RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 GPR161Q8N6U8 529 aaKnown RBP14.36□□□□□ -0.11
CHMP2B-201ENST00000263780 ZNF274Q96GC6 653 aaPredicted RBP14.36□□□□□ -0.11
CHMP2B-201ENST00000263780 TLR7Q9NYK1 1049 aaKnown RBP14.36□□□□□ -0.11
CHMP2B-201ENST00000263780 NAP1L2Q9ULW6 460 aaPredicted RBP14.36□□□□□ -0.11
CHMP2B-201ENST00000263780 MED1Q15648 1581 aaPredicted RBP14.36□□□□□ -0.11
CHMP2B-201ENST00000263780 URI1O94763 535 aaPredicted RBP14.36□□□□□ -0.11
CHMP2B-201ENST00000263780 CYP21A2P08686 494 aa14.36□□□□□ -0.11
CHMP2B-201ENST00000263780 STK38Q15208 465 aa14.36□□□□□ -0.11
CHMP2B-201ENST00000263780 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
CHMP2B-201ENST00000263780 AK7Q96M32 723 aa14.36□□□□□ -0.11
CHMP2B-201ENST00000263780 AKAP4Q5JQC9 854 aa14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 GORABQ5T7V8 394 aa14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 JAKMIP3Q5VZ66 844 aa14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 LTV1Q96GA3 475 aaPredicted RBP14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 AGXT2Q9BYV1 514 aa14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 ADAMTS13Q76LX8 1427 aa14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 ANXA1P04083 346 aa14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 FANCCQ00597 558 aa14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 PDE4CQ08493 712 aa14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 CWF19L2Q2TBE0 894 aaKnown RBP14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 DPCR1Q3MIW9 517 aa14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 UBXN6Q9BZV1 441 aa14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 FTOQ9C0B1 505 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHMP2B-201ENST00000263780 CTDNEP1O95476 244 aa14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 LGR6Q9HBX8 967 aa14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 POLR3GO15318 223 aaPredicted RBP14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 CAPN2P17655 700 aa14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 NDUFA8P51970 172 aa14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 LINC00301Q8NCQ3 95 aa14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 FBXW7Q969H0 707 aa14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 ARFGAP3Q9NP61 516 aa14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 POLR3EQ9NVU0 708 aa14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 MRC1P22897 1456 aa14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 SALL1Q9NSC2 1324 aa14.34□□□□□ -0.11
CHMP2B-201ENST00000263780 A0A1B0GVL5 298 aa14.33□□□□□ -0.11
CHMP2B-201ENST00000263780 PLEKHO1Q53GL0 409 aaPredicted RBP14.33□□□□□ -0.11
CHMP2B-201ENST00000263780 TRIM65Q6PJ69 517 aa14.33□□□□□ -0.11
CHMP2B-201ENST00000263780 BRAPQ7Z569 592 aa14.33□□□□□ -0.11
CHMP2B-201ENST00000263780 LRRN4CLQ8ND94 238 aa14.33□□□□□ -0.11
CHMP2B-201ENST00000263780 KAZALD1Q96I82 304 aa14.33□□□□□ -0.11
CHMP2B-201ENST00000263780 DSCC1Q9BVC3 393 aa14.33□□□□□ -0.11
CHMP2B-201ENST00000263780 SIL1Q9H173 461 aa14.33□□□□□ -0.11
CHMP2B-201ENST00000263780 TMX1Q9H3N1 280 aa14.33□□□□□ -0.11
CHMP2B-201ENST00000263780 TNRQ92752 1358 aa14.33□□□□□ -0.12
CHMP2B-201ENST00000263780 EVCP57679 992 aa14.33□□□□□ -0.12
CHMP2B-201ENST00000263780 EXOSC10Q01780 885 aaKnown RBP14.33□□□□□ -0.12
CHMP2B-201ENST00000263780 RAD51AP2Q09MP3 1159 aa14.33□□□□□ -0.12
CHMP2B-201ENST00000263780 APOBRQ0VD83 1088 aa14.33□□□□□ -0.12
CHMP2B-201ENST00000263780 NEXNQ0ZGT2 675 aa14.33□□□□□ -0.12
CHMP2B-201ENST00000263780 CARD6Q9BX69 1037 aa14.33□□□□□ -0.12
CHMP2B-201ENST00000263780 PSD3Q9NYI0 1048 aa14.33□□□□□ -0.12
CHMP2B-201ENST00000263780 SH3TC1Q8TE82 1336 aa14.33□□□□□ -0.12
CHMP2B-201ENST00000263780 KDM3BQ7LBC6 1761 aa14.33□□□□□ -0.12
CHMP2B-201ENST00000263780 DIP2BQ9P265 1576 aa14.33□□□□□ -0.12
CHMP2B-201ENST00000263780 A0A087WWV3 80 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 SPTLC2O15270 562 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 ARHGAP6O43182 974 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 KCNQ3O43525 872 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 DHX16O60231 1041 aaKnown RBP14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 CASQ1P31415 396 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 FOSBP53539 338 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 UBASH3AP57075 661 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 SMC1AQ14683 1233 aaKnown RBP14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 NCAPHQ15003 741 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 RGS22Q8NE09 1264 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 HELLSQ9NRZ9 838 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 FEZ2Q9UHY8 353 aaPredicted RBP14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 TSPOAP1O95153 1857 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 ZNF202O95125 648 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 AMOTQ4VCS5 1084 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 CC2D1AQ6P1N0 951 aaPredicted RBP14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 SYNE3Q6ZMZ3 975 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 HAUS7Q99871 368 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 LRRC2Q9BYS8 371 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 COPRSQ9NQ92 184 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 MYH15Q9Y2K3 1946 aa14.32□□□□□ -0.12
CHMP2B-201ENST00000263780 PIK3C2AO00443 1686 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 SERPINC1P01008 464 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 CMA1P23946 247 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 OAS2P29728 719 aaKnown RBP14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 CCT2P78371 535 aaKnown RBP14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 MLECQ14165 292 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 RABGGTAQ92696 567 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 EXOC4Q96A65 974 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 FMNL2Q96PY5 1086 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 DDX21Q9NR30 783 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 PARP3Q9Y6F1 533 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 COL15A1P39059 1388 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 CARMIL3Q8ND23 1372 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 ZNF609O15014 1411 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 TOP1P11387 765 aaKnown RBP14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 PDIA3P30101 505 aaKnown RBP14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 TUBB4BP68371 445 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 TNNI3KQ59H18 835 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 KRBA2Q6ZNG9 492 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 ANKARQ7Z5J8 1434 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 ILDR1Q86SU0 546 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms