RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 FOXO4P98177 505 aa13.16□□□□□ -0.3
VWA3A-201ENST00000299840 RASSF7Q02833 373 aa13.16□□□□□ -0.3
VWA3A-201ENST00000299840 EP400NLQ6ZTU2 488 aa13.16□□□□□ -0.3
VWA3A-201ENST00000299840 FSD2A1L4K1 749 aa13.15□□□□□ -0.3
VWA3A-201ENST00000299840 RPS8P62241 208 aaKnown RBP13.15□□□□□ -0.3
VWA3A-201ENST00000299840 C9orf131Q5VYM1 1079 aa13.15□□□□□ -0.3
VWA3A-201ENST00000299840 INTS3Q68E01 1043 aaKnown RBP13.15□□□□□ -0.3
VWA3A-201ENST00000299840 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
VWA3A-201ENST00000299840 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.3
VWA3A-201ENST00000299840 DYNC1I1O14576 645 aa13.15□□□□□ -0.3
VWA3A-201ENST00000299840 MPNDQ8N594 471 aa13.15□□□□□ -0.3
VWA3A-201ENST00000299840 RTFDC1Q9BY42 306 aaPredicted RBP13.15□□□□□ -0.3
VWA3A-201ENST00000299840 VPS33BQ9H267 617 aa13.15□□□□□ -0.3
VWA3A-201ENST00000299840 A0A1B0GUL6 1792 aa13.14□□□□□ -0.31
VWA3A-201ENST00000299840 LOC102724159A0A0B4J2E5 919 aa13.14□□□□□ -0.31
VWA3A-201ENST00000299840 PWP2Q15269 919 aaKnown RBP13.14□□□□□ -0.31
VWA3A-201ENST00000299840 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
VWA3A-201ENST00000299840 OLFM4Q6UX06 510 aa13.14□□□□□ -0.31
VWA3A-201ENST00000299840 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
VWA3A-201ENST00000299840 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
VWA3A-201ENST00000299840 SEC31BQ9NQW1 1179 aa13.14□□□□□ -0.31
VWA3A-201ENST00000299840 PLCB2Q00722 1185 aa13.14□□□□□ -0.31
VWA3A-201ENST00000299840 CDC5LQ99459 802 aaKnown RBP13.14□□□□□ -0.31
VWA3A-201ENST00000299840 TRIM27P14373 513 aa13.13□□□□□ -0.31
VWA3A-201ENST00000299840 GREM2Q9H772 168 aa13.13□□□□□ -0.31
VWA3A-201ENST00000299840 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
VWA3A-201ENST00000299840 DUOX1Q9NRD9 1551 aa13.13□□□□□ -0.31
VWA3A-201ENST00000299840 NBPF7P0C2Y1 421 aaPredicted RBP13.13□□□□□ -0.31
VWA3A-201ENST00000299840 SUPT20HQ8NEM7 779 aa13.13□□□□□ -0.31
VWA3A-201ENST00000299840 KAZALD1Q96I82 304 aa13.13□□□□□ -0.31
VWA3A-201ENST00000299840 SLC4A3P48751 1232 aa13.12□□□□□ -0.31
VWA3A-201ENST00000299840 RABL6Q3YEC7 729 aaPredicted RBP13.12□□□□□ -0.31
VWA3A-201ENST00000299840 EPHA10Q5JZY3 1008 aa13.12□□□□□ -0.31
VWA3A-201ENST00000299840 ANKRD18AQ8IVF6 992 aa13.12□□□□□ -0.31
VWA3A-201ENST00000299840 SUCLG2Q96I99 432 aa13.12□□□□□ -0.31
VWA3A-201ENST00000299840 NBPF11Q86T75 865 aa13.12□□□□□ -0.31
VWA3A-201ENST00000299840 BSDC1Q9NW68 430 aaPredicted RBP13.12□□□□□ -0.31
VWA3A-201ENST00000299840 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
VWA3A-201ENST00000299840 UQCRHLA0A096LP55 91 aa13.11□□□□□ -0.31
VWA3A-201ENST00000299840 UQCRHP07919 91 aa13.11□□□□□ -0.31
VWA3A-201ENST00000299840 ITGA6P23229 1130 aa13.11□□□□□ -0.31
VWA3A-201ENST00000299840 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
VWA3A-201ENST00000299840 GOLGB1Q14789 3259 aaKnown RBP13.11□□□□□ -0.31
VWA3A-201ENST00000299840 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
VWA3A-201ENST00000299840 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
VWA3A-201ENST00000299840 MS4A1P11836 297 aa13.1□□□□□ -0.31
VWA3A-201ENST00000299840 FAM161AQ3B820 660 aa13.1□□□□□ -0.31
VWA3A-201ENST00000299840 LMBR1LQ6UX01 489 aa13.1□□□□□ -0.31
VWA3A-201ENST00000299840 DPP8Q6V1X1 898 aaPredicted RBP13.1□□□□□ -0.31
VWA3A-201ENST00000299840 SLC51AQ86UW1 340 aa13.1□□□□□ -0.31
VWA3A-201ENST00000299840 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
VWA3A-201ENST00000299840 TRIM34Q9BYJ4 488 aa13.1□□□□□ -0.31
VWA3A-201ENST00000299840 RCAN3Q9UKA8 241 aa13.1□□□□□ -0.31
VWA3A-201ENST00000299840 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
VWA3A-201ENST00000299840 ZNF784Q8NCA9 323 aaPredicted RBP13.1□□□□□ -0.31
VWA3A-201ENST00000299840 ZNF277Q9NRM2 450 aaPredicted RBP13.1□□□□□ -0.31
VWA3A-201ENST00000299840 TTC36A6NLP5 189 aa13.09□□□□□ -0.31
VWA3A-201ENST00000299840 IGHMBP2P38935 993 aaKnown RBP13.09□□□□□ -0.31
VWA3A-201ENST00000299840 MRE11P49959 708 aa13.09□□□□□ -0.31
VWA3A-201ENST00000299840 IFIT5Q13325 482 aaKnown RBP13.09□□□□□ -0.31
VWA3A-201ENST00000299840 TNNQ9UQP3 1299 aa13.09□□□□□ -0.31
VWA3A-201ENST00000299840 WDR90Q96KV7 1748 aa13.09□□□□□ -0.31
VWA3A-201ENST00000299840 MAFGO15525 162 aa13.09□□□□□ -0.31
VWA3A-201ENST00000299840 ZNF500O60304 480 aaPredicted RBP13.09□□□□□ -0.31
VWA3A-201ENST00000299840 GPSM2P81274 684 aa13.09□□□□□ -0.31
VWA3A-201ENST00000299840 CBX1P83916 185 aa13.09□□□□□ -0.31
VWA3A-201ENST00000299840 BICC1Q9H694 974 aaKnown RBP13.09□□□□□ -0.31
VWA3A-201ENST00000299840 COL4A5P29400 1685 aa13.09□□□□□ -0.31
VWA3A-201ENST00000299840 PSME4Q14997 1843 aa13.08□□□□□ -0.31
VWA3A-201ENST00000299840 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.08□□□□□ -0.32
VWA3A-201ENST00000299840 UBTFL1P0CB47 393 aaPredicted RBP13.08□□□□□ -0.32
VWA3A-201ENST00000299840 DZIP1LQ8IYY4 767 aaKnown RBP13.08□□□□□ -0.32
VWA3A-201ENST00000299840 TSPYL1Q9H0U9 437 aa13.08□□□□□ -0.32
VWA3A-201ENST00000299840 GOLIM4O00461 696 aa13.08□□□□□ -0.32
VWA3A-201ENST00000299840 GNAI3P08754 354 aa13.08□□□□□ -0.32
VWA3A-201ENST00000299840 SATB1Q01826 763 aa13.08□□□□□ -0.32
VWA3A-201ENST00000299840 CCDC57Q2TAC2 916 aa13.08□□□□□ -0.32
VWA3A-201ENST00000299840 MINPP1Q9UNW1 487 aa13.08□□□□□ -0.32
VWA3A-201ENST00000299840 R3HCC1Q9Y3T6 440 aaKnown RBP13.08□□□□□ -0.32
VWA3A-201ENST00000299840 XDHP47989 1333 aa13.08□□□□□ -0.32
VWA3A-201ENST00000299840 SCN4AP35499 1836 aa13.07□□□□□ -0.32
VWA3A-201ENST00000299840 FZD9O00144 591 aa13.07□□□□□ -0.32
VWA3A-201ENST00000299840 KIAA2012Q0VF49 1180 aa13.07□□□□□ -0.32
VWA3A-201ENST00000299840 TMEM57Q8N5G2 664 aa13.07□□□□□ -0.32
VWA3A-201ENST00000299840 EFCC1Q9HA90 598 aa13.07□□□□□ -0.32
VWA3A-201ENST00000299840 NSFL1CQ9UNZ2 370 aaKnown RBP13.07□□□□□ -0.32
VWA3A-201ENST00000299840 ATP2B4P23634 1241 aa13.07□□□□□ -0.32
VWA3A-201ENST00000299840 TBC1D16Q8TBP0 767 aa13.07□□□□□ -0.32
VWA3A-201ENST00000299840 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
VWA3A-201ENST00000299840 POLLQ9UGP5 575 aa13.07□□□□□ -0.32
VWA3A-201ENST00000299840 UTRNP46939 3433 aa13.07□□□□□ -0.32
VWA3A-201ENST00000299840 GLTPD2A6NH11 291 aa13.06□□□□□ -0.32
VWA3A-201ENST00000299840 CLUAP1Q96AJ1 413 aa13.06□□□□□ -0.32
VWA3A-201ENST00000299840 EYA3Q99504 573 aa13.06□□□□□ -0.32
VWA3A-201ENST00000299840 MPHOSPH8Q99549 860 aa13.06□□□□□ -0.32
VWA3A-201ENST00000299840 MEIS3Q99687 375 aa13.06□□□□□ -0.32
VWA3A-201ENST00000299840 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
VWA3A-201ENST00000299840 PPIP5K2O43314 1243 aa13.06□□□□□ -0.32
VWA3A-201ENST00000299840 MAP2K1Q02750 393 aaPredicted RBP13.06□□□□□ -0.32
VWA3A-201ENST00000299840 LARGE2Q8N3Y3 721 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms