RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 KDM6AO15550 1401 aaPredicted RBP11.95□□□□□ -0.5
CPNE9-201ENST00000273027 GOLGA6L6A8MZA4 724 aa11.95□□□□□ -0.5
CPNE9-201ENST00000273027 MAP4K4O95819 1239 aaPredicted RBP11.95□□□□□ -0.5
CPNE9-201ENST00000273027 IGKV5-2P06315 115 aa11.95□□□□□ -0.5
CPNE9-201ENST00000273027 HSPA1AP0DMV8 641 aaKnown RBP11.95□□□□□ -0.5
CPNE9-201ENST00000273027 HSPA1BP0DMV9 641 aaKnown RBP11.95□□□□□ -0.5
CPNE9-201ENST00000273027 PTH1RQ03431 593 aa11.95□□□□□ -0.5
CPNE9-201ENST00000273027 KIAA2012Q0VF49 1180 aa11.95□□□□□ -0.5
CPNE9-201ENST00000273027 NMIQ13287 307 aaPredicted RBP11.95□□□□□ -0.5
CPNE9-201ENST00000273027 CWF19L2Q2TBE0 894 aaKnown RBP11.95□□□□□ -0.5
CPNE9-201ENST00000273027 SMC1BQ8NDV3 1235 aa11.95□□□□□ -0.5
CPNE9-201ENST00000273027 KAZALD1Q96I82 304 aa11.95□□□□□ -0.5
CPNE9-201ENST00000273027 IL25Q9H293 177 aa11.95□□□□□ -0.5
CPNE9-201ENST00000273027 PIM2Q9P1W9 311 aa11.95□□□□□ -0.5
CPNE9-201ENST00000273027 USP25Q9UHP3 1055 aa11.95□□□□□ -0.5
CPNE9-201ENST00000273027 MTMR6Q9Y217 621 aa11.95□□□□□ -0.5
CPNE9-201ENST00000273027 RTCBQ9Y3I0 505 aaKnown RBP11.95□□□□□ -0.5
CPNE9-201ENST00000273027 PTMAP06454 111 aaKnown RBP11.94□□□□□ -0.5
CPNE9-201ENST00000273027 KCNA3P22001 575 aa11.94□□□□□ -0.5
CPNE9-201ENST00000273027 DALRD3Q5D0E6 543 aaKnown RBP11.94□□□□□ -0.5
CPNE9-201ENST00000273027 LARP1BQ659C4 914 aaKnown RBP11.94□□□□□ -0.5
CPNE9-201ENST00000273027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.94□□□□□ -0.5
CPNE9-201ENST00000273027 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
CPNE9-201ENST00000273027 HELLSQ9NRZ9 838 aa11.94□□□□□ -0.5
CPNE9-201ENST00000273027 DDX19AQ9NUU7 478 aaKnown RBP11.94□□□□□ -0.5
CPNE9-201ENST00000273027 KCPQ6ZWJ8 1503 aa11.94□□□□□ -0.5
CPNE9-201ENST00000273027 UBR2Q8IWV8 1755 aa11.94□□□□□ -0.5
CPNE9-201ENST00000273027 SH3TC1Q8TE82 1336 aa11.93□□□□□ -0.5
CPNE9-201ENST00000273027 ANXA1P04083 346 aa11.93□□□□□ -0.5
CPNE9-201ENST00000273027 CCDC192P0DO97 292 aa11.93□□□□□ -0.5
CPNE9-201ENST00000273027 RFC4P35249 363 aa11.93□□□□□ -0.5
CPNE9-201ENST00000273027 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
CPNE9-201ENST00000273027 PROSER3Q2NL68 480 aa11.93□□□□□ -0.5
CPNE9-201ENST00000273027 NOL8Q76FK4 1167 aaKnown RBP11.93□□□□□ -0.5
CPNE9-201ENST00000273027 COPS6Q7L5N1 327 aa11.93□□□□□ -0.5
CPNE9-201ENST00000273027 CCDC83Q8IWF9 413 aa11.93□□□□□ -0.5
CPNE9-201ENST00000273027 XAGE3Q8WTP9 111 aa11.93□□□□□ -0.5
CPNE9-201ENST00000273027 HAUS7Q99871 368 aa11.93□□□□□ -0.5
CPNE9-201ENST00000273027 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.93□□□□□ -0.5
CPNE9-201ENST00000273027 NSFL1CQ9UNZ2 370 aaKnown RBP11.93□□□□□ -0.5
CPNE9-201ENST00000273027 PA2G4Q9UQ80 394 aaKnown RBP11.93□□□□□ -0.5
CPNE9-201ENST00000273027 KIF13BQ9NQT8 1826 aa11.93□□□□□ -0.5
CPNE9-201ENST00000273027 ABCC12Q96J65 1359 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 COL5A3P25940 1745 aaPredicted RBP11.92□□□□□ -0.5
CPNE9-201ENST00000273027 ERVV-2B6SEH9 535 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 RFX5P48382 616 aaPredicted RBP11.92□□□□□ -0.5
CPNE9-201ENST00000273027 HMGN5P82970 282 aaKnown RBP11.92□□□□□ -0.5
CPNE9-201ENST00000273027 ME3Q16798 604 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 MCMDC2Q4G0Z9 681 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 TNNI3KQ59H18 835 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 LRP10Q7Z4F1 713 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 FBXL16Q8N461 479 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 NEK1Q96PY6 1258 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 MYD88Q99836 296 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 DSCC1Q9BVC3 393 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 CFAP45Q9UL16 551 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 CNPY2Q9Y2B0 182 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 FPGT-TNNI3KV9GXZ4 949 aa11.92□□□□□ -0.5
CPNE9-201ENST00000273027 DYNC1I1O14576 645 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 CTAGE5O15320 804 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 KDM4AO75164 1064 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 GADD45BO75293 160 aaPredicted RBP11.91□□□□□ -0.5
CPNE9-201ENST00000273027 TAF5LO75529 589 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 GYS1P13807 737 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 IL15P40933 162 aaPredicted RBP11.91□□□□□ -0.5
CPNE9-201ENST00000273027 PTPN12Q05209 780 aaKnown RBP11.91□□□□□ -0.5
CPNE9-201ENST00000273027 AIMP1Q12904 312 aaKnown RBP11.91□□□□□ -0.5
CPNE9-201ENST00000273027 HSP90AA2PQ14568 343 aaPredicted RBP11.91□□□□□ -0.5
CPNE9-201ENST00000273027 ADCK5Q3MIX3 580 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 FOXD4L5Q5VV16 416 aaPredicted RBP11.91□□□□□ -0.5
CPNE9-201ENST00000273027 KBTBD3Q8NAB2 608 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 NFATC2IPQ8NCF5 419 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 FOXD4L4Q8WXT5 416 aaPredicted RBP11.91□□□□□ -0.5
CPNE9-201ENST00000273027 PRIMPOLQ96LW4 560 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 FUCA2Q9BTY2 467 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 CCDC8Q9H0W5 538 aaPredicted RBP11.91□□□□□ -0.5
CPNE9-201ENST00000273027 BOLA2Q9H3K6 86 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 C10orf71Q711Q0 1435 aa11.91□□□□□ -0.5
CPNE9-201ENST00000273027 MYH15Q9Y2K3 1946 aa11.9□□□□□ -0.5
CPNE9-201ENST00000273027 GOLGA6L4A6NEF3 574 aa11.9□□□□□ -0.5
CPNE9-201ENST00000273027 H7C1W4 665 aa11.9□□□□□ -0.5
CPNE9-201ENST00000273027 CIAO1O76071 339 aa11.9□□□□□ -0.5
CPNE9-201ENST00000273027 VEGFAP15692 232 aaPredicted RBP11.9□□□□□ -0.5
CPNE9-201ENST00000273027 CABP4P57796 275 aa11.9□□□□□ -0.5
CPNE9-201ENST00000273027 SASS6Q6UVJ0 657 aa11.9□□□□□ -0.5
CPNE9-201ENST00000273027 CCDC191Q8NCU4 936 aa11.9□□□□□ -0.5
CPNE9-201ENST00000273027 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.5
CPNE9-201ENST00000273027 TEX13AQ9BXU3 409 aaPredicted RBP11.9□□□□□ -0.5
CPNE9-201ENST00000273027 PDCL3Q9H2J4 239 aa11.9□□□□□ -0.5
CPNE9-201ENST00000273027 KIAA1551Q9HCM1 1747 aa11.9□□□□□ -0.5
CPNE9-201ENST00000273027 A0A087WZG4 1122 aa11.89□□□□□ -0.51
CPNE9-201ENST00000273027 A0A0D9SFI3 127 aa11.89□□□□□ -0.51
CPNE9-201ENST00000273027 VPS37CA5D8V6 355 aaPredicted RBP11.89□□□□□ -0.51
CPNE9-201ENST00000273027 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
CPNE9-201ENST00000273027 ZFYP08048 801 aaPredicted RBP11.89□□□□□ -0.51
CPNE9-201ENST00000273027 ADRA2BP18089 450 aa11.89□□□□□ -0.51
CPNE9-201ENST00000273027 CHRNA5P30532 468 aa11.89□□□□□ -0.51
CPNE9-201ENST00000273027 CASP7P55210 303 aa11.89□□□□□ -0.51
CPNE9-201ENST00000273027 DHX8Q14562 1220 aaKnown RBP11.89□□□□□ -0.51
CPNE9-201ENST00000273027 MAP3K11Q16584 847 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms