RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 CYLC1P35663 651 aaPredicted RBP6.3□□□□□ -1.4
CPSF2-201ENST00000298875 TPD52P55327 224 aaPredicted RBP6.3□□□□□ -1.4
CPSF2-201ENST00000298875 ZC3H6P61129 1189 aaKnown RBP6.3□□□□□ -1.4
CPSF2-201ENST00000298875 LRRC45Q96CN5 670 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 ZSCAN16Q9H4T2 348 aaPredicted RBP6.3□□□□□ -1.4
CPSF2-201ENST00000298875 THEGQ9P2T0 379 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 RABGAP1Q9Y3P9 1069 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 SKILP12757 684 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 PLCH2O75038 1416 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 UBA7P41226 1012 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 OGFRQ9NZT2 677 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 EBAG9O00559 213 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 NBPF11Q86T75 865 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 DNAI1Q9UI46 699 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 NDC80O14777 642 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 PHACTR2O75167 634 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 PIP4K2BP78356 416 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 AP1ARQ63HQ0 302 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 TAF7Q15545 349 aaPredicted RBP6.3□□□□□ -1.4
CPSF2-201ENST00000298875 SLF2Q8IX21 1173 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 MAP3K2Q9Y2U5 619 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 CROCCP2Q86T23 111 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 ATP6V1AP38606 617 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 ZBTB16Q05516 673 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 CCDC114Q96M63 670 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 GUCA1BQ9UMX6 200 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 ABCC11Q96J66 1382 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 WHAMMP3Q1A5X7 153 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 MPRIPQ6WCQ1 1025 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 NCOA7Q8NI08 942 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 NUDT16Q96DE0 195 aaKnown RBP6.3□□□□□ -1.4
CPSF2-201ENST00000298875 LRRC27Q9C0I9 530 aa6.3□□□□□ -1.4
CPSF2-201ENST00000298875 PAXIP1Q6ZW49 1069 aaPredicted RBP6.29□□□□□ -1.4
CPSF2-201ENST00000298875 UBLCP1Q8WVY7 318 aaPredicted RBP6.29□□□□□ -1.4
CPSF2-201ENST00000298875 PTPRCP08575 1304 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 EEF2P13639 858 aaKnown RBP6.29□□□□□ -1.4
CPSF2-201ENST00000298875 NBPF8Q3BBV2 869 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 DPH6Q7L8W6 267 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 ERMNQ8TAM6 284 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 AKR1B10O60218 316 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 RHOXF2BP0C7M4 288 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 CFAP157Q5JU67 520 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 LMNTD2Q8IXW0 634 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 PPFIBP2Q8ND30 876 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 RHOXF2Q9BQY4 288 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 TSPY2A6NKD2 308 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 TTC22Q5TAA0 569 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 KCNG4Q8TDN1 519 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 TRIM27P14373 513 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 LRCH2Q5VUJ6 765 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 USP48Q86UV5 1035 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 CWC25Q9NXE8 425 aaPredicted RBP6.29□□□□□ -1.4
CPSF2-201ENST00000298875 SLU7O95391 586 aaKnown RBP6.29□□□□□ -1.4
CPSF2-201ENST00000298875 LACTBP83111 547 aaPredicted RBP6.29□□□□□ -1.4
CPSF2-201ENST00000298875 UBXN1Q04323 297 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 PRPHP41219 470 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 NAA25Q14CX7 972 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 ODF2LQ9ULJ1 636 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 ERCC3P19447 782 aa6.29□□□□□ -1.4
CPSF2-201ENST00000298875 ATP2A1O14983 1001 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 CEP85LQ5SZL2 805 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 CPLX4Q7Z7G2 160 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 VCXQ9H320 206 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 SPAG5Q96R06 1193 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 HLA-DOAP06340 250 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 SMC1BQ8NDV3 1235 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 KRT86O43790 486 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 PPP1R7Q15435 360 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 NECAB1Q8N987 351 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 NEK1Q96PY6 1258 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 ORC3Q9UBD5 711 aaPredicted RBP6.28□□□□□ -1.4
CPSF2-201ENST00000298875 ALDH3A1P30838 453 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 KARSQ15046 597 aaKnown RBP6.28□□□□□ -1.4
CPSF2-201ENST00000298875 CCDC25Q86WR0 208 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 GBP7Q8N8V2 638 aaPredicted RBP6.28□□□□□ -1.4
CPSF2-201ENST00000298875 VCX3BQ9H321 246 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 LZTFL1Q9NQ48 299 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 PLCD3Q8N3E9 789 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 DNAJC25Q9H1X3 360 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 STIM2Q9P246 746 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 GPTP24298 496 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 SETDB1Q15047 1291 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 UTP14AQ9BVJ6 771 aaKnown RBP6.28□□□□□ -1.4
CPSF2-201ENST00000298875 CRNKL1Q9BZJ0 848 aaKnown RBP6.28□□□□□ -1.4
CPSF2-201ENST00000298875 KCNK9Q9NPC2 374 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 TRIM35Q9UPQ4 493 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 CTTNBP2Q8WZ74 1663 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 ATP10AO60312 1499 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 IFIT1BQ5T764 474 aaKnown RBP6.28□□□□□ -1.4
CPSF2-201ENST00000298875 UTP14CQ5TAP6 766 aaKnown RBP6.28□□□□□ -1.4
CPSF2-201ENST00000298875 USP37Q86T82 979 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 RPUSD2Q8IZ73 545 aaKnown RBP6.28□□□□□ -1.4
CPSF2-201ENST00000298875 TMX3Q96JJ7 454 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 TRIM7Q9C029 511 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 HMG20BQ9P0W2 317 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 GTF3C6Q969F1 213 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 SNRKQ9NRH2 765 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 WTAPQ15007 396 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 CCDC186Q7Z3E2 898 aa6.28□□□□□ -1.4
CPSF2-201ENST00000298875 FAM76AQ8TAV0 307 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms