RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 MYL10Q9BUA6 226 aa18.41■□□□□ 0.54
CHAF1A-201ENST00000301280 CPDO75976 1380 aa18.41■□□□□ 0.54
CHAF1A-201ENST00000301280 GTF2E1P29083 439 aaPredicted RBP18.41■□□□□ 0.54
CHAF1A-201ENST00000301280 UBE2HP62256 183 aa18.4■□□□□ 0.54
CHAF1A-201ENST00000301280 KIAA2012Q0VF49 1180 aa18.4■□□□□ 0.54
CHAF1A-201ENST00000301280 TM6SF1Q9BZW5 370 aa18.4■□□□□ 0.54
CHAF1A-201ENST00000301280 TOB2Q14106 344 aaPredicted RBP18.39■□□□□ 0.54
CHAF1A-201ENST00000301280 ZSCAN31Q96LW9 406 aaPredicted RBP18.39■□□□□ 0.54
CHAF1A-201ENST00000301280 NUP62CLQ9H1M0 184 aa18.39■□□□□ 0.53
CHAF1A-201ENST00000301280 ABCF2Q9UG63 623 aa18.39■□□□□ 0.53
CHAF1A-201ENST00000301280 NFXL1Q6ZNB6 911 aa18.39■□□□□ 0.53
CHAF1A-201ENST00000301280 STOX1Q6ZVD7 989 aa18.39■□□□□ 0.53
CHAF1A-201ENST00000301280 RALYLQ86SE5 291 aaKnown RBP18.39■□□□□ 0.53
CHAF1A-201ENST00000301280 XAGE2Q96GT9 111 aa18.39■□□□□ 0.53
CHAF1A-201ENST00000301280 ZKSCAN3Q9BRR0 538 aa18.39■□□□□ 0.53
CHAF1A-201ENST00000301280 TRIM5Q9C035 493 aa18.39■□□□□ 0.53
CHAF1A-201ENST00000301280 RFX7Q2KHR2 1363 aa18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 HSP90AA4PQ58FG1 418 aa18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 ZNF592Q92610 1267 aa18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 PDCL3Q9H2J4 239 aa18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 EYA2O00167 538 aa18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 HS1BP3Q53T59 392 aa18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 PIGBQ92521 554 aa18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 GREM2Q9H772 168 aa18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 SH2B1Q9NRF2 756 aaPredicted RBP18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 TNS3Q68CZ2 1445 aa18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 ZNF500O60304 480 aaPredicted RBP18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 DNAJC25Q9H1X3 360 aa18.38■□□□□ 0.53
CHAF1A-201ENST00000301280 ALDH8A1Q9H2A2 487 aaPredicted RBP18.37■□□□□ 0.53
CHAF1A-201ENST00000301280 COPRSQ9NQ92 184 aa18.37■□□□□ 0.53
CHAF1A-201ENST00000301280 ZBTB1Q9Y2K1 713 aa18.37■□□□□ 0.53
CHAF1A-201ENST00000301280 ATP5JP18859 108 aa18.37■□□□□ 0.53
CHAF1A-201ENST00000301280 SLC9C2Q5TAH2 1124 aa18.37■□□□□ 0.53
CHAF1A-201ENST00000301280 MICU3Q86XE3 530 aa18.37■□□□□ 0.53
CHAF1A-201ENST00000301280 OSBP2Q969R2 916 aa18.37■□□□□ 0.53
CHAF1A-201ENST00000301280 KCPQ6ZWJ8 1503 aa18.37■□□□□ 0.53
CHAF1A-201ENST00000301280 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
CHAF1A-201ENST00000301280 M0R2C6 588 aa18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 ZRSR1Q15695 479 aaKnown RBP18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 MIGA1Q8NAN2 632 aa18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 MED23Q9ULK4 1368 aa18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 SPATA31A3Q5VYP0 1347 aa18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 NR1I2O75469 434 aa18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 SCRN1Q12765 414 aa18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 KBTBD3Q8NAB2 608 aa18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 PTPDC1A2A3K4 754 aa18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 ITGA6P23229 1130 aa18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 SDF4Q9BRK5 362 aa18.36■□□□□ 0.53
CHAF1A-201ENST00000301280 RFX5P48382 616 aaPredicted RBP18.35■□□□□ 0.53
CHAF1A-201ENST00000301280 FOXO4P98177 505 aa18.35■□□□□ 0.53
CHAF1A-201ENST00000301280 PTPN21Q16825 1174 aa18.35■□□□□ 0.53
CHAF1A-201ENST00000301280 ANO6Q4KMQ2 910 aa18.35■□□□□ 0.53
CHAF1A-201ENST00000301280 HSPD1P10809 573 aaKnown RBP18.35■□□□□ 0.53
CHAF1A-201ENST00000301280 SASS6Q6UVJ0 657 aa18.35■□□□□ 0.53
CHAF1A-201ENST00000301280 GOLGA8BA8MQT2 603 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 ATG9AQ7Z3C6 839 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 FILIP1Q7Z7B0 1213 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 AIFM3Q96NN9 605 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 PUS7LQ9H0K6 701 aaKnown RBP18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 ZKSCAN5Q9Y2L8 839 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 KLF18A0A0U1RQI7 1052 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 STARD3NLO95772 234 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 PDCP20941 246 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 ATP2B3Q16720 1220 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 MARCKSP29966 332 aaPredicted RBP18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 MAP3K11Q16584 847 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 CCDC39Q9UFE4 941 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 PCDH11XQ9BZA7 1347 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 PCDH11YQ9BZA8 1340 aa18.34■□□□□ 0.53
CHAF1A-201ENST00000301280 IL15P40933 162 aaPredicted RBP18.33■□□□□ 0.53
CHAF1A-201ENST00000301280 E7EWF7 191 aa18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 IRS4O14654 1257 aaPredicted RBP18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 ANKRD1Q15327 319 aa18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 RABL6Q3YEC7 729 aaPredicted RBP18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 UQCRHLA0A096LP55 91 aa18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 BECN2A8MW95 431 aa18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 UQCRHP07919 91 aa18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 CCDC192P0DO97 292 aa18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 TSGA10IPQ3SY00 556 aa18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 MPHOSPH8Q99549 860 aa18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 SEC31BQ9NQW1 1179 aa18.33■□□□□ 0.52
CHAF1A-201ENST00000301280 hCG_1642624A0A1W2PR95 340 aa18.32■□□□□ 0.52
CHAF1A-201ENST00000301280 HAUS7Q99871 368 aa18.32■□□□□ 0.52
CHAF1A-201ENST00000301280 ZNF609O15014 1411 aa18.32■□□□□ 0.52
CHAF1A-201ENST00000301280 CSPP1Q1MSJ5 1256 aa18.32■□□□□ 0.52
CHAF1A-201ENST00000301280 NUP133Q8WUM0 1156 aa18.32■□□□□ 0.52
CHAF1A-201ENST00000301280 PHKBQ93100 1093 aa18.32■□□□□ 0.52
CHAF1A-201ENST00000301280 MAST3O60307 1309 aa18.32■□□□□ 0.52
CHAF1A-201ENST00000301280 A0A1B0GVL5 298 aa18.31■□□□□ 0.52
CHAF1A-201ENST00000301280 WTIPA6NIX2 430 aaPredicted RBP18.31■□□□□ 0.52
CHAF1A-201ENST00000301280 MINDY4BA8MYZ0 360 aa18.31■□□□□ 0.52
CHAF1A-201ENST00000301280 TRDNQ13061 729 aa18.31■□□□□ 0.52
CHAF1A-201ENST00000301280 TICAM2Q86XR7 235 aa18.31■□□□□ 0.52
CHAF1A-201ENST00000301280 CREBRFQ8IUR6 639 aa18.31■□□□□ 0.52
CHAF1A-201ENST00000301280 EXOC5O00471 708 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms