RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 UBLCP1Q8WVY7 318 aaPredicted RBP9.84□□□□□ -0.83
NIPBL-201ENST00000282516 GAPVD1Q14C86 1478 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 KIFC2Q96AC6 838 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 CCDC42Q96M95 316 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 TCHPQ9BT92 498 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 NOC2LQ9Y3T9 749 aaKnown RBP9.84□□□□□ -0.83
NIPBL-201ENST00000282516 CCDC38Q502W7 563 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 TSPYL2Q9H2G4 693 aaPredicted RBP9.84□□□□□ -0.83
NIPBL-201ENST00000282516 LRRC9Q6ZRR7 1453 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 CDC5LQ99459 802 aaKnown RBP9.84□□□□□ -0.83
NIPBL-201ENST00000282516 CAMSAP2Q08AD1 1489 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 IFT81Q8WYA0 676 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 RBM27Q9P2N5 1060 aaKnown RBP9.84□□□□□ -0.83
NIPBL-201ENST00000282516 BCAP29Q9UHQ4 241 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 ITIH3Q06033 890 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 ZNF365Q70YC5 407 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 SDCCAG8Q86SQ7 713 aaPredicted RBP9.84□□□□□ -0.83
NIPBL-201ENST00000282516 CCDC26Q8TAB7 109 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 HVCN1Q96D96 273 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 DUSP27Q5VZP5 1158 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 MRPS27Q92552 414 aaKnown RBP9.84□□□□□ -0.83
NIPBL-201ENST00000282516 DDX27Q96GQ7 796 aaKnown RBP9.84□□□□□ -0.83
NIPBL-201ENST00000282516 CNNM2Q9H8M5 875 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 ZSCAN23Q3MJ62 389 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 MAP3K21Q5TCX8 1036 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 RAB11FIP4Q86YS3 637 aa9.84□□□□□ -0.83
NIPBL-201ENST00000282516 SYNJ2O15056 1496 aa9.84□□□□□ -0.84
NIPBL-201ENST00000282516 PTGS1P23219 599 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 NSD3Q9BZ95 1437 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 AFAP1L1Q8TED9 768 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 NUTM2BA6NNL0 878 aaPredicted RBP9.83□□□□□ -0.84
NIPBL-201ENST00000282516 NUTM2EB1AL46 878 aaPredicted RBP9.83□□□□□ -0.84
NIPBL-201ENST00000282516 WDR46O15213 610 aaKnown RBP9.83□□□□□ -0.84
NIPBL-201ENST00000282516 ERCC5P28715 1186 aaPredicted RBP9.83□□□□□ -0.84
NIPBL-201ENST00000282516 SLC8A3P57103 927 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 ARID5AQ03989 594 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 TXNDC2Q86VQ3 553 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 NUTM2AQ8IVF1 878 aaPredicted RBP9.83□□□□□ -0.84
NIPBL-201ENST00000282516 HAUS8Q9BT25 410 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 RTL1A6NKG5 1358 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 UBXN1Q04323 297 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 ZBTB17Q13105 803 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 UBL4BQ8N7F7 174 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 KIFAP3Q92845 792 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 POGZQ7Z3K3 1410 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 GNAQP50148 359 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 PDE1CQ14123 709 aaPredicted RBP9.83□□□□□ -0.84
NIPBL-201ENST00000282516 AMOTQ4VCS5 1084 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 ZGPATQ8N5A5 531 aaKnown RBP9.83□□□□□ -0.84
NIPBL-201ENST00000282516 RASA3Q14644 834 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 WTAPQ15007 396 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 WHAMMP3Q1A5X7 153 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 ANO6Q4KMQ2 910 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 CNGA4Q8IV77 575 aa9.83□□□□□ -0.84
NIPBL-201ENST00000282516 EPRSP07814 1512 aaKnown RBP9.83□□□□□ -0.84
NIPBL-201ENST00000282516 ACTN4O43707 911 aaKnown RBP9.82□□□□□ -0.84
NIPBL-201ENST00000282516 KLHL40Q2TBA0 621 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 CROCCP2Q86T23 111 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 ZNF710Q8N1W2 664 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 UAP1Q16222 522 aaPredicted RBP9.82□□□□□ -0.84
NIPBL-201ENST00000282516 MCM10Q7L590 875 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 PTPRCP08575 1304 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 ARHGAP25P42331 645 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 HS2ST1Q7LGA3 356 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 PANK2Q9BZ23 570 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 KCNH5Q8NCM2 988 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 FAM204AQ9H8W3 233 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 HCLS1P14317 486 aaPredicted RBP9.82□□□□□ -0.84
NIPBL-201ENST00000282516 GSDMBQ8TAX9 411 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 RTN1Q16799 776 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 THEMISQ8N1K5 641 aaPredicted RBP9.82□□□□□ -0.84
NIPBL-201ENST00000282516 GBP5Q96PP8 586 aa9.82□□□□□ -0.84
NIPBL-201ENST00000282516 AFMP43652 599 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 DPH6Q7L8W6 267 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 ZNF830Q96NB3 372 aaPredicted RBP9.81□□□□□ -0.84
NIPBL-201ENST00000282516 FRMD4BQ9Y2L6 1034 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 FANCD2Q9BXW9 1451 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 TSPY3P0CV98 308 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 TSPY8P0CW00 308 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 IRX4P78413 519 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 FAM69CQ0P6D2 419 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 VTI1AQ96AJ9 217 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 PPP1R12CQ9BZL4 782 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 ECHDC1Q9NTX5 307 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 CASKIN1Q8WXD9 1431 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 HEATR3Q7Z4Q2 680 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 CCDC65Q8IXS2 484 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 TMTC2Q8N394 836 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 TRMT112Q9UI30 125 aaKnown RBP9.81□□□□□ -0.84
NIPBL-201ENST00000282516 GUCA1BQ9UMX6 200 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 UTP11Q9Y3A2 253 aaKnown RBP9.81□□□□□ -0.84
NIPBL-201ENST00000282516 EFCAB5A4FU69 1503 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 SMARCA5O60264 1052 aaPredicted RBP9.81□□□□□ -0.84
NIPBL-201ENST00000282516 CALML3P27482 149 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 HPDP32754 393 aaPredicted RBP9.81□□□□□ -0.84
NIPBL-201ENST00000282516 TRMT1LQ7Z2T5 733 aaKnown RBP9.81□□□□□ -0.84
NIPBL-201ENST00000282516 WHAMMQ8TF30 809 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 DACT3Q96B18 629 aaPredicted RBP9.81□□□□□ -0.84
NIPBL-201ENST00000282516 MYD88Q99836 296 aa9.81□□□□□ -0.84
NIPBL-201ENST00000282516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms