RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 C16orf71Q8IYS4 520 aaPredicted RBP21.14■□□□□ 0.98
SKP2-201ENST00000274254 XAGE2Q96GT9 111 aa21.14■□□□□ 0.98
SKP2-201ENST00000274254 NEUROD6Q96NK8 337 aa21.14■□□□□ 0.98
SKP2-201ENST00000274254 CCDC8Q9H0W5 538 aaPredicted RBP21.14■□□□□ 0.98
SKP2-201ENST00000274254 TLR7Q9NYK1 1049 aaKnown RBP21.14■□□□□ 0.98
SKP2-201ENST00000274254 C6orf229H3BNL8 230 aa21.14■□□□□ 0.97
SKP2-201ENST00000274254 IFIT2P09913 472 aaKnown RBP21.14■□□□□ 0.97
SKP2-201ENST00000274254 YBX3P16989 372 aaKnown RBP eCLIP21.14■□□□□ 0.972e-7■■□□□ 12.2
SKP2-201ENST00000274254 KLRK1P26718 216 aa21.14■□□□□ 0.97
SKP2-201ENST00000274254 ADORA1P30542 326 aa21.14■□□□□ 0.97
SKP2-201ENST00000274254 DBNDD2Q9BQY9 259 aa21.14■□□□□ 0.97
SKP2-201ENST00000274254 BCL11AQ9H165 835 aa21.14■□□□□ 0.97
SKP2-201ENST00000274254 SALL3Q9BXA9 1300 aa21.13■□□□□ 0.97
SKP2-201ENST00000274254 MED23Q9ULK4 1368 aa21.13■□□□□ 0.97
SKP2-201ENST00000274254 PDE4AP27815 886 aa21.13■□□□□ 0.97
SKP2-201ENST00000274254 FKBP4Q02790 459 aaKnown RBP eCLIP21.13■□□□□ 0.97
SKP2-201ENST00000274254 TXNRD3Q86VQ6 643 aa21.13■□□□□ 0.97
SKP2-201ENST00000274254 SUPT20HQ8NEM7 779 aa21.13■□□□□ 0.97
SKP2-201ENST00000274254 OTUD7AQ8TE49 926 aaPredicted RBP21.13■□□□□ 0.97
SKP2-201ENST00000274254 GPR101Q96P66 508 aaPredicted RBP21.13■□□□□ 0.97
SKP2-201ENST00000274254 NFKBIEO00221 500 aa21.12■□□□□ 0.97
SKP2-201ENST00000274254 LTBP3Q9NS15 1303 aa21.12■□□□□ 0.97
SKP2-201ENST00000274254 FAM84BQ96KN1 310 aaPredicted RBP21.11■□□□□ 0.97
SKP2-201ENST00000274254 EYA3Q99504 573 aa21.11■□□□□ 0.97
SKP2-201ENST00000274254 WASHC4Q2M389 1173 aa21.1■□□□□ 0.97
SKP2-201ENST00000274254 FBXO33Q7Z6M2 555 aa21.1■□□□□ 0.97
SKP2-201ENST00000274254 TAOK3Q9H2K8 898 aa21.1■□□□□ 0.97
SKP2-201ENST00000274254 VPS33BQ9H267 617 aa21.09■□□□□ 0.97
SKP2-201ENST00000274254 MX1P20591 662 aa21.09■□□□□ 0.97
SKP2-201ENST00000274254 GYG1P46976 350 aa21.09■□□□□ 0.97
SKP2-201ENST00000274254 BCAMP50895 628 aa21.09■□□□□ 0.97
SKP2-201ENST00000274254 KIAA2012Q0VF49 1180 aa21.09■□□□□ 0.97
SKP2-201ENST00000274254 CAVIN4Q5BKX8 364 aa21.09■□□□□ 0.97
SKP2-201ENST00000274254 CCDC102BQ68D86 513 aa21.09■□□□□ 0.97
SKP2-201ENST00000274254 PLEKHM2Q8IWE5 1019 aa21.09■□□□□ 0.97
SKP2-201ENST00000274254 ZC3H12CQ9C0D7 883 aaKnown RBP21.09■□□□□ 0.97
SKP2-201ENST00000274254 STAP2Q9UGK3 403 aa21.09■□□□□ 0.97
SKP2-201ENST00000274254 HIBADHP31937 336 aaKnown RBP21.08■□□□□ 0.96
SKP2-201ENST00000274254 PHKA1P46020 1223 aa21.08■□□□□ 0.96
SKP2-201ENST00000274254 PDE1AP54750 535 aa21.08■□□□□ 0.96
SKP2-201ENST00000274254 SKAP1Q86WV1 359 aa21.08■□□□□ 0.96
SKP2-201ENST00000274254 PELP1Q8IZL8 1130 aaKnown RBP21.08■□□□□ 0.96
SKP2-201ENST00000274254 TTC41PQ6P2S7 1318 aa21.07■□□□□ 0.96
SKP2-201ENST00000274254 RIMBP2O15034 1052 aa21.07■□□□□ 0.96
SKP2-201ENST00000274254 ZBTB22O15209 634 aa21.07■□□□□ 0.96
SKP2-201ENST00000274254 CCDC158Q5M9N0 1113 aa21.07■□□□□ 0.96
SKP2-201ENST00000274254 GORABQ5T7V8 394 aa21.07■□□□□ 0.96
SKP2-201ENST00000274254 ZNF512BQ96KM6 892 aaPredicted RBP21.07■□□□□ 0.96
SKP2-201ENST00000274254 OSBPL3Q9H4L5 887 aa21.07■□□□□ 0.96
SKP2-201ENST00000274254 ZNF277Q9NRM2 450 aaPredicted RBP21.07■□□□□ 0.96
SKP2-201ENST00000274254 ECHDC1Q9NTX5 307 aa21.07■□□□□ 0.96
SKP2-201ENST00000274254 ARID4AP29374 1257 aaPredicted RBP21.06■□□□□ 0.96
SKP2-201ENST00000274254 GPR162Q16538 588 aa21.06■□□□□ 0.96
SKP2-201ENST00000274254 AOC3Q16853 763 aa21.06■□□□□ 0.96
SKP2-201ENST00000274254 ARHGAP27Q6ZUM4 889 aa21.06■□□□□ 0.96
SKP2-201ENST00000274254 ZNF804AQ7Z570 1209 aa21.06■□□□□ 0.96
SKP2-201ENST00000274254 GPATCH3Q96I76 525 aa21.06■□□□□ 0.96
SKP2-201ENST00000274254 PPIP5K2O43314 1243 aa21.05■□□□□ 0.96
SKP2-201ENST00000274254 IARSP41252 1262 aaKnown RBP21.05■□□□□ 0.96
SKP2-201ENST00000274254 RASSF7Q02833 373 aa21.05■□□□□ 0.96
SKP2-201ENST00000274254 TSHZ3Q63HK5 1081 aa21.05■□□□□ 0.96
SKP2-201ENST00000274254 VPS37DQ86XT2 251 aa21.05■□□□□ 0.96
SKP2-201ENST00000274254 COA1Q9GZY4 146 aa21.05■□□□□ 0.96
SKP2-201ENST00000274254 UTRNP46939 3433 aa21.05■□□□□ 0.96
SKP2-201ENST00000274254 AOX1Q06278 1338 aa21.05■□□□□ 0.96
SKP2-201ENST00000274254 ATP5JP18859 108 aa21.04■□□□□ 0.96
SKP2-201ENST00000274254 PRELPP51888 382 aa21.04■□□□□ 0.96
SKP2-201ENST00000274254 PI4K2BQ8TCG2 481 aa21.04■□□□□ 0.96
SKP2-201ENST00000274254 CD209Q9NNX6 404 aa21.04■□□□□ 0.96
SKP2-201ENST00000274254 COL4A5P29400 1685 aa21.04■□□□□ 0.96
SKP2-201ENST00000274254 UQCRFS1P1P0C7P4 283 aa21.04■□□□□ 0.96
SKP2-201ENST00000274254 IL1R1P14778 569 aa21.04■□□□□ 0.96
SKP2-201ENST00000274254 TTC39AQ5SRH9 613 aa21.04■□□□□ 0.96
SKP2-201ENST00000274254 TDRD7Q8NHU6 1098 aaKnown RBP21.04■□□□□ 0.96
SKP2-201ENST00000274254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.04■□□□□ 0.96
SKP2-201ENST00000274254 GRIN3BO60391 1043 aa21.03■□□□□ 0.96
SKP2-201ENST00000274254 SCARF1Q14162 830 aa21.03■□□□□ 0.96
SKP2-201ENST00000274254 LARGE2Q8N3Y3 721 aa21.03■□□□□ 0.96
SKP2-201ENST00000274254 GNL3LQ9NVN8 582 aaKnown RBP21.03■□□□□ 0.96
SKP2-201ENST00000274254 CHD4Q14839 1912 aa21.03■□□□□ 0.96
SKP2-201ENST00000274254 AKAP11Q9UKA4 1901 aa21.03■□□□□ 0.96
SKP2-201ENST00000274254 SEMA3EO15041 775 aa21.02■□□□□ 0.96
SKP2-201ENST00000274254 ERC2O15083 957 aa21.02■□□□□ 0.96
SKP2-201ENST00000274254 GLRX3O76003 335 aaKnown RBP21.02■□□□□ 0.96
SKP2-201ENST00000274254 MCAMP43121 646 aa21.02■□□□□ 0.96
SKP2-201ENST00000274254 RASGRF1Q13972 1273 aa21.02■□□□□ 0.96
SKP2-201ENST00000274254 DOK7Q18PE1 504 aa21.02■□□□□ 0.96
SKP2-201ENST00000274254 SBF1O95248 1867 aa21.02■□□□□ 0.96
SKP2-201ENST00000274254 RGS3P49796 1198 aa21.01■□□□□ 0.95
SKP2-201ENST00000274254 PODNQ7Z5L7 613 aa21.01■□□□□ 0.95
SKP2-201ENST00000274254 DBNDD1Q9H9R9 158 aa21.01■□□□□ 0.95
SKP2-201ENST00000274254 COL1A1P02452 1464 aaPredicted RBP21.01■□□□□ 0.95
SKP2-201ENST00000274254 CCDC88AQ3V6T2 1871 aa21.01■□□□□ 0.95
SKP2-201ENST00000274254 ECE2O60344 883 aa21■□□□□ 0.95
SKP2-201ENST00000274254 LMNB1P20700 586 aa21■□□□□ 0.95
SKP2-201ENST00000274254 BOLA2Q9H3K6 86 aa21■□□□□ 0.95
SKP2-201ENST00000274254 HMG20BQ9P0W2 317 aa21■□□□□ 0.95
SKP2-201ENST00000274254 IQSEC3Q9UPP2 1182 aaPredicted RBP21■□□□□ 0.95
SKP2-201ENST00000274254 G3V3G9 751 aa20.99■□□□□ 0.95
SKP2-201ENST00000274254 DCAF8Q5TAQ9 597 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms