RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 PODXL2Q9NZ53 605 aa29.92■■■□□ 2.38
GTF2A1-201ENST00000298173 PPEF1O14829 653 aaPredicted RBP29.91■■■□□ 2.38
GTF2A1-201ENST00000298173 MCAMP43121 646 aa29.91■■■□□ 2.38
GTF2A1-201ENST00000298173 BCAMP50895 628 aa29.91■■■□□ 2.38
GTF2A1-201ENST00000298173 GPSM2P81274 684 aa29.91■■■□□ 2.38
GTF2A1-201ENST00000298173 DNAJC2Q99543 621 aaKnown RBP29.91■■■□□ 2.38
GTF2A1-201ENST00000298173 FAM84BQ96KN1 310 aaPredicted RBP29.91■■■□□ 2.38
GTF2A1-201ENST00000298173 SGIP1Q9BQI5 828 aa29.91■■■□□ 2.38
GTF2A1-201ENST00000298173 PAG1Q9NWQ8 432 aa29.91■■■□□ 2.38
GTF2A1-201ENST00000298173 ANKIB1Q9P2G1 1089 aa29.91■■■□□ 2.38
GTF2A1-201ENST00000298173 CHRNA5P30532 468 aa29.9■■■□□ 2.38
GTF2A1-201ENST00000298173 ZNF622Q969S3 477 aaKnown RBP eCLIP29.9■■■□□ 2.385e-8■■■■■ 31
GTF2A1-201ENST00000298173 LTBP1Q14766 1721 aa29.9■■■□□ 2.38
GTF2A1-201ENST00000298173 PSDA5PKW4 1024 aaPredicted RBP29.89■■■□□ 2.38
GTF2A1-201ENST00000298173 FBXO33Q7Z6M2 555 aa29.89■■■□□ 2.38
GTF2A1-201ENST00000298173 TICAM2Q86XR7 235 aa29.89■■■□□ 2.38
GTF2A1-201ENST00000298173 POLD1P28340 1107 aa29.88■■■□□ 2.37
GTF2A1-201ENST00000298173 KCNJ4P48050 445 aa29.88■■■□□ 2.37
GTF2A1-201ENST00000298173 KBTBD3Q8NAB2 608 aa29.88■■■□□ 2.37
GTF2A1-201ENST00000298173 NSFL1CQ9UNZ2 370 aaKnown RBP29.88■■■□□ 2.37
GTF2A1-201ENST00000298173 DLEC1Q9Y238 1755 aa29.88■■■□□ 2.37
GTF2A1-201ENST00000298173 GOLIM4O00461 696 aa29.88■■■□□ 2.37
GTF2A1-201ENST00000298173 ZBTB22O15209 634 aa29.88■■■□□ 2.37
GTF2A1-201ENST00000298173 KLRK1P26718 216 aa29.88■■■□□ 2.37
GTF2A1-201ENST00000298173 GYG1P46976 350 aa29.88■■■□□ 2.37
GTF2A1-201ENST00000298173 C15orf52Q6ZUT6 534 aaKnown RBP29.88■■■□□ 2.37
GTF2A1-201ENST00000298173 SNRKQ9NRH2 765 aa29.88■■■□□ 2.37
GTF2A1-201ENST00000298173 CACNA1SQ13698 1873 aa29.87■■■□□ 2.37
GTF2A1-201ENST00000298173 SLX4Q8IY92 1834 aa29.87■■■□□ 2.37
GTF2A1-201ENST00000298173 EIF5BO60841 1220 aaKnown RBP29.87■■■□□ 2.37
GTF2A1-201ENST00000298173 ATP2B4P23634 1241 aa29.87■■■□□ 2.37
GTF2A1-201ENST00000298173 ZAP70P43403 619 aa29.87■■■□□ 2.37
GTF2A1-201ENST00000298173 FKBP4Q02790 459 aaKnown RBP eCLIP29.87■■■□□ 2.37
GTF2A1-201ENST00000298173 CNKSR1Q969H4 720 aa29.87■■■□□ 2.37
GTF2A1-201ENST00000298173 ESYT1Q9BSJ8 1104 aa29.87■■■□□ 2.37
GTF2A1-201ENST00000298173 ANTXR1Q9H6X2 564 aa29.87■■■□□ 2.37
GTF2A1-201ENST00000298173 RFX7Q2KHR2 1363 aa29.86■■■□□ 2.37
GTF2A1-201ENST00000298173 MFAP1P55081 439 aaKnown RBP29.86■■■□□ 2.37
GTF2A1-201ENST00000298173 CAVIN4Q5BKX8 364 aa29.86■■■□□ 2.37
GTF2A1-201ENST00000298173 PI16Q6UXB8 463 aa29.86■■■□□ 2.37
GTF2A1-201ENST00000298173 FSD1Q9BTV5 496 aa29.86■■■□□ 2.37
GTF2A1-201ENST00000298173 HMG20BQ9P0W2 317 aa29.86■■■□□ 2.37
GTF2A1-201ENST00000298173 TXNRD3Q86VQ6 643 aa29.85■■■□□ 2.37
GTF2A1-201ENST00000298173 HIP1O00291 1037 aa29.85■■■□□ 2.37
GTF2A1-201ENST00000298173 RASGRF1Q13972 1273 aa29.85■■■□□ 2.37
GTF2A1-201ENST00000298173 SPATA5Q8NB90 893 aa29.84■■■□□ 2.37
GTF2A1-201ENST00000298173 GGA1Q9UJY5 639 aa29.84■■■□□ 2.37
GTF2A1-201ENST00000298173 CYP2E1P05181 493 aaPredicted RBP29.83■■■□□ 2.37
GTF2A1-201ENST00000298173 KCNA3P22001 575 aa29.83■■■□□ 2.37
GTF2A1-201ENST00000298173 PRPF40BQ6NWY9 871 aaKnown RBP29.83■■■□□ 2.37
GTF2A1-201ENST00000298173 TBC1D16Q8TBP0 767 aa29.83■■■□□ 2.37
GTF2A1-201ENST00000298173 C7orf43Q8WVR3 580 aa29.83■■■□□ 2.37
GTF2A1-201ENST00000298173 IL25Q9H293 177 aa29.83■■■□□ 2.37
GTF2A1-201ENST00000298173 POLLQ9UGP5 575 aa29.83■■■□□ 2.37
GTF2A1-201ENST00000298173 PTGER2P43116 358 aa29.82■■■□□ 2.36
GTF2A1-201ENST00000298173 GNL3LQ9NVN8 582 aaKnown RBP29.82■■■□□ 2.36
GTF2A1-201ENST00000298173 HIBADHP31937 336 aaKnown RBP29.82■■■□□ 2.36
GTF2A1-201ENST00000298173 UPF2Q9HAU5 1272 aaKnown RBP29.82■■■□□ 2.36
GTF2A1-201ENST00000298173 DIAPH3Q9NSV4 1193 aa29.82■■■□□ 2.36
GTF2A1-201ENST00000298173 KIAA1551Q9HCM1 1747 aa29.81■■■□□ 2.36
GTF2A1-201ENST00000298173 SGSM2O43147 1006 aa29.81■■■□□ 2.36
GTF2A1-201ENST00000298173 UFL1O94874 794 aa29.81■■■□□ 2.36
GTF2A1-201ENST00000298173 TGFB2P61812 414 aa29.81■■■□□ 2.36
GTF2A1-201ENST00000298173 CWC27Q6UX04 472 aaKnown RBP29.81■■■□□ 2.36
GTF2A1-201ENST00000298173 OLFM4Q6UX06 510 aa29.81■■■□□ 2.36
GTF2A1-201ENST00000298173 TTF1Q15361 905 aaPredicted RBP29.8■■■□□ 2.36
GTF2A1-201ENST00000298173 MYO5AQ9Y4I1 1855 aaKnown RBP29.8■■■□□ 2.36
GTF2A1-201ENST00000298173 SEMA3EO15041 775 aa29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 DPEP1P16444 411 aa29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 VPS37DQ86XT2 251 aa29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 MPNDQ8N594 471 aa29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 TBC1D32Q96NH3 1257 aa29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 DUOX1Q9NRD9 1551 aa29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 A0A0G2JLW4 131 aa29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 REC8O95072 547 aa29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 NMIQ13287 307 aaPredicted RBP29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 RUFY2Q8WXA3 655 aa29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 FAM227BQ96M60 508 aa29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 USP26Q9BXU7 913 aa29.79■■■□□ 2.36
GTF2A1-201ENST00000298173 MYH7P12883 1935 aa29.77■■■□□ 2.36
GTF2A1-201ENST00000298173 CHGBP05060 677 aa29.77■■■□□ 2.36
GTF2A1-201ENST00000298173 TMX4Q9H1E5 349 aaPredicted RBP29.77■■■□□ 2.36
GTF2A1-201ENST00000298173 PIH1D3Q9NQM4 214 aaKnown RBP29.77■■■□□ 2.36
GTF2A1-201ENST00000298173 DENND2AQ9ULE3 1009 aa29.77■■■□□ 2.36
GTF2A1-201ENST00000298173 PDS5AQ29RF7 1337 aaKnown RBP29.77■■■□□ 2.36
GTF2A1-201ENST00000298173 MED23Q9ULK4 1368 aa29.77■■■□□ 2.36
GTF2A1-201ENST00000298173 DOCK2Q92608 1830 aa29.76■■■□□ 2.36
GTF2A1-201ENST00000298173 TTLL6Q8N841 843 aa29.76■■■□□ 2.36
GTF2A1-201ENST00000298173 GPR101Q96P66 508 aaPredicted RBP29.76■■■□□ 2.36
GTF2A1-201ENST00000298173 C22orf23Q9BZE7 217 aa29.76■■■□□ 2.36
GTF2A1-201ENST00000298173 IQSEC3Q9UPP2 1182 aaPredicted RBP29.76■■■□□ 2.36
GTF2A1-201ENST00000298173 COL1A1P02452 1464 aaPredicted RBP29.76■■■□□ 2.35
GTF2A1-201ENST00000298173 SNED1Q8TER0 1413 aa29.76■■■□□ 2.35
GTF2A1-201ENST00000298173 A0A0D9SFI3 127 aa29.76■■■□□ 2.35
GTF2A1-201ENST00000298173 TDRD7Q8NHU6 1098 aaKnown RBP29.76■■■□□ 2.35
GTF2A1-201ENST00000298173 MYH13Q9UKX3 1938 aa29.75■■■□□ 2.35
GTF2A1-201ENST00000298173 RNF113AO15541 343 aaKnown RBP29.75■■■□□ 2.35
GTF2A1-201ENST00000298173 CC2D2BQ6DHV5 1058 aa29.75■■■□□ 2.35
GTF2A1-201ENST00000298173 DPP8Q6V1X1 898 aaPredicted RBP29.75■■■□□ 2.35
GTF2A1-201ENST00000298173 CD2APQ9Y5K6 639 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms