RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ZNF589Q86UQ0 364 aaPredicted RBP11.06□□□□□ -0.64
SSR3-201ENST00000265044 RASEFQ8IZ41 740 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 PLA2G12BQ9BX93 195 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 ERICH2A1L162 156 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 DTNBO60941 627 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 SSFA2P28290 1259 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 DZIP1Q86YF9 867 aaKnown RBP11.06□□□□□ -0.64
SSR3-201ENST00000265044 LSG1Q9H089 658 aaKnown RBP11.06□□□□□ -0.64
SSR3-201ENST00000265044 LRRC37A3O60309 1634 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 SALL3Q9BXA9 1300 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 DISP2A7MBM2 1401 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 SLC27A2O14975 620 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 CHST3Q7LGC8 479 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 NECAB1Q8N987 351 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 SPATA5Q8NB90 893 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 ZSCAN31Q96LW9 406 aaPredicted RBP11.05□□□□□ -0.64
SSR3-201ENST00000265044 HELLSQ9NRZ9 838 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 MCM4P33991 863 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
SSR3-201ENST00000265044 AMOTL1Q8IY63 956 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 RIPOR2Q9Y4F9 1068 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 PARP3Q9Y6F1 533 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 NHSL1Q5SYE7 1610 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 PPFIA3O75145 1194 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 CHGBP05060 677 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 SERPINB2P05120 415 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 RC3H1Q5TC82 1133 aaKnown RBP11.05□□□□□ -0.64
SSR3-201ENST00000265044 TNPO1Q92973 898 aaKnown RBP11.05□□□□□ -0.64
SSR3-201ENST00000265044 ANKRD2Q9GZV1 360 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 IL25Q9H293 177 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 ATP6V1DQ9Y5K8 247 aa11.05□□□□□ -0.64
SSR3-201ENST00000265044 SCN11AQ9UI33 1791 aa11.04□□□□□ -0.64
SSR3-201ENST00000265044 APPBP2Q92624 585 aa11.04□□□□□ -0.64
SSR3-201ENST00000265044 DDX11Q96FC9 970 aa11.04□□□□□ -0.64
SSR3-201ENST00000265044 MRC1P22897 1456 aa11.04□□□□□ -0.64
SSR3-201ENST00000265044 SLIT2O94813 1529 aa11.04□□□□□ -0.64
SSR3-201ENST00000265044 GPAA1O43292 621 aa11.04□□□□□ -0.64
SSR3-201ENST00000265044 NTSR2O95665 410 aa11.04□□□□□ -0.64
SSR3-201ENST00000265044 LARP1BQ659C4 914 aaKnown RBP11.04□□□□□ -0.64
SSR3-201ENST00000265044 CELF1Q92879 486 aaKnown RBP11.04□□□□□ -0.64
SSR3-201ENST00000265044 BRF1Q92994 677 aa11.04□□□□□ -0.64
SSR3-201ENST00000265044 WWC3Q9ULE0 1092 aa11.04□□□□□ -0.64
SSR3-201ENST00000265044 BCL9LQ86UU0 1499 aa11.04□□□□□ -0.64
SSR3-201ENST00000265044 PTMSP20962 102 aa11.04□□□□□ -0.64
SSR3-201ENST00000265044 HIBADHP31937 336 aaKnown RBP11.04□□□□□ -0.64
SSR3-201ENST00000265044 CNTNAP4Q9C0A0 1308 aa11.03□□□□□ -0.64
SSR3-201ENST00000265044 KDM3BQ7LBC6 1761 aa11.03□□□□□ -0.64
SSR3-201ENST00000265044 NFIXQ14938 502 aa11.03□□□□□ -0.64
SSR3-201ENST00000265044 SLC4A8Q2Y0W8 1093 aa11.03□□□□□ -0.64
SSR3-201ENST00000265044 ZNF532Q9HCE3 1301 aa11.03□□□□□ -0.64
SSR3-201ENST00000265044 TRAK2O60296 914 aa11.03□□□□□ -0.64
SSR3-201ENST00000265044 HMGB1P09429 215 aaKnown RBP11.03□□□□□ -0.64
SSR3-201ENST00000265044 CCT2P78371 535 aaKnown RBP11.03□□□□□ -0.64
SSR3-201ENST00000265044 SCARF1Q14162 830 aa11.03□□□□□ -0.64
SSR3-201ENST00000265044 ADCK5Q3MIX3 580 aa11.03□□□□□ -0.64
SSR3-201ENST00000265044 NAA16Q6N069 864 aaPredicted RBP11.03□□□□□ -0.64
SSR3-201ENST00000265044 RUFY3Q7L099 469 aa11.03□□□□□ -0.64
SSR3-201ENST00000265044 MTMR7Q9Y216 660 aa11.03□□□□□ -0.64
SSR3-201ENST00000265044 SLC4A4Q9Y6R1 1079 aa11.03□□□□□ -0.64
SSR3-201ENST00000265044 PRPF40AO75400 957 aaKnown RBP11.02□□□□□ -0.64
SSR3-201ENST00000265044 MCAMP43121 646 aa11.02□□□□□ -0.64
SSR3-201ENST00000265044 GSE1Q14687 1217 aa11.02□□□□□ -0.64
SSR3-201ENST00000265044 SART3Q15020 963 aaKnown RBP11.02□□□□□ -0.64
SSR3-201ENST00000265044 MAP4K1Q92918 833 aa11.02□□□□□ -0.64
SSR3-201ENST00000265044 CHMP4CQ96CF2 233 aa11.02□□□□□ -0.64
SSR3-201ENST00000265044 USP42Q9H9J4 1324 aaKnown RBP11.02□□□□□ -0.64
SSR3-201ENST00000265044 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
SSR3-201ENST00000265044 MBD4O95243 580 aa11.02□□□□□ -0.65
SSR3-201ENST00000265044 RAB11FIP4Q86YS3 637 aa11.02□□□□□ -0.65
SSR3-201ENST00000265044 RBM17Q96I25 401 aaKnown RBP11.02□□□□□ -0.65
SSR3-201ENST00000265044 KIF2CQ99661 725 aa11.02□□□□□ -0.65
SSR3-201ENST00000265044 SH2B1Q9NRF2 756 aaPredicted RBP11.02□□□□□ -0.65
SSR3-201ENST00000265044 UFL1O94874 794 aa11.02□□□□□ -0.65
SSR3-201ENST00000265044 SLC27A3Q5K4L6 730 aa11.02□□□□□ -0.65
SSR3-201ENST00000265044 Q6ZUG5 572 aa11.02□□□□□ -0.65
SSR3-201ENST00000265044 FERMT3Q86UX7 667 aa11.02□□□□□ -0.65
SSR3-201ENST00000265044 PDCP20941 246 aa11.01□□□□□ -0.65
SSR3-201ENST00000265044 VPS53Q5VIR6 699 aa11.01□□□□□ -0.65
SSR3-201ENST00000265044 TTLL5Q6EMB2 1281 aa11.01□□□□□ -0.65
SSR3-201ENST00000265044 NLGN1Q8N2Q7 840 aa11.01□□□□□ -0.65
SSR3-201ENST00000265044 ARMT1Q9H993 441 aa11.01□□□□□ -0.65
SSR3-201ENST00000265044 STK32BQ9NY57 414 aa11.01□□□□□ -0.65
SSR3-201ENST00000265044 WDR33Q9C0J8 1336 aaKnown RBP11.01□□□□□ -0.65
SSR3-201ENST00000265044 HSPD1P10809 573 aaKnown RBP11.01□□□□□ -0.65
SSR3-201ENST00000265044 EPB41L2O43491 1005 aaKnown RBP11.01□□□□□ -0.65
SSR3-201ENST00000265044 USP5P45974 858 aa11.01□□□□□ -0.65
SSR3-201ENST00000265044 NCOA7Q8NI08 942 aa11.01□□□□□ -0.65
SSR3-201ENST00000265044 OSBP2Q969R2 916 aa11.01□□□□□ -0.65
SSR3-201ENST00000265044 BSDC1Q9NW68 430 aaPredicted RBP11.01□□□□□ -0.65
SSR3-201ENST00000265044 DENND2AQ9ULE3 1009 aa11.01□□□□□ -0.65
SSR3-201ENST00000265044 PDE6AP16499 860 aa11□□□□□ -0.65
SSR3-201ENST00000265044 AKAP17AQ02040 695 aaKnown RBP11□□□□□ -0.65
SSR3-201ENST00000265044 RASGRF1Q13972 1273 aa11□□□□□ -0.65
SSR3-201ENST00000265044 UBE4AQ14139 1066 aa11□□□□□ -0.65
SSR3-201ENST00000265044 ZMYM1Q5SVZ6 1142 aa11□□□□□ -0.65
SSR3-201ENST00000265044 ZC3H12CQ9C0D7 883 aaKnown RBP11□□□□□ -0.65
SSR3-201ENST00000265044 MINPP1Q9UNW1 487 aa11□□□□□ -0.65
SSR3-201ENST00000265044 FIBPO43427 364 aa11□□□□□ -0.65
SSR3-201ENST00000265044 ADRA2BP18089 450 aa11□□□□□ -0.65
SSR3-201ENST00000265044 GJB2P29033 226 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms