RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 SRGAP1Q7Z6B7 1085 aa17.76■□□□□ 0.43
UBR3-201ENST00000272793 GPR161Q8N6U8 529 aaKnown RBP17.76■□□□□ 0.43
UBR3-201ENST00000272793 ABCC8Q09428 1581 aa17.76■□□□□ 0.43
UBR3-201ENST00000272793 DAPK3O43293 454 aa17.76■□□□□ 0.43
UBR3-201ENST00000272793 ARHGAP24Q8N264 748 aa17.76■□□□□ 0.43
UBR3-201ENST00000272793 RNF34Q969K3 372 aa17.76■□□□□ 0.43
UBR3-201ENST00000272793 RBBP5Q15291 538 aaKnown RBP17.76■□□□□ 0.43
UBR3-201ENST00000272793 TNPO1Q92973 898 aaKnown RBP17.76■□□□□ 0.43
UBR3-201ENST00000272793 WAPLQ7Z5K2 1190 aa17.75■□□□□ 0.43
UBR3-201ENST00000272793 ABTB2Q8N961 1025 aa17.75■□□□□ 0.43
UBR3-201ENST00000272793 ZSCAN32Q9NX65 697 aa17.75■□□□□ 0.43
UBR3-201ENST00000272793 EXOC6BQ9Y2D4 811 aa17.75■□□□□ 0.43
UBR3-201ENST00000272793 KRT3P12035 628 aa17.75■□□□□ 0.43
UBR3-201ENST00000272793 CCT4P50991 539 aaKnown RBP17.75■□□□□ 0.43
UBR3-201ENST00000272793 CASC4Q6P4E1 433 aa17.75■□□□□ 0.43
UBR3-201ENST00000272793 TTLL3Q9Y4R7 772 aa17.75■□□□□ 0.43
UBR3-201ENST00000272793 NLRP6P59044 892 aa17.75■□□□□ 0.43
UBR3-201ENST00000272793 DNAI1Q9UI46 699 aa17.75■□□□□ 0.43
UBR3-201ENST00000272793 LMBR1Q8WVP7 490 aa17.75■□□□□ 0.43
UBR3-201ENST00000272793 RHOXF2BP0C7M4 288 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 MICAL1Q8TDZ2 1067 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 RHOXF2Q9BQY4 288 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 RPGRIP1LQ68CZ1 1315 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 STAT6P42226 847 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 METTL24Q5JXM2 366 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 PLCB4Q15147 1175 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 ATF7IPQ6VMQ6 1270 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 NUB1Q9Y5A7 615 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 FAM180AQ6UWF9 173 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 GABPB2Q8TAK5 448 aaPredicted RBP17.74■□□□□ 0.43
UBR3-201ENST00000272793 NUMA1Q14980 2115 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 KRT9P35527 623 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 PDE3AQ14432 1141 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 ACRBPQ8NEB7 543 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 SCAND2PQ9GZW5 306 aaPredicted RBP17.74■□□□□ 0.43
UBR3-201ENST00000272793 DDX41Q9UJV9 622 aaKnown RBP17.74■□□□□ 0.43
UBR3-201ENST00000272793 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
UBR3-201ENST00000272793 CCDC7Q96M83 1385 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 MAN1A1P33908 653 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 KANK3Q6NY19 840 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 HP1BP3Q5SSJ5 553 aaPredicted RBP17.73■□□□□ 0.43
UBR3-201ENST00000272793 GIMAP6Q6P9H5 292 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 MSANTD4Q8NCY6 345 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 PALMDQ9NP74 551 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 BAG2O95816 211 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 MUM1L1Q5H9M0 696 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 CHMP6Q96FZ7 201 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 TACO1Q9BSH4 297 aaKnown RBP17.73■□□□□ 0.43
UBR3-201ENST00000272793 CEP126Q9P2H0 1117 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 I3L4J1 428 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 CROCCQ5TZA2 2017 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 NXNQ6DKJ4 435 aa17.73■□□□□ 0.43
UBR3-201ENST00000272793 UTP11Q9Y3A2 253 aaKnown RBP17.73■□□□□ 0.43
UBR3-201ENST00000272793 MCM7P33993 719 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 VAV2P52735 878 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 TMED1Q13445 227 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 PLS1Q14651 629 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 BAG5Q9UL15 447 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 FAM204AQ9H8W3 233 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 ZNF165P49910 485 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 SDCCAG3Q96C92 435 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 TRIM4Q9C037 500 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 ZNF213O14771 459 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 RAB11FIP3O75154 756 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 KRT5P13647 590 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 ABTB1Q969K4 478 aaPredicted RBP17.72■□□□□ 0.43
UBR3-201ENST00000272793 NFKBIL1Q9UBC1 381 aaPredicted RBP17.72■□□□□ 0.43
UBR3-201ENST00000272793 FBXO2Q9UK22 296 aaPredicted RBP17.72■□□□□ 0.43
UBR3-201ENST00000272793 NUTM2BA6NNL0 878 aaPredicted RBP17.72■□□□□ 0.43
UBR3-201ENST00000272793 NUTM2EB1AL46 878 aaPredicted RBP17.72■□□□□ 0.43
UBR3-201ENST00000272793 WBP4O75554 376 aaKnown RBP17.72■□□□□ 0.43
UBR3-201ENST00000272793 HCLS1P14317 486 aaPredicted RBP17.72■□□□□ 0.43
UBR3-201ENST00000272793 LONP1P36776 959 aaKnown RBP17.72■□□□□ 0.43
UBR3-201ENST00000272793 CCT6AP40227 531 aaKnown RBP17.72■□□□□ 0.43
UBR3-201ENST00000272793 IRX4P78413 519 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 NUTM2AQ8IVF1 878 aaPredicted RBP17.72■□□□□ 0.43
UBR3-201ENST00000272793 TMEM57Q8N5G2 664 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 BOLA2Q9H3K6 86 aa17.72■□□□□ 0.43
UBR3-201ENST00000272793 AFMP43652 599 aa17.71■□□□□ 0.43
UBR3-201ENST00000272793 UBE3BQ7Z3V4 1068 aa17.71■□□□□ 0.43
UBR3-201ENST00000272793 SLC9A5Q14940 896 aa17.71■□□□□ 0.43
UBR3-201ENST00000272793 NACA2Q9H009 215 aa17.71■□□□□ 0.43
UBR3-201ENST00000272793 IFIT3O14879 490 aaKnown RBP17.71■□□□□ 0.43
UBR3-201ENST00000272793 TMEM132EQ6IEE7 984 aa17.71■□□□□ 0.43
UBR3-201ENST00000272793 NBPF8Q3BBV2 869 aa17.71■□□□□ 0.43
UBR3-201ENST00000272793 MIA2Q96PC5 1412 aa17.71■□□□□ 0.43
UBR3-201ENST00000272793 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.43
UBR3-201ENST00000272793 CCDC18Q5T9S5 1454 aa17.71■□□□□ 0.43
UBR3-201ENST00000272793 LRRC23Q53EV4 343 aaPredicted RBP17.71■□□□□ 0.42
UBR3-201ENST00000272793 GTF3C6Q969F1 213 aa17.71■□□□□ 0.42
UBR3-201ENST00000272793 PRIMPOLQ96LW4 560 aa17.71■□□□□ 0.42
UBR3-201ENST00000272793 DDX21Q9NR30 783 aaKnown RBP eCLIP17.71■□□□□ 0.42
UBR3-201ENST00000272793 GOLGA4Q13439 2230 aaKnown RBP17.71■□□□□ 0.42
UBR3-201ENST00000272793 SPC25Q9HBM1 224 aa17.7■□□□□ 0.42
UBR3-201ENST00000272793 GAS2L2Q8NHY3 880 aa17.7■□□□□ 0.42
UBR3-201ENST00000272793 BLVRAP53004 296 aa17.7■□□□□ 0.42
UBR3-201ENST00000272793 SESN3P58005 492 aa17.7■□□□□ 0.42
UBR3-201ENST00000272793 KLHDC4Q8TBB5 520 aa17.7■□□□□ 0.42
UBR3-201ENST00000272793 STK10O94804 968 aaKnown RBP17.7■□□□□ 0.42
UBR3-201ENST00000272793 CTAGE1Q96RT6 745 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms