RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 KIRREL3Q8IZU9 778 aa16.69■□□□□ 0.26
CDT1-201ENST00000301019 ANKRD20A12PQ8NF67 263 aa16.69■□□□□ 0.26
CDT1-201ENST00000301019 EDC3Q96F86 508 aaKnown RBP16.69■□□□□ 0.26
CDT1-201ENST00000301019 SLC24A3Q9HC58 644 aa16.69■□□□□ 0.26
CDT1-201ENST00000301019 SCP2P22307 547 aa16.69■□□□□ 0.26
CDT1-201ENST00000301019 LRRFIP1Q32MZ4 808 aaKnown RBP16.69■□□□□ 0.26
CDT1-201ENST00000301019 CTR9Q6PD62 1173 aa16.69■□□□□ 0.26
CDT1-201ENST00000301019 USP28Q96RU2 1077 aa16.69■□□□□ 0.26
CDT1-201ENST00000301019 CDK19Q9BWU1 502 aa16.69■□□□□ 0.26
CDT1-201ENST00000301019 ANO10Q9NW15 660 aa16.69■□□□□ 0.26
CDT1-201ENST00000301019 ROBO2Q9HCK4 1378 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 KIF2AO00139 706 aaPredicted RBP16.68■□□□□ 0.26
CDT1-201ENST00000301019 EIF2S2P20042 333 aaKnown RBP16.68■□□□□ 0.26
CDT1-201ENST00000301019 TRIM65Q6PJ69 517 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 CHST3Q7LGC8 479 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 EXOC4Q96A65 974 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 JPH2Q9BR39 696 aaPredicted RBP16.68■□□□□ 0.26
CDT1-201ENST00000301019 EFCAB8A8MWE9 144 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 ZMYND10O75800 440 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 UBTFL1P0CB47 393 aaPredicted RBP16.68■□□□□ 0.26
CDT1-201ENST00000301019 TDO2P48775 406 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 SF3A1Q15459 793 aaKnown RBP16.68■□□□□ 0.26
CDT1-201ENST00000301019 BLOC1S2Q6QNY1 142 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 CREBRFQ8IUR6 639 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 PA2G4Q9UQ80 394 aaKnown RBP16.68■□□□□ 0.26
CDT1-201ENST00000301019 PTPRUQ92729 1446 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 GSDMDP57764 484 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 CCDC158Q5M9N0 1113 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 CREB3L3Q68CJ9 461 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 RHPN1Q8TCX5 695 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 CLIC6Q96NY7 704 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 FAM204AQ9H8W3 233 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 NCOA5Q9HCD5 579 aaKnown RBP16.68■□□□□ 0.26
CDT1-201ENST00000301019 CPS1P31327 1500 aa16.68■□□□□ 0.26
CDT1-201ENST00000301019 TTC21AQ8NDW8 1320 aa16.67■□□□□ 0.26
CDT1-201ENST00000301019 HSP90B2PQ58FF3 399 aa16.67■□□□□ 0.26
CDT1-201ENST00000301019 VPS53Q5VIR6 699 aa16.67■□□□□ 0.26
CDT1-201ENST00000301019 LRRC31Q6UY01 552 aa16.67■□□□□ 0.26
CDT1-201ENST00000301019 ABCB6Q9NP58 842 aa16.67■□□□□ 0.26
CDT1-201ENST00000301019 APOBRQ0VD83 1088 aa16.67■□□□□ 0.26
CDT1-201ENST00000301019 MTF1Q14872 753 aa16.67■□□□□ 0.26
CDT1-201ENST00000301019 PRPF38AQ8NAV1 312 aaKnown RBP16.67■□□□□ 0.26
CDT1-201ENST00000301019 KAT2BQ92831 832 aa16.67■□□□□ 0.26
CDT1-201ENST00000301019 STK31Q9BXU1 1019 aa16.67■□□□□ 0.26
CDT1-201ENST00000301019 AMOTL2Q9Y2J4 779 aa16.67■□□□□ 0.26
CDT1-201ENST00000301019 SOS1Q07889 1333 aaPredicted RBP16.67■□□□□ 0.26
CDT1-201ENST00000301019 SALL3Q9BXA9 1300 aa16.67■□□□□ 0.26
CDT1-201ENST00000301019 NBPF7P0C2Y1 421 aaPredicted RBP16.66■□□□□ 0.26
CDT1-201ENST00000301019 CDC25BP30305 580 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 TOGARAM2Q6ZUX3 1019 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 PI4K2BQ8TCG2 481 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 PPM1EQ8WY54 764 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 PNKPQ96T60 521 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 CENPHQ9H3R5 247 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 WDHD1O75717 1129 aaPredicted RBP16.66■□□□□ 0.26
CDT1-201ENST00000301019 LONRF3Q496Y0 759 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 GJB4Q9NTQ9 266 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 ELP1O95163 1332 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 PDCP20941 246 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 CCT5P48643 541 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 MMP14P50281 582 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 JAKMIP3Q5VZ66 844 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
CDT1-201ENST00000301019 SAMM50Q9Y512 469 aa16.66■□□□□ 0.26
CDT1-201ENST00000301019 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
CDT1-201ENST00000301019 ATP8B2P98198 1209 aa16.65■□□□□ 0.26
CDT1-201ENST00000301019 CCDC8Q9H0W5 538 aaPredicted RBP16.65■□□□□ 0.26
CDT1-201ENST00000301019 ADGRB2O60241 1585 aa16.65■□□□□ 0.26
CDT1-201ENST00000301019 DIP2AQ14689 1571 aa16.65■□□□□ 0.26
CDT1-201ENST00000301019 UBASH3AP57075 661 aa16.65■□□□□ 0.26
CDT1-201ENST00000301019 MTX1Q13505 466 aa16.65■□□□□ 0.26
CDT1-201ENST00000301019 SARM1Q6SZW1 724 aa16.65■□□□□ 0.26
CDT1-201ENST00000301019 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.65■□□□□ 0.26
CDT1-201ENST00000301019 CCDC91Q7Z6B0 441 aa16.65■□□□□ 0.26
CDT1-201ENST00000301019 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
CDT1-201ENST00000301019 A1BGP04217 495 aa16.64■□□□□ 0.26
CDT1-201ENST00000301019 ZSCAN31Q96LW9 406 aaPredicted RBP16.64■□□□□ 0.26
CDT1-201ENST00000301019 IVLP07476 585 aa16.64■□□□□ 0.25
CDT1-201ENST00000301019 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.25
CDT1-201ENST00000301019 FANCCQ00597 558 aa16.64■□□□□ 0.25
CDT1-201ENST00000301019 ZSWIM6Q9HCJ5 1215 aa16.64■□□□□ 0.25
CDT1-201ENST00000301019 VWA3AA6NCI4 1184 aa16.64■□□□□ 0.25
CDT1-201ENST00000301019 WASLO00401 505 aaPredicted RBP16.64■□□□□ 0.25
CDT1-201ENST00000301019 NDUFA8P51970 172 aa16.64■□□□□ 0.25
CDT1-201ENST00000301019 FLIIQ13045 1269 aa16.64■□□□□ 0.25
CDT1-201ENST00000301019 MCTP2Q6DN12 878 aa16.64■□□□□ 0.25
CDT1-201ENST00000301019 PPP2R2CQ9Y2T4 447 aa16.64■□□□□ 0.25
CDT1-201ENST00000301019 AKAP17AQ02040 695 aaKnown RBP16.63■□□□□ 0.25
CDT1-201ENST00000301019 HSP90AB3PQ58FF7 597 aa16.63■□□□□ 0.25
CDT1-201ENST00000301019 GSPT2Q8IYD1 628 aaKnown RBP16.63■□□□□ 0.25
CDT1-201ENST00000301019 PHAXQ9H814 394 aaKnown RBP16.63■□□□□ 0.25
CDT1-201ENST00000301019 MRPS25P82663 173 aaKnown RBP16.63■□□□□ 0.25
CDT1-201ENST00000301019 NMIQ13287 307 aaPredicted RBP16.63■□□□□ 0.25
CDT1-201ENST00000301019 GPR161Q8N6U8 529 aaKnown RBP16.63■□□□□ 0.25
CDT1-201ENST00000301019 NAT10Q9H0A0 1025 aaKnown RBP16.63■□□□□ 0.25
CDT1-201ENST00000301019 BRMS1Q9HCU9 246 aa16.63■□□□□ 0.25
CDT1-201ENST00000301019 FANCLQ9NW38 375 aa16.63■□□□□ 0.25
CDT1-201ENST00000301019 IL13P35225 146 aa16.62■□□□□ 0.25
CDT1-201ENST00000301019 H0YHG0 523 aa16.62■□□□□ 0.25
CDT1-201ENST00000301019 ERLIN2O94905 339 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms