025 636 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 LARP1Q6PKG0 1096 aaKnown RBP5.94□□□□□ -1.46
SCN1A-201ENST00000303395 SARM1Q6SZW1 724 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 LMNTD2Q8IXW0 634 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 MLKLQ8NB16 471 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 SCLT1Q96NL6 688 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 TUBB6Q9BUF5 446 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 TSPYL4Q9UJ04 414 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 HNRNPCL1O60812 293 aaKnown RBP5.94□□□□□ -1.46
SCN1A-201ENST00000303395 HSF2BPO75031 334 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 BATF3Q9NR55 127 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 CDK12Q9NYV4 1490 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-201ENST00000303395 ARL1P40616 181 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-201ENST00000303395 EXOSC9Q06265 439 aaKnown RBP5.94□□□□□ -1.46
SCN1A-201ENST00000303395 CCDC174Q6PII3 467 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 PARP2Q9UGN5 583 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 ZNF521Q96K83 1311 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 IBSPP21815 317 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-201ENST00000303395 ZBTB17Q13105 803 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 NBPF20Q3BBV1 942 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 FNBP4Q8N3X1 1017 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-201ENST00000303395 FAM76AQ8TAV0 307 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 SELENOOQ9BVL4 669 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 LUC7L2Q9Y383 392 aaKnown RBP5.94□□□□□ -1.46
SCN1A-201ENST00000303395 TACC1O75410 805 aa5.94□□□□□ -1.46
SCN1A-201ENST00000303395 IKBKBO14920 756 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 HSPA6P17066 643 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 CA8P35219 290 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 RSPH3Q86UC2 560 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 CCDC84Q86UT8 332 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 ANAPC4Q9UJX5 808 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 FRMPD1Q5SYB0 1578 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 TET3O43151 1660 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 GSTTP1A0A1W2PQM5 241 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 SEMA3EO15041 775 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 MAIP1Q8WWC4 291 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 MAML3Q96JK9 1138 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 VIPAS39Q9H9C1 493 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 PNMA2Q9UL42 364 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 MAP3K5Q99683 1374 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 A0A087WUV0 522 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 SKILP12757 684 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 CALML3P27482 149 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 CFAP100Q494V2 611 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 HSP90AA5PQ58FG0 334 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 TBC1D9Q6ZT07 1266 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 BPIFA3Q9BQP9 254 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 SPTLC3Q9NUV7 552 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 RABGAP1Q9Y3P9 1069 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 ABCC12Q96J65 1359 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 A0A087WZG4 1122 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 ATP2A1O14983 1001 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 KIF5BP33176 963 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 NMIQ13287 307 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 ORC2Q13416 577 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 MLECQ14165 292 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 MUM1L1Q5H9M0 696 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 SMYD5Q6GMV2 418 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 ELOA2Q8IYF1 753 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 ZBTB40Q9NUA8 1239 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 WDR19Q8NEZ3 1342 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 BRD1O95696 1058 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 ITIH3Q06033 890 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 KLHL10Q6JEL2 608 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 NGDNQ8NEJ9 315 aaKnown RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 ALDH8A1Q9H2A2 487 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 TRAK1Q9UPV9 953 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 CCDC61Q9Y6R9 512 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 PBRM1Q86U86 1689 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 LACTBP83111 547 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 DEUP1Q05D60 604 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 CNOT10Q9H9A5 744 aaKnown RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 FAM184BQ9ULE4 1060 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 LRRFIP2Q9Y608 721 aaKnown RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 EDC4Q6P2E9 1401 aaKnown RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 GMNNO75496 209 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 TRIM27P14373 513 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 ZKSCAN8Q15776 578 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 RILPL1Q5EBL4 403 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 NBPF10Q6P3W6 841 aaKnown RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 CCDC82Q8N4S0 544 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 TDRD7Q8NHU6 1098 aaKnown RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 CCDC114Q96M63 670 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 TRIM7Q9C029 511 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 CLSTN2Q9H4D0 955 aa5.93□□□□□ -1.46
SCN1A-201ENST00000303395 NOB1Q9ULX3 412 aaKnown RBP5.93□□□□□ -1.46
SCN1A-201ENST00000303395 NEO1Q92859 1461 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms