RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PI16Q6UXB8 463 aa15.2■□□□□ 0.02
HIF3A-204ENST00000300862 DSCC1Q9BVC3 393 aa15.2■□□□□ 0.02
HIF3A-204ENST00000300862 PFKFB2O60825 505 aa15.2■□□□□ 0.02
HIF3A-204ENST00000300862 GPR108Q9NPR9 543 aa15.2■□□□□ 0.02
HIF3A-204ENST00000300862 ASAP1Q9ULH1 1129 aa15.2■□□□□ 0.02
HIF3A-204ENST00000300862 EVA1CP58658 441 aa15.19■□□□□ 0.02
HIF3A-204ENST00000300862 EXOSC10Q01780 885 aaKnown RBP15.19■□□□□ 0.02
HIF3A-204ENST00000300862 WASHC4Q2M389 1173 aa15.19■□□□□ 0.02
HIF3A-204ENST00000300862 FAM200AQ8TCP9 573 aa15.19■□□□□ 0.02
HIF3A-204ENST00000300862 NOLC1Q14978 699 aaKnown RBP eCLIP15.19■□□□□ 0.02
HIF3A-204ENST00000300862 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
HIF3A-204ENST00000300862 SMARCC2Q8TAQ2 1214 aa15.19■□□□□ 0.02
HIF3A-204ENST00000300862 XAGE2Q96GT9 111 aa15.19■□□□□ 0.02
HIF3A-204ENST00000300862 ABCC6O95255 1503 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 KCPQ6ZWJ8 1503 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 HMGB1P09429 215 aaKnown RBP15.18■□□□□ 0.02
HIF3A-204ENST00000300862 RAB11FIP4Q86YS3 637 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 PIBF1Q8WXW3 757 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 CBX8Q9HC52 389 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 LAMB4A4D0S4 1761 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 GPTP24298 496 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 TCIRG1Q13488 830 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 TAF7LQ5H9L4 462 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 TTC39AQ5SRH9 613 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 SMAP1Q8IYB5 467 aaPredicted RBP15.18■□□□□ 0.02
HIF3A-204ENST00000300862 MYRIPQ8NFW9 859 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 ISCA1Q9BUE6 129 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 KCNF1Q9H3M0 494 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 CLSTN2Q9H4D0 955 aa15.18■□□□□ 0.02
HIF3A-204ENST00000300862 ADD1P35611 737 aaKnown RBP15.17■□□□□ 0.02
HIF3A-204ENST00000300862 NKX1-1Q15270 411 aaPredicted RBP15.17■□□□□ 0.02
HIF3A-204ENST00000300862 DDX19AQ9NUU7 478 aaKnown RBP15.17■□□□□ 0.02
HIF3A-204ENST00000300862 TMOD3Q9NYL9 352 aa15.17■□□□□ 0.02
HIF3A-204ENST00000300862 COL5A2P05997 1499 aaPredicted RBP15.17■□□□□ 0.02
HIF3A-204ENST00000300862 KAT6BQ8WYB5 2073 aa15.17■□□□□ 0.02
HIF3A-204ENST00000300862 A0A087WWV3 80 aa15.17■□□□□ 0.02
HIF3A-204ENST00000300862 CIAO1O76071 339 aa15.17■□□□□ 0.02
HIF3A-204ENST00000300862 PDIA3P30101 505 aaKnown RBP15.17■□□□□ 0.02
HIF3A-204ENST00000300862 ZAP70P43403 619 aa15.17■□□□□ 0.02
HIF3A-204ENST00000300862 CARD10Q9BWT7 1032 aa15.17■□□□□ 0.02
HIF3A-204ENST00000300862 DNAJC25Q9H1X3 360 aa15.17■□□□□ 0.02
HIF3A-204ENST00000300862 PYCARDQ9ULZ3 195 aa15.17■□□□□ 0.02
HIF3A-204ENST00000300862 TJP1Q07157 1748 aa15.16■□□□□ 0.02
HIF3A-204ENST00000300862 FOXP2O15409 715 aa15.16■□□□□ 0.02
HIF3A-204ENST00000300862 CCDC158Q5M9N0 1113 aa15.16■□□□□ 0.02
HIF3A-204ENST00000300862 OTUD7BQ6GQQ9 843 aa15.16■□□□□ 0.02
HIF3A-204ENST00000300862 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
HIF3A-204ENST00000300862 TSC1Q92574 1164 aa15.16■□□□□ 0.02
HIF3A-204ENST00000300862 ZSCAN16Q9H4T2 348 aaPredicted RBP15.16■□□□□ 0.02
HIF3A-204ENST00000300862 USP28Q96RU2 1077 aa15.16■□□□□ 0.02
HIF3A-204ENST00000300862 LLPHQ9BRT6 129 aaKnown RBP15.16■□□□□ 0.02
HIF3A-204ENST00000300862 CFAP45Q9UL16 551 aa15.16■□□□□ 0.02
HIF3A-204ENST00000300862 LAMA4Q16363 1823 aa15.15■□□□□ 0.02
HIF3A-204ENST00000300862 ZNF710Q8N1W2 664 aa15.15■□□□□ 0.02
HIF3A-204ENST00000300862 PIGBQ92521 554 aa15.15■□□□□ 0.02
HIF3A-204ENST00000300862 BCL11BQ9C0K0 894 aaPredicted RBP15.15■□□□□ 0.02
HIF3A-204ENST00000300862 PUS7LQ9H0K6 701 aaKnown RBP15.15■□□□□ 0.02
HIF3A-204ENST00000300862 PRDM10Q9NQV6 1147 aa15.15■□□□□ 0.02
HIF3A-204ENST00000300862 SLAIN2Q9P270 581 aa15.15■□□□□ 0.02
HIF3A-204ENST00000300862 TAOK2Q9UL54 1235 aa15.15■□□□□ 0.02
HIF3A-204ENST00000300862 NUP188Q5SRE5 1749 aa15.15■□□□□ 0.02
HIF3A-204ENST00000300862 HLFQ16534 295 aa15.15■□□□□ 0.02
HIF3A-204ENST00000300862 CCDC94Q9BW85 323 aaPredicted RBP15.15■□□□□ 0.02
HIF3A-204ENST00000300862 AGXT2Q9BYV1 514 aa15.15■□□□□ 0.02
HIF3A-204ENST00000300862 PLEKHG2Q9H7P9 1386 aa15.14■□□□□ 0.01
HIF3A-204ENST00000300862 FGAP02671 866 aa15.14■□□□□ 0.01
HIF3A-204ENST00000300862 PTGS1P23219 599 aa15.14■□□□□ 0.01
HIF3A-204ENST00000300862 IFIT5Q13325 482 aaKnown RBP15.14■□□□□ 0.01
HIF3A-204ENST00000300862 ERCC4Q92889 916 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-204ENST00000300862 GOLPH3LQ9H4A5 285 aa15.14■□□□□ 0.01
HIF3A-204ENST00000300862 ATG3Q9NT62 314 aa15.14■□□□□ 0.01
HIF3A-204ENST00000300862 ZNF165P49910 485 aa15.14■□□□□ 0.01
HIF3A-204ENST00000300862 CCAR1Q8IX12 1150 aaKnown RBP15.14■□□□□ 0.01
HIF3A-204ENST00000300862 GJB4Q9NTQ9 266 aa15.14■□□□□ 0.01
HIF3A-204ENST00000300862 NRBP1Q9UHY1 535 aa15.14■□□□□ 0.01
HIF3A-204ENST00000300862 FDPSP14324 419 aaKnown RBP15.13■□□□□ 0.01
HIF3A-204ENST00000300862 HMGN5P82970 282 aaKnown RBP15.13■□□□□ 0.01
HIF3A-204ENST00000300862 NAA16Q6N069 864 aaPredicted RBP15.13■□□□□ 0.01
HIF3A-204ENST00000300862 KIF6Q6ZMV9 814 aa15.13■□□□□ 0.01
HIF3A-204ENST00000300862 RBM43Q6ZSC3 357 aaKnown RBP15.13■□□□□ 0.01
HIF3A-204ENST00000300862 ILDR1Q86SU0 546 aaPredicted RBP15.13■□□□□ 0.01
HIF3A-204ENST00000300862 PARP4Q9UKK3 1724 aaKnown RBP15.13■□□□□ 0.01
HIF3A-204ENST00000300862 DRC7Q8IY82 874 aa15.13■□□□□ 0.01
HIF3A-204ENST00000300862 FBXW7Q969H0 707 aa15.13■□□□□ 0.01
HIF3A-204ENST00000300862 TRIM5Q9C035 493 aa15.13■□□□□ 0.01
HIF3A-204ENST00000300862 GREM2Q9H772 168 aa15.13■□□□□ 0.01
HIF3A-204ENST00000300862 DENND2AQ9ULE3 1009 aa15.13■□□□□ 0.01
HIF3A-204ENST00000300862 SOS2Q07890 1332 aaPredicted RBP15.12■□□□□ 0.01
HIF3A-204ENST00000300862 METTL24Q5JXM2 366 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 AKAP2Q9Y2D5 859 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 UBR2Q8IWV8 1755 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 SALL1Q9NSC2 1324 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 FAM177BA6PVY3 158 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 PCCAP05165 728 aaPredicted RBP15.12■□□□□ 0.01
HIF3A-204ENST00000300862 ME1P48163 572 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 LRMPQ12912 555 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 LDHAL6AQ6ZMR3 332 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 ZBTB38Q8NAP3 1195 aaPredicted RBP15.12■□□□□ 0.01
HIF3A-204ENST00000300862 KIAA1524Q8TCG1 905 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 ZNF274Q96GC6 653 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms