RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 ROBO2Q9HCK4 1378 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 ERICH2A1L162 156 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 CASQ1P31415 396 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 GPS2Q13227 327 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 HSP90B2PQ58FF3 399 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 CAGE1Q8TC20 777 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 PCDHA7Q9UN72 937 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 UHRF1BP1LA0JNW5 1464 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 CLASP1Q7Z460 1538 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 GIGYF1O75420 1035 aaPredicted RBP13.19□□□□□ -0.3
SKP2-202ENST00000274255 TOB2Q14106 344 aaPredicted RBP13.19□□□□□ -0.3
SKP2-202ENST00000274255 FBXO38Q6PIJ6 1188 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
SKP2-202ENST00000274255 LDHAL6AQ6ZMR3 332 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 VPS37DQ86XT2 251 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 AIDAQ96BJ3 306 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 DRC1Q96MC2 740 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 KCNJ14Q9UNX9 436 aa13.19□□□□□ -0.3
SKP2-202ENST00000274255 B4E1Z4 1266 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 GRAMD1CQ8IYS0 662 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 MIGA1Q8NAN2 632 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 ZNF397Q8NF99 534 aaPredicted RBP13.18□□□□□ -0.3
SKP2-202ENST00000274255 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 ZSCAN16Q9H4T2 348 aaPredicted RBP13.18□□□□□ -0.3
SKP2-202ENST00000274255 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 ZNF202O95125 648 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 FAM160A1Q05DH4 1040 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 MTX1Q13505 466 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 SLC9C2Q5TAH2 1124 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 ZFYVE16Q7Z3T8 1539 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 PNPLA6Q8IY17 1366 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 GOLGA8AA7E2F4 631 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 TPM1P09493 284 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 METAP2P50579 478 aaKnown RBP eCLIP13.18□□□□□ -0.3
SKP2-202ENST00000274255 EVCP57679 992 aa13.18□□□□□ -0.3
SKP2-202ENST00000274255 TSR1Q2NL82 804 aaKnown RBP13.18□□□□□ -0.3
SKP2-202ENST00000274255 THEMISQ8N1K5 641 aaPredicted RBP13.18□□□□□ -0.3
SKP2-202ENST00000274255 MYOM2P54296 1465 aa13.17□□□□□ -0.3
SKP2-202ENST00000274255 UIMC1Q96RL1 719 aa13.17□□□□□ -0.3
SKP2-202ENST00000274255 A0A1B0GUL7 405 aa13.17□□□□□ -0.3
SKP2-202ENST00000274255 FANCCQ00597 558 aa13.17□□□□□ -0.3
SKP2-202ENST00000274255 GCKRQ14397 625 aa13.17□□□□□ -0.3
SKP2-202ENST00000274255 DNAJC21Q5F1R6 531 aaKnown RBP13.17□□□□□ -0.3
SKP2-202ENST00000274255 TMEM67Q5HYA8 995 aa13.17□□□□□ -0.3
SKP2-202ENST00000274255 CCT6AP40227 531 aaKnown RBP13.17□□□□□ -0.3
SKP2-202ENST00000274255 IARSP41252 1262 aaKnown RBP13.17□□□□□ -0.3
SKP2-202ENST00000274255 TTLL7Q6ZT98 887 aa13.17□□□□□ -0.3
SKP2-202ENST00000274255 DHX58Q96C10 678 aa13.17□□□□□ -0.3
SKP2-202ENST00000274255 GTPBP4Q9BZE4 634 aaKnown RBP13.17□□□□□ -0.3
SKP2-202ENST00000274255 CENPHQ9H3R5 247 aa13.17□□□□□ -0.3
SKP2-202ENST00000274255 E7EWF7 191 aa13.16□□□□□ -0.3
SKP2-202ENST00000274255 BMS1Q14692 1282 aaKnown RBP13.16□□□□□ -0.3
SKP2-202ENST00000274255 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
SKP2-202ENST00000274255 AKAP4Q5JQC9 854 aa13.16□□□□□ -0.3
SKP2-202ENST00000274255 PRDM1O75626 825 aa13.16□□□□□ -0.3
SKP2-202ENST00000274255 ZNF790Q6PG37 636 aa13.16□□□□□ -0.3
SKP2-202ENST00000274255 HMG20BQ9P0W2 317 aa13.16□□□□□ -0.3
SKP2-202ENST00000274255 TBC1D2BQ9UPU7 963 aa13.16□□□□□ -0.3
SKP2-202ENST00000274255 UNC13BO14795 1591 aa13.16□□□□□ -0.3
SKP2-202ENST00000274255 KMT5BQ4FZB7 885 aa13.16□□□□□ -0.3
SKP2-202ENST00000274255 CAPZA3Q96KX2 299 aa13.16□□□□□ -0.3
SKP2-202ENST00000274255 PRDM11Q9NQV5 511 aa13.16□□□□□ -0.3
SKP2-202ENST00000274255 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
SKP2-202ENST00000274255 CTAGE5O15320 804 aa13.15□□□□□ -0.3
SKP2-202ENST00000274255 RANBP6O60518 1105 aaKnown RBP13.15□□□□□ -0.3
SKP2-202ENST00000274255 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
SKP2-202ENST00000274255 CASP1P29466 404 aa13.15□□□□□ -0.3
SKP2-202ENST00000274255 NAPBQ9H115 298 aa13.15□□□□□ -0.3
SKP2-202ENST00000274255 LRP2BPQ9P2M1 347 aa13.15□□□□□ -0.3
SKP2-202ENST00000274255 ADORA1P30542 326 aa13.15□□□□□ -0.3
SKP2-202ENST00000274255 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.3
SKP2-202ENST00000274255 JMYQ8N9B5 988 aa13.15□□□□□ -0.3
SKP2-202ENST00000274255 FANCLQ9NW38 375 aa13.15□□□□□ -0.3
SKP2-202ENST00000274255 PRDM4Q9UKN5 801 aa13.15□□□□□ -0.3
SKP2-202ENST00000274255 ST3GAL1Q11201 340 aa13.15□□□□□ -0.31
SKP2-202ENST00000274255 CCDC102BQ68D86 513 aa13.15□□□□□ -0.31
SKP2-202ENST00000274255 NOC3LQ8WTT2 800 aaKnown RBP13.15□□□□□ -0.31
SKP2-202ENST00000274255 KRT28Q7Z3Y7 464 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 SYNE4Q8N205 404 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 TIGD1Q96MW7 591 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 SLC12A7Q9Y666 1083 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 NEURL1BA8MQ27 555 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 EPB41L2O43491 1005 aaKnown RBP13.14□□□□□ -0.31
SKP2-202ENST00000274255 ZAP70P43403 619 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 LRRN4CLQ8ND94 238 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 HOOK1Q9UJC3 728 aaKnown RBP13.14□□□□□ -0.31
SKP2-202ENST00000274255 ATF3P18847 181 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 GSDMDP57764 484 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
SKP2-202ENST00000274255 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 SMYD4Q8IYR2 804 aaPredicted RBP13.14□□□□□ -0.31
SKP2-202ENST00000274255 PSMB7Q99436 277 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 VPS18Q9P253 973 aa13.14□□□□□ -0.31
SKP2-202ENST00000274255 ABCC3O15438 1527 aa13.13□□□□□ -0.31
SKP2-202ENST00000274255 MARCH6O60337 910 aa13.13□□□□□ -0.31
SKP2-202ENST00000274255 WWC2Q6AWC2 1192 aa13.13□□□□□ -0.31
SKP2-202ENST00000274255 NSUN7Q8NE18 718 aaKnown RBP13.13□□□□□ -0.31
SKP2-202ENST00000274255 IRX2Q9BZI1 471 aaPredicted RBP13.13□□□□□ -0.31
SKP2-202ENST00000274255 CTNNA3Q9UI47 895 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms