RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
SDC2-201ENST00000302190 ABCF2Q9UG63 623 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 PTPDC1A2A3K4 754 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 RIOK3O14730 519 aaKnown RBP16.38■□□□□ 0.21
SDC2-201ENST00000302190 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
SDC2-201ENST00000302190 NR1I2O75469 434 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 ZNF790Q6PG37 636 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 HELBQ8NG08 1087 aaPredicted RBP16.38■□□□□ 0.21
SDC2-201ENST00000302190 PI4K2BQ8TCG2 481 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 IPO4Q8TEX9 1081 aaKnown RBP16.38■□□□□ 0.21
SDC2-201ENST00000302190 CBX8Q9HC52 389 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 PYCARDQ9ULZ3 195 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 TBC1D2BQ9UPU7 963 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 ERICH2A1L162 156 aa16.37■□□□□ 0.21
SDC2-201ENST00000302190 GTPBP4Q9BZE4 634 aaKnown RBP16.37■□□□□ 0.21
SDC2-201ENST00000302190 STAP2Q9UGK3 403 aa16.37■□□□□ 0.21
SDC2-201ENST00000302190 ROBO1Q9Y6N7 1651 aa16.37■□□□□ 0.21
SDC2-201ENST00000302190 CYP27B1O15528 508 aa16.37■□□□□ 0.21
SDC2-201ENST00000302190 RPS6KB1P23443 525 aa16.37■□□□□ 0.21
SDC2-201ENST00000302190 IFNL2Q8IZJ0 200 aa16.37■□□□□ 0.21
SDC2-201ENST00000302190 KDRP35968 1356 aa16.37■□□□□ 0.21
SDC2-201ENST00000302190 SLC4A8Q2Y0W8 1093 aa16.37■□□□□ 0.21
SDC2-201ENST00000302190 LEO1Q8WVC0 666 aaPredicted RBP16.37■□□□□ 0.21
SDC2-201ENST00000302190 TRERF1Q96PN7 1200 aa16.37■□□□□ 0.21
SDC2-201ENST00000302190 ANO10Q9NW15 660 aa16.37■□□□□ 0.21
SDC2-201ENST00000302190 SFPQP23246 707 aaKnown RBP eCLIP16.36■□□□□ 0.212e-6■■■□□ 14.6
SDC2-201ENST00000302190 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
SDC2-201ENST00000302190 ZNF213O14771 459 aa16.36■□□□□ 0.21
SDC2-201ENST00000302190 ZSCAN20P17040 1043 aaPredicted RBP16.36■□□□□ 0.21
SDC2-201ENST00000302190 A1BGP04217 495 aa16.36■□□□□ 0.21
SDC2-201ENST00000302190 NGLY1Q96IV0 654 aa16.36■□□□□ 0.21
SDC2-201ENST00000302190 CRB1P82279 1406 aa16.35■□□□□ 0.21
SDC2-201ENST00000302190 KIF24Q5T7B8 1368 aa16.35■□□□□ 0.21
SDC2-201ENST00000302190 U2AF2P26368 475 aaKnown RBP eCLIP16.35■□□□□ 0.212e-6■■■■□ 19.7
SDC2-201ENST00000302190 LDHAL6AQ6ZMR3 332 aa16.35■□□□□ 0.21
SDC2-201ENST00000302190 CPLX3Q8WVH0 158 aa16.35■□□□□ 0.21
SDC2-201ENST00000302190 PAG1Q9NWQ8 432 aa16.35■□□□□ 0.21
SDC2-201ENST00000302190 CAMTA1Q9Y6Y1 1673 aa16.35■□□□□ 0.21
SDC2-201ENST00000302190 NCOA3Q9Y6Q9 1424 aa16.35■□□□□ 0.21
SDC2-201ENST00000302190 CYP2E1P05181 493 aaPredicted RBP16.35■□□□□ 0.21
SDC2-201ENST00000302190 ZSWIM4Q9H7M6 989 aa16.35■□□□□ 0.21
SDC2-201ENST00000302190 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
SDC2-201ENST00000302190 SLC3A2P08195 630 aaKnown RBP16.35■□□□□ 0.21
SDC2-201ENST00000302190 MEGF6O75095 1541 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 ZNF500O60304 480 aaPredicted RBP16.34■□□□□ 0.21
SDC2-201ENST00000302190 TNNI3KQ59H18 835 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 CCDC34Q96HJ3 373 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 PRIMPOLQ96LW4 560 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 FPGT-TNNI3KV9GXZ4 949 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 RAD21O60216 631 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 URI1O94763 535 aaPredicted RBP16.34■□□□□ 0.21
SDC2-201ENST00000302190 TDO2P48775 406 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 HMG20BQ9P0W2 317 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 HSPA1LP34931 641 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 IFIT5Q13325 482 aaKnown RBP16.34■□□□□ 0.21
SDC2-201ENST00000302190 GCKRQ14397 625 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 AIDAQ96BJ3 306 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 FAM89AQ96GI7 184 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 CWC25Q9NXE8 425 aaPredicted RBP16.34■□□□□ 0.21
SDC2-201ENST00000302190 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
SDC2-201ENST00000302190 RGS12O14924 1447 aa16.33■□□□□ 0.21
SDC2-201ENST00000302190 PTPN21Q16825 1174 aa16.33■□□□□ 0.21
SDC2-201ENST00000302190 CEP135Q66GS9 1140 aa16.33■□□□□ 0.21
SDC2-201ENST00000302190 ACSBG1Q96GR2 724 aa16.33■□□□□ 0.21
SDC2-201ENST00000302190 LTBP4Q8N2S1 1624 aa16.33■□□□□ 0.21
SDC2-201ENST00000302190 ATP10DQ9P241 1426 aa16.33■□□□□ 0.2
SDC2-201ENST00000302190 STX1AQ16623 288 aa16.33■□□□□ 0.2
SDC2-201ENST00000302190 PCMTD1Q96MG8 357 aaPredicted RBP16.33■□□□□ 0.2
SDC2-201ENST00000302190 CTNNA3Q9UI47 895 aa16.33■□□□□ 0.2
SDC2-201ENST00000302190 SASH1O94885 1247 aa16.33■□□□□ 0.2
SDC2-201ENST00000302190 CCDC69A6NI79 296 aa16.32■□□□□ 0.2
SDC2-201ENST00000302190 MPHOSPH8Q99549 860 aa16.32■□□□□ 0.2
SDC2-201ENST00000302190 ZSWIM6Q9HCJ5 1215 aa16.32■□□□□ 0.2
SDC2-201ENST00000302190 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.32■□□□□ 0.2
SDC2-201ENST00000302190 CERKQ8TCT0 537 aa16.32■□□□□ 0.2
SDC2-201ENST00000302190 TAF6LQ9Y6J9 622 aa16.32■□□□□ 0.2
SDC2-201ENST00000302190 WDR17Q8IZU2 1322 aa16.32■□□□□ 0.2
SDC2-201ENST00000302190 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
SDC2-201ENST00000302190 KIF18AQ8NI77 898 aa16.31■□□□□ 0.2
SDC2-201ENST00000302190 DHX32Q7L7V1 743 aaKnown RBP16.31■□□□□ 0.2
SDC2-201ENST00000302190 DBNLQ9UJU6 430 aaKnown RBP16.31■□□□□ 0.2
SDC2-201ENST00000302190 SPECC1Q5M775 1068 aa16.31■□□□□ 0.2
SDC2-201ENST00000302190 SLIT3O75094 1523 aa16.3■□□□□ 0.2
SDC2-201ENST00000302190 PHKG2P15735 406 aa16.3■□□□□ 0.2
SDC2-201ENST00000302190 ZCRB1Q8TBF4 217 aaKnown RBP16.3■□□□□ 0.2
SDC2-201ENST00000302190 LRP2BPQ9P2M1 347 aa16.3■□□□□ 0.2
SDC2-201ENST00000302190 TRMT112Q9UI30 125 aaKnown RBP16.3■□□□□ 0.2
SDC2-201ENST00000302190 NEURL1BA8MQ27 555 aa16.3■□□□□ 0.2
SDC2-201ENST00000302190 POLR3GO15318 223 aaPredicted RBP16.3■□□□□ 0.2
SDC2-201ENST00000302190 PRC1O43663 620 aa16.3■□□□□ 0.2
SDC2-201ENST00000302190 EPHA10Q5JZY3 1008 aa16.3■□□□□ 0.2
SDC2-201ENST00000302190 MYL10Q9BUA6 226 aa16.3■□□□□ 0.2
SDC2-201ENST00000302190 BCL2L12Q9HB09 334 aa16.3■□□□□ 0.2
SDC2-201ENST00000302190 HMGB1P09429 215 aaKnown RBP16.3■□□□□ 0.2
SDC2-201ENST00000302190 KCNQ4P56696 695 aa16.3■□□□□ 0.2
SDC2-201ENST00000302190 FAM98CQ17RN3 349 aaKnown RBP16.3■□□□□ 0.2
SDC2-201ENST00000302190 ZSCAN16Q9H4T2 348 aaPredicted RBP16.3■□□□□ 0.2
SDC2-201ENST00000302190 IFNKQ9P0W0 207 aa16.3■□□□□ 0.2
SDC2-201ENST00000302190 A0A1B0GUL7 405 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms