RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 NCOA7Q8NI08 942 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 KLHDC4Q8TBB5 520 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 LSG1Q9H089 658 aaKnown RBP8.08□□□□□ -1.12
VPS8-201ENST00000287546 ZSCAN16Q9H4T2 348 aaPredicted RBP8.08□□□□□ -1.12
VPS8-201ENST00000287546 HOOK1Q9UJC3 728 aaKnown RBP8.08□□□□□ -1.12
VPS8-201ENST00000287546 MTMR7Q9Y216 660 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 MROH5Q6ZUA9 1318 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 GOLGA6L19H0YKK7 550 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 SLC27A2O14975 620 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 RABL6Q3YEC7 729 aaPredicted RBP8.08□□□□□ -1.12
VPS8-201ENST00000287546 CCDC183Q5T5S1 534 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 FAM89AQ96GI7 184 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 DSCC1Q9BVC3 393 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 UBE2HP62256 183 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 PTPN12Q05209 780 aaKnown RBP8.07□□□□□ -1.12
VPS8-201ENST00000287546 TRIM22Q8IYM9 498 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 SPATA32Q96LK8 384 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 NAPBQ9H115 298 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 PDCL3Q9H2J4 239 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 LMO7Q8WWI1 1683 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 SASH1O94885 1247 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 CCDC192P0DO97 292 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 ITGA6P23229 1130 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 MCM5P33992 734 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 TDO2P48775 406 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 CUL4AQ13619 759 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 GRIPAP1Q4V328 841 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 PPP4R3AQ6IN85 833 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 ZGPATQ8N5A5 531 aaKnown RBP8.07□□□□□ -1.12
VPS8-201ENST00000287546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.07□□□□□ -1.12
VPS8-201ENST00000287546 NIP7Q9Y221 180 aaKnown RBP eCLIP8.07□□□□□ -1.12
VPS8-201ENST00000287546 KDM6AO15550 1401 aaPredicted RBP8.07□□□□□ -1.12
VPS8-201ENST00000287546 RPS6KB1P23443 525 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 PUM3Q15397 648 aaKnown RBP8.07□□□□□ -1.12
VPS8-201ENST00000287546 DHX32Q7L7V1 743 aaKnown RBP8.07□□□□□ -1.12
VPS8-201ENST00000287546 ANKRD18AQ8IVF6 992 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 FAM43AQ8N2R8 423 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 GOLGA6L1Q8N7Z2 621 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 MED1Q15648 1581 aaPredicted RBP8.07□□□□□ -1.12
VPS8-201ENST00000287546 GNAT2P19087 354 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 UNC5CLQ8IV45 518 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 MAP4K1Q92918 833 aa8.07□□□□□ -1.12
VPS8-201ENST00000287546 CCDC196A0A1B0GTZ2 297 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 CCDC69A6NI79 296 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 OFD1O75665 1012 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 F13A1P00488 732 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 CTSWP56202 376 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 APPBP2Q92624 585 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 ACSBG1Q96GR2 724 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 FAM227BQ96M60 508 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 ZSWIM6Q9HCJ5 1215 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 BRMS1Q9HCU9 246 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 RBM27Q9P2N5 1060 aaKnown RBP8.06□□□□□ -1.12
VPS8-201ENST00000287546 CCDC39Q9UFE4 941 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 LRRC37A3O60309 1634 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 AFF2P51816 1311 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 KINO60870 393 aaKnown RBP8.06□□□□□ -1.12
VPS8-201ENST00000287546 TIMM10P62072 90 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 PDIA6Q15084 440 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 PIGBQ92521 554 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 XAGE2Q96GT9 111 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 DBNLQ9UJU6 430 aaKnown RBP8.06□□□□□ -1.12
VPS8-201ENST00000287546 ASAP1Q9ULH1 1129 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 BECN2A8MW95 431 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 RRP12Q5JTH9 1297 aaKnown RBP8.06□□□□□ -1.12
VPS8-201ENST00000287546 NAP1L5Q96NT1 182 aaPredicted RBP8.06□□□□□ -1.12
VPS8-201ENST00000287546 LLPHQ9BRT6 129 aaKnown RBP8.06□□□□□ -1.12
VPS8-201ENST00000287546 CNNM2Q9H8M5 875 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 RAI14Q9P0K7 980 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 CDHR2Q9BYE9 1310 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 BRD1O95696 1058 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 EPS15P42566 896 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 LPIN2Q92539 896 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 NAT10Q9H0A0 1025 aaKnown RBP8.06□□□□□ -1.12
VPS8-201ENST00000287546 SNRKQ9NRH2 765 aa8.06□□□□□ -1.12
VPS8-201ENST00000287546 COL5A2P05997 1499 aaPredicted RBP8.06□□□□□ -1.12
VPS8-201ENST00000287546 COL15A1P39059 1388 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 PHRF1Q9P1Y6 1649 aaKnown RBP8.05□□□□□ -1.12
VPS8-201ENST00000287546 SALL3Q9BXA9 1300 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 ABCC12Q96J65 1359 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 MYO1BO43795 1136 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 NLRP3Q96P20 1036 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 UBAC1Q9BSL1 405 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 ISCA1Q9BUE6 129 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 PALD1Q9ULE6 856 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 STK38Q15208 465 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 BRF1Q92994 677 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 SETDB2Q96T68 719 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 NUP62CLQ9H1M0 184 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 SYCP1Q15431 976 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 SLC9C2Q5TAH2 1124 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 ATL3Q6DD88 541 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 Q6ZUG5 572 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 KIF2CQ99661 725 aa8.05□□□□□ -1.12
VPS8-201ENST00000287546 DDX19AQ9NUU7 478 aaKnown RBP8.05□□□□□ -1.12
VPS8-201ENST00000287546 KRT23Q9C075 422 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 TNMDQ9H2S6 317 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 QTRT2Q9H974 415 aaKnown RBP8.04□□□□□ -1.12
VPS8-201ENST00000287546 SPTY2D1Q68D10 685 aaPredicted RBP8.04□□□□□ -1.12
VPS8-201ENST00000287546 CCDC70Q6NSX1 233 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms