RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MAP4K1Q92918 833 aa19.73■□□□□ 0.75
TPM1-201ENST00000267996 CD2BP2O95400 341 aaKnown RBP19.72■□□□□ 0.75
TPM1-201ENST00000267996 ST5P78524 1137 aa19.72■□□□□ 0.75
TPM1-201ENST00000267996 MCMDC2Q4G0Z9 681 aa19.72■□□□□ 0.75
TPM1-201ENST00000267996 ZNF589Q86UQ0 364 aaPredicted RBP19.72■□□□□ 0.75
TPM1-201ENST00000267996 IL27Q8NEV9 243 aa19.72■□□□□ 0.75
TPM1-201ENST00000267996 HELLSQ9NRZ9 838 aa19.72■□□□□ 0.75
TPM1-201ENST00000267996 PNPLA7Q6ZV29 1317 aa19.72■□□□□ 0.75
TPM1-201ENST00000267996 RNF113AO15541 343 aaKnown RBP19.71■□□□□ 0.75
TPM1-201ENST00000267996 LRRFIP1Q32MZ4 808 aaKnown RBP19.71■□□□□ 0.75
TPM1-201ENST00000267996 NRXN2Q9P2S2 1712 aa19.71■□□□□ 0.75
TPM1-201ENST00000267996 KLRG2A4D1S0 409 aaPredicted RBP19.71■□□□□ 0.75
TPM1-201ENST00000267996 CHGBP05060 677 aa19.71■□□□□ 0.75
TPM1-201ENST00000267996 ZFYP08048 801 aaPredicted RBP19.71■□□□□ 0.75
TPM1-201ENST00000267996 NECTIN1Q15223 517 aa19.71■□□□□ 0.75
TPM1-201ENST00000267996 PI16Q6UXB8 463 aa19.71■□□□□ 0.75
TPM1-201ENST00000267996 GRAPQ13588 217 aa19.7■□□□□ 0.74
TPM1-201ENST00000267996 GRAPLQ8TC17 118 aaPredicted RBP19.7■□□□□ 0.74
TPM1-201ENST00000267996 ANKRD2Q9GZV1 360 aa19.7■□□□□ 0.74
TPM1-201ENST00000267996 HMG20BQ9P0W2 317 aa19.7■□□□□ 0.74
TPM1-201ENST00000267996 SNX14Q9Y5W7 946 aa19.7■□□□□ 0.74
TPM1-201ENST00000267996 ZNF804BA4D1E1 1349 aa19.7■□□□□ 0.74
TPM1-201ENST00000267996 CYP2E1P05181 493 aaPredicted RBP19.69■□□□□ 0.74
TPM1-201ENST00000267996 TTF1Q15361 905 aaPredicted RBP19.69■□□□□ 0.74
TPM1-201ENST00000267996 SEC62Q99442 399 aaKnown RBP19.69■□□□□ 0.74
TPM1-201ENST00000267996 RBM8AQ9Y5S9 174 aaKnown RBP19.69■□□□□ 0.74
TPM1-201ENST00000267996 K7ELQ4 463 aaPredicted RBP19.68■□□□□ 0.74
TPM1-201ENST00000267996 EN1Q05925 392 aaPredicted RBP19.68■□□□□ 0.74
TPM1-201ENST00000267996 EZH2Q15910 746 aaKnown RBP19.68■□□□□ 0.74
TPM1-201ENST00000267996 RASEFQ8IZ41 740 aa19.68■□□□□ 0.74
TPM1-201ENST00000267996 MYH7P12883 1935 aa19.68■□□□□ 0.74
TPM1-201ENST00000267996 ST18O60284 1047 aa19.68■□□□□ 0.74
TPM1-201ENST00000267996 HOXA10P31260 410 aaPredicted RBP19.68■□□□□ 0.74
TPM1-201ENST00000267996 BCAMP50895 628 aa19.68■□□□□ 0.74
TPM1-201ENST00000267996 RASGRF1Q13972 1273 aa19.68■□□□□ 0.74
TPM1-201ENST00000267996 SPATA5Q8NB90 893 aa19.67■□□□□ 0.74
TPM1-201ENST00000267996 PIH1D3Q9NQM4 214 aaKnown RBP19.67■□□□□ 0.74
TPM1-201ENST00000267996 QSER1Q2KHR3 1735 aa19.66■□□□□ 0.74
TPM1-201ENST00000267996 ZBTB22O15209 634 aa19.66■□□□□ 0.74
TPM1-201ENST00000267996 SLC15A2Q16348 729 aa19.66■□□□□ 0.74
TPM1-201ENST00000267996 SLFNL1Q499Z3 407 aa19.66■□□□□ 0.74
TPM1-201ENST00000267996 ANO8Q9HCE9 1232 aaPredicted RBP19.66■□□□□ 0.74
TPM1-201ENST00000267996 MAST3O60307 1309 aa19.66■□□□□ 0.74
TPM1-201ENST00000267996 WTIPA6NIX2 430 aaPredicted RBP19.65■□□□□ 0.74
TPM1-201ENST00000267996 NEK4P51957 841 aa19.65■□□□□ 0.74
TPM1-201ENST00000267996 CREB3L3Q68CJ9 461 aa19.65■□□□□ 0.74
TPM1-201ENST00000267996 ZSCAN25Q6NSZ9 544 aa19.65■□□□□ 0.74
TPM1-201ENST00000267996 PRPF40BQ6NWY9 871 aaKnown RBP19.65■□□□□ 0.74
TPM1-201ENST00000267996 CCDC129Q6ZRS4 1044 aa19.65■□□□□ 0.74
TPM1-201ENST00000267996 FBXO33Q7Z6M2 555 aa19.65■□□□□ 0.74
TPM1-201ENST00000267996 APPBP2Q92624 585 aa19.65■□□□□ 0.74
TPM1-201ENST00000267996 RPGRQ92834 1020 aaKnown RBP19.65■□□□□ 0.74
TPM1-201ENST00000267996 OSBP2Q969R2 916 aa19.65■□□□□ 0.74
TPM1-201ENST00000267996 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.65■□□□□ 0.74
TPM1-201ENST00000267996 ADD2P35612 726 aa19.65■□□□□ 0.74
TPM1-201ENST00000267996 RBM17Q96I25 401 aaKnown RBP19.65■□□□□ 0.74
TPM1-201ENST00000267996 FAM84BQ96KN1 310 aaPredicted RBP19.65■□□□□ 0.74
TPM1-201ENST00000267996 CRAMP1Q96RY5 1269 aa19.65■□□□□ 0.74
TPM1-201ENST00000267996 BRIP1Q9BX63 1249 aa19.65■□□□□ 0.74
TPM1-201ENST00000267996 TM6SF1Q9BZW5 370 aa19.65■□□□□ 0.74
TPM1-201ENST00000267996 ANKRD31Q8N7Z5 1873 aa19.64■□□□□ 0.74
TPM1-201ENST00000267996 DOCK2Q92608 1830 aa19.64■□□□□ 0.73
TPM1-201ENST00000267996 SLC27A2O14975 620 aa19.64■□□□□ 0.73
TPM1-201ENST00000267996 UBE3CQ15386 1083 aa19.64■□□□□ 0.73
TPM1-201ENST00000267996 TSGA10IPQ3SY00 556 aa19.64■□□□□ 0.73
TPM1-201ENST00000267996 DSCC1Q9BVC3 393 aa19.64■□□□□ 0.73
TPM1-201ENST00000267996 U3KPZ7 1027 aaPredicted RBP19.64■□□□□ 0.73
TPM1-201ENST00000267996 IRS2Q9Y4H2 1338 aa19.64■□□□□ 0.73
TPM1-201ENST00000267996 M0R2C6 588 aa19.63■□□□□ 0.73
TPM1-201ENST00000267996 GYG1P46976 350 aa19.63■□□□□ 0.73
TPM1-201ENST00000267996 MCM2P49736 904 aa19.63■□□□□ 0.73
TPM1-201ENST00000267996 GNL3LQ9NVN8 582 aaKnown RBP19.63■□□□□ 0.73
TPM1-201ENST00000267996 STK32BQ9NY57 414 aa19.63■□□□□ 0.73
TPM1-201ENST00000267996 MYO5AQ9Y4I1 1855 aaKnown RBP19.63■□□□□ 0.73
TPM1-201ENST00000267996 BBOX1O75936 387 aa19.62■□□□□ 0.73
TPM1-201ENST00000267996 MMP10P09238 476 aa19.62■□□□□ 0.73
TPM1-201ENST00000267996 ZKSCAN1P17029 563 aaPredicted RBP19.62■□□□□ 0.73
TPM1-201ENST00000267996 KCNJ4P48050 445 aa19.62■□□□□ 0.73
TPM1-201ENST00000267996 CAVIN4Q5BKX8 364 aa19.62■□□□□ 0.73
TPM1-201ENST00000267996 RNF20Q5VTR2 975 aa19.62■□□□□ 0.73
TPM1-201ENST00000267996 LEMD3Q9Y2U8 911 aa19.62■□□□□ 0.73
TPM1-201ENST00000267996 BAG6P46379 1132 aa19.62■□□□□ 0.73
TPM1-201ENST00000267996 TCRBV5S4A2TA0A5A2 114 aa19.61■□□□□ 0.73
TPM1-201ENST00000267996 SEMA3EO15041 775 aa19.61■□□□□ 0.73
TPM1-201ENST00000267996 PDE6AP16499 860 aa19.61■□□□□ 0.73
TPM1-201ENST00000267996 DDIT3P35638 169 aa19.61■□□□□ 0.73
TPM1-201ENST00000267996 SLC9C2Q5TAH2 1124 aa19.61■□□□□ 0.73
TPM1-201ENST00000267996 TTC14Q96N46 770 aa19.61■□□□□ 0.73
TPM1-201ENST00000267996 UPF3BQ9BZI7 483 aaKnown RBP19.61■□□□□ 0.73
TPM1-201ENST00000267996 ZSWIM6Q9HCJ5 1215 aa19.61■□□□□ 0.73
TPM1-201ENST00000267996 PARP3Q9Y6F1 533 aa19.61■□□□□ 0.73
TPM1-201ENST00000267996 RPAP1Q9BWH6 1393 aaPredicted RBP19.61■□□□□ 0.73
TPM1-201ENST00000267996 XDHP47989 1333 aa19.6■□□□□ 0.73
TPM1-201ENST00000267996 PDS5AQ29RF7 1337 aaKnown RBP19.6■□□□□ 0.73
TPM1-201ENST00000267996 IDH1O75874 414 aaKnown RBP19.6■□□□□ 0.73
TPM1-201ENST00000267996 HSPD1P10809 573 aaKnown RBP19.6■□□□□ 0.73
TPM1-201ENST00000267996 KLRK1P26718 216 aa19.6■□□□□ 0.73
TPM1-201ENST00000267996 SF3B2Q13435 895 aaKnown RBP19.6■□□□□ 0.73
TPM1-201ENST00000267996 WASHC4Q2M389 1173 aa19.6■□□□□ 0.73
TPM1-201ENST00000267996 VPS53Q5VIR6 699 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms