RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 CALM1P0DP23 149 aa14.89□□□□□ -0.03
SMARCA5-201ENST00000283131 CALM2P0DP24 149 aa14.89□□□□□ -0.03
SMARCA5-201ENST00000283131 CALM3P0DP25 149 aa14.89□□□□□ -0.03
SMARCA5-201ENST00000283131 CFAP70Q5T0N1 1121 aa14.89□□□□□ -0.03
SMARCA5-201ENST00000283131 C10orf67Q8IYJ2 551 aa14.89□□□□□ -0.03
SMARCA5-201ENST00000283131 NEK11Q8NG66 645 aa14.89□□□□□ -0.03
SMARCA5-201ENST00000283131 HDAC9Q9UKV0 1011 aa14.89□□□□□ -0.03
SMARCA5-201ENST00000283131 TXNDC9O14530 226 aa14.89□□□□□ -0.03
SMARCA5-201ENST00000283131 CRNKL1Q9BZJ0 848 aaKnown RBP14.89□□□□□ -0.03
SMARCA5-201ENST00000283131 JPH4Q96JJ6 628 aa14.89□□□□□ -0.03
SMARCA5-201ENST00000283131 MCM5P33992 734 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 RNF168Q8IYW5 571 aaPredicted RBP14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 OGFOD1Q8N543 542 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 XRCC6P12956 609 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 CDR2Q01850 454 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 FYCO1Q9BQS8 1478 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 FAM69CQ0P6D2 419 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 AFMP43652 599 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 ZNF622Q969S3 477 aaKnown RBP eCLIP14.88□□□□□ -0.036e-7■■□□□ 13.6
SMARCA5-201ENST00000283131 PRIMPOLQ96LW4 560 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 MYD88Q99836 296 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 SPDYE3A6NKU9 549 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 SLC4A8Q2Y0W8 1093 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 CCDC26Q8TAB7 109 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 SMARCC2Q8TAQ2 1214 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 TNNC1P63316 161 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 KIFAP3Q92845 792 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 BCAP29Q9UHQ4 241 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 ZNF131P52739 623 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 FAM160A1Q05DH4 1040 aa14.88□□□□□ -0.03
SMARCA5-201ENST00000283131 MIER3Q7Z3K6 550 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 NBPF11Q86T75 865 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 TSGA10Q9BZW7 698 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 AKNAD1Q5T1N1 836 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 ASIC1P78348 528 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 BANK1Q8NDB2 785 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 ORC3Q9UBD5 711 aaPredicted RBP14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 LPXNO60711 386 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 RPS6KA2Q15349 733 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 B4GALNT4Q76KP1 1039 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 CCDC42Q96M95 316 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 SPC25Q9HBM1 224 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 NOD1Q9Y239 953 aa14.87□□□□□ -0.03
SMARCA5-201ENST00000283131 TFIP11Q9UBB9 837 aaKnown RBP14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 PPP2R5DQ14738 602 aa14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 ZMAT2Q96NC0 199 aaKnown RBP14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 VPS18Q9P253 973 aa14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 BUB1BO60566 1050 aaPredicted RBP14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 ST5P78524 1137 aa14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 IFIT1BQ5T764 474 aaKnown RBP14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 HEATR3Q7Z4Q2 680 aa14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 DNAI1Q9UI46 699 aa14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 KRT5P13647 590 aa14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 FAM76AQ8TAV0 307 aa14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 LEO1Q8WVC0 666 aaPredicted RBP14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 RUFY3Q7L099 469 aa14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 NCOA7Q8NI08 942 aa14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 CAPZA3Q96KX2 299 aa14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 ZSCAN16Q9H4T2 348 aaPredicted RBP14.86□□□□□ -0.03
SMARCA5-201ENST00000283131 WDR44Q5JSH3 913 aa14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 GNAQP50148 359 aa14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 PRAM1Q96QH2 718 aa14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 BAG1Q99933 345 aaPredicted RBP14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 TMEM57Q8N5G2 664 aa14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 CDK19Q9BWU1 502 aa14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 XAB2Q9HCS7 855 aaKnown RBP14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 GIGYF1O75420 1035 aaPredicted RBP14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 MCM7P33993 719 aa14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 THEMISQ8N1K5 641 aaPredicted RBP14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 I3L4J1 428 aa14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 RBBP5Q15291 538 aaKnown RBP14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 TRIM6Q9C030 488 aaPredicted RBP14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 ZGPATQ8N5A5 531 aaKnown RBP14.85□□□□□ -0.03
SMARCA5-201ENST00000283131 KRT3P12035 628 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 ZBTB17Q13105 803 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 CLSTN2Q9H4D0 955 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 FRMD4BQ9Y2L6 1034 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 UBE2HP62256 183 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 WTAPQ15007 396 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 A0A1B0GUL7 405 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 BAG5Q9UL15 447 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 IRX4P78413 519 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 DNAJC8O75937 253 aaPredicted RBP14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 GJB2P29033 226 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 PALM3A6NDB9 673 aaPredicted RBP14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 SLC12A2P55011 1212 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 FNBP1Q96RU3 617 aa14.84□□□□□ -0.03
SMARCA5-201ENST00000283131 TDRD9Q8NDG6 1382 aaKnown RBP14.83□□□□□ -0.03
SMARCA5-201ENST00000283131 NBPF6Q5VWK0 638 aa14.83□□□□□ -0.03
SMARCA5-201ENST00000283131 TMTC2Q8N394 836 aa14.83□□□□□ -0.03
SMARCA5-201ENST00000283131 CXorf38Q8TB03 319 aa14.83□□□□□ -0.03
SMARCA5-201ENST00000283131 NBPF4Q96M43 638 aa14.83□□□□□ -0.03
SMARCA5-201ENST00000283131 ATP2A3Q93084 1043 aa14.83□□□□□ -0.04
SMARCA5-201ENST00000283131 KRT9P35527 623 aa14.83□□□□□ -0.04
SMARCA5-201ENST00000283131 LGSNQ5TDP6 509 aa14.83□□□□□ -0.04
SMARCA5-201ENST00000283131 LRRC43Q8N309 656 aa14.83□□□□□ -0.04
SMARCA5-201ENST00000283131 FHOD3Q2V2M9 1422 aa14.83□□□□□ -0.04
SMARCA5-201ENST00000283131 TUBBP07437 444 aa14.83□□□□□ -0.04
SMARCA5-201ENST00000283131 CCDC38Q502W7 563 aa14.83□□□□□ -0.04
SMARCA5-201ENST00000283131 MPRIPQ6WCQ1 1025 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms