RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ZAP70P43403 619 aa15.7■□□□□ 0.1
CCDC7-202ENST00000302316 PI16Q6UXB8 463 aa15.7■□□□□ 0.1
CCDC7-202ENST00000302316 ANTXR1Q9H6X2 564 aa15.7■□□□□ 0.1
CCDC7-202ENST00000302316 KIAA1211Q6ZU35 1233 aa15.69■□□□□ 0.1
CCDC7-202ENST00000302316 MCCP23508 829 aa15.68■□□□□ 0.1
CCDC7-202ENST00000302316 EPB41L2O43491 1005 aaKnown RBP15.68■□□□□ 0.1
CCDC7-202ENST00000302316 HOXA10P31260 410 aaPredicted RBP15.68■□□□□ 0.1
CCDC7-202ENST00000302316 BCAMP50895 628 aa15.68■□□□□ 0.1
CCDC7-202ENST00000302316 AKAP11Q9UKA4 1901 aa15.68■□□□□ 0.1
CCDC7-202ENST00000302316 WTIPA6NIX2 430 aaPredicted RBP15.67■□□□□ 0.1
CCDC7-202ENST00000302316 PDE6BP35913 854 aa15.67■□□□□ 0.1
CCDC7-202ENST00000302316 TICAM2Q86XR7 235 aa15.67■□□□□ 0.1
CCDC7-202ENST00000302316 CRAMP1Q96RY5 1269 aa15.67■□□□□ 0.1
CCDC7-202ENST00000302316 LSG1Q9H089 658 aaKnown RBP15.67■□□□□ 0.1
CCDC7-202ENST00000302316 MED23Q9ULK4 1368 aa15.67■□□□□ 0.1
CCDC7-202ENST00000302316 CHGBP05060 677 aa15.67■□□□□ 0.1
CCDC7-202ENST00000302316 RASGRF1Q13972 1273 aa15.67■□□□□ 0.1
CCDC7-202ENST00000302316 LRRFIP1Q32MZ4 808 aaKnown RBP15.67■□□□□ 0.1
CCDC7-202ENST00000302316 CAVIN4Q5BKX8 364 aa15.67■□□□□ 0.1
CCDC7-202ENST00000302316 KIF2CQ99661 725 aa15.67■□□□□ 0.1
CCDC7-202ENST00000302316 PDGFDQ9GZP0 370 aaPredicted RBP15.67■□□□□ 0.1
CCDC7-202ENST00000302316 HMG20BQ9P0W2 317 aa15.67■□□□□ 0.1
CCDC7-202ENST00000302316 ANKIB1Q9P2G1 1089 aa15.67■□□□□ 0.1
CCDC7-202ENST00000302316 ZNF804BA4D1E1 1349 aa15.66■□□□□ 0.1
CCDC7-202ENST00000302316 CYP2E1P05181 493 aaPredicted RBP15.66■□□□□ 0.1
CCDC7-202ENST00000302316 GYG1P46976 350 aa15.66■□□□□ 0.1
CCDC7-202ENST00000302316 TTF1Q15361 905 aaPredicted RBP15.66■□□□□ 0.1
CCDC7-202ENST00000302316 SLC51AQ86UW1 340 aa15.66■□□□□ 0.1
CCDC7-202ENST00000302316 SPATA5Q8NB90 893 aa15.66■□□□□ 0.1
CCDC7-202ENST00000302316 COL11A2P13942 1736 aaPredicted RBP15.66■□□□□ 0.1
CCDC7-202ENST00000302316 XDHP47989 1333 aa15.66■□□□□ 0.1
CCDC7-202ENST00000302316 BBOX1O75936 387 aa15.65■□□□□ 0.1
CCDC7-202ENST00000302316 VPS37DQ86XT2 251 aa15.65■□□□□ 0.1
CCDC7-202ENST00000302316 GNL3LQ9NVN8 582 aaKnown RBP15.65■□□□□ 0.1
CCDC7-202ENST00000302316 DAXXQ9UER7 740 aaPredicted RBP15.65■□□□□ 0.1
CCDC7-202ENST00000302316 CCDC171Q6TFL3 1326 aa15.65■□□□□ 0.1
CCDC7-202ENST00000302316 RNF113AO15541 343 aaKnown RBP15.65■□□□□ 0.1
CCDC7-202ENST00000302316 SRGNP10124 158 aa15.65■□□□□ 0.1
CCDC7-202ENST00000302316 NPR1P16066 1061 aa15.65■□□□□ 0.1
CCDC7-202ENST00000302316 KLRK1P26718 216 aa15.65■□□□□ 0.1
CCDC7-202ENST00000302316 BECN1Q14457 450 aa15.65■□□□□ 0.1
CCDC7-202ENST00000302316 ZNF589Q86UQ0 364 aaPredicted RBP15.65■□□□□ 0.1
CCDC7-202ENST00000302316 PPEF1O14829 653 aaPredicted RBP15.64■□□□□ 0.09
CCDC7-202ENST00000302316 SEC62Q99442 399 aaKnown RBP15.64■□□□□ 0.09
CCDC7-202ENST00000302316 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.64■□□□□ 0.09
CCDC7-202ENST00000302316 ZFYP08048 801 aaPredicted RBP15.64■□□□□ 0.09
CCDC7-202ENST00000302316 PTH1RQ03431 593 aa15.64■□□□□ 0.09
CCDC7-202ENST00000302316 MCMDC2Q4G0Z9 681 aa15.64■□□□□ 0.09
CCDC7-202ENST00000302316 TMC4Q7Z404 712 aa15.64■□□□□ 0.09
CCDC7-202ENST00000302316 FAM84BQ96KN1 310 aaPredicted RBP15.64■□□□□ 0.09
CCDC7-202ENST00000302316 PIH1D3Q9NQM4 214 aaKnown RBP15.64■□□□□ 0.09
CCDC7-202ENST00000302316 HELLSQ9NRZ9 838 aa15.64■□□□□ 0.09
CCDC7-202ENST00000302316 IQSEC3Q9UPP2 1182 aaPredicted RBP15.64■□□□□ 0.09
CCDC7-202ENST00000302316 LEMD3Q9Y2U8 911 aa15.64■□□□□ 0.09
CCDC7-202ENST00000302316 IDH1O75874 414 aaKnown RBP15.63■□□□□ 0.09
CCDC7-202ENST00000302316 GPSM2P81274 684 aa15.63■□□□□ 0.09
CCDC7-202ENST00000302316 SLFNL1Q499Z3 407 aa15.63■□□□□ 0.09
CCDC7-202ENST00000302316 ZMYM1Q5SVZ6 1142 aa15.63■□□□□ 0.09
CCDC7-202ENST00000302316 MASTLQ96GX5 879 aa15.63■□□□□ 0.09
CCDC7-202ENST00000302316 LRRC37AA6NMS7 1700 aa15.63■□□□□ 0.09
CCDC7-202ENST00000302316 HSPA4P34932 840 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 RABEP1Q15276 862 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 ZSCAN25Q6NSZ9 544 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 CCDC129Q6ZRS4 1044 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 SLC16A10Q8TF71 515 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 PALD1Q9ULE6 856 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 NSFL1CQ9UNZ2 370 aaKnown RBP15.62■□□□□ 0.09
CCDC7-202ENST00000302316 MYH7P12883 1935 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 ALDH1B1P30837 517 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 HIBADHP31937 336 aaKnown RBP15.62■□□□□ 0.09
CCDC7-202ENST00000302316 SLC4A3P48751 1232 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 ANAPC15P60006 121 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 FBXO33Q7Z6M2 555 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 C2CD5Q86YS7 1000 aa15.62■□□□□ 0.09
CCDC7-202ENST00000302316 COL1A1P02452 1464 aaPredicted RBP15.62■□□□□ 0.09
CCDC7-202ENST00000302316 UFL1O94874 794 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 WASHC4Q2M389 1173 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 TBC1D2Q9BYX2 928 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 GGA1Q9UJY5 639 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 MAST3O60307 1309 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 H0YIN7 160 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 FRAT2O75474 233 aaPredicted RBP15.61■□□□□ 0.09
CCDC7-202ENST00000302316 ATP2B4P23634 1241 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 SLC9C2Q5TAH2 1124 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 HSCBQ8IWL3 235 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 DOCK2Q92608 1830 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 APPBP2Q92624 585 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 ZNF622Q969S3 477 aaKnown RBP eCLIP15.61■□□□□ 0.09
CCDC7-202ENST00000302316 DENND2AQ9ULE3 1009 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 IRS2Q9Y4H2 1338 aa15.61■□□□□ 0.09
CCDC7-202ENST00000302316 RBM8AQ9Y5S9 174 aaKnown RBP15.61■□□□□ 0.09
CCDC7-202ENST00000302316 SEMA3EO15041 775 aa15.6■□□□□ 0.09
CCDC7-202ENST00000302316 ADD2P35612 726 aa15.6■□□□□ 0.09
CCDC7-202ENST00000302316 TXNRD3Q86VQ6 643 aa15.6■□□□□ 0.09
CCDC7-202ENST00000302316 SP8Q8IXZ3 490 aa15.6■□□□□ 0.09
CCDC7-202ENST00000302316 MAP4K1Q92918 833 aa15.6■□□□□ 0.09
CCDC7-202ENST00000302316 ATP6V0A2Q9Y487 856 aa15.6■□□□□ 0.09
CCDC7-202ENST00000302316 M0R2C6 588 aa15.59■□□□□ 0.09
CCDC7-202ENST00000302316 MAP3K12Q12852 859 aa15.59■□□□□ 0.09
CCDC7-202ENST00000302316 PRPF40BQ6NWY9 871 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms