RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PIK3R4Q99570 1358 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 CAVIN2O95810 425 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 RASSF4Q9H2L5 321 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 NAA25Q14CX7 972 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 UBLCP1Q8WVY7 318 aaPredicted RBP13.7□□□□□ -0.22
SMG6-201ENST00000263073 ERCC3P19447 782 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 C6orf163Q5TEZ5 329 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 RPGRIP1LQ68CZ1 1315 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 ZPR1O75312 459 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 PLS1Q14651 629 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 GSTA5Q7RTV2 222 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 PPP4R3AQ6IN85 833 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 CCDC129Q6ZRS4 1044 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 SMAP1Q8IYB5 467 aaPredicted RBP13.7□□□□□ -0.22
SMG6-201ENST00000263073 MRRFQ96E11 262 aaKnown RBP13.7□□□□□ -0.22
SMG6-201ENST00000263073 BICD1Q96G01 975 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 RMND1Q9NWS8 449 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 MAPK8IP1Q9UQF2 711 aa13.7□□□□□ -0.22
SMG6-201ENST00000263073 KIF5AQ12840 1032 aa13.69□□□□□ -0.22
SMG6-201ENST00000263073 GRIPAP1Q4V328 841 aa13.69□□□□□ -0.22
SMG6-201ENST00000263073 CARD6Q9BX69 1037 aa13.69□□□□□ -0.22
SMG6-201ENST00000263073 DHX29Q7Z478 1369 aaKnown RBP13.69□□□□□ -0.22
SMG6-201ENST00000263073 KIF20AO95235 890 aa13.69□□□□□ -0.22
SMG6-201ENST00000263073 CETN1Q12798 172 aa13.69□□□□□ -0.22
SMG6-201ENST00000263073 CEP85Q6P2H3 762 aa13.69□□□□□ -0.22
SMG6-201ENST00000263073 KIF5BP33176 963 aa13.69□□□□□ -0.22
SMG6-201ENST00000263073 TTF1Q15361 905 aaPredicted RBP13.69□□□□□ -0.22
SMG6-201ENST00000263073 EPRSP07814 1512 aaKnown RBP13.69□□□□□ -0.22
SMG6-201ENST00000263073 CCDC63Q8NA47 563 aa13.69□□□□□ -0.22
SMG6-201ENST00000263073 CWF19L2Q2TBE0 894 aaKnown RBP13.68□□□□□ -0.22
SMG6-201ENST00000263073 FAM76AQ8TAV0 307 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 CCDC42Q96M95 316 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 BAG1Q99933 345 aaPredicted RBP13.68□□□□□ -0.22
SMG6-201ENST00000263073 CTNND2Q9UQB3 1225 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 RUFY3Q7L099 469 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 DPH6Q7L8W6 267 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 GDAP1L1Q96MZ0 367 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 NSRP1Q9H0G5 558 aaKnown RBP13.68□□□□□ -0.22
SMG6-201ENST00000263073 TMOD2Q9NZR1 351 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 F8W031 263 aaPredicted RBP13.68□□□□□ -0.22
SMG6-201ENST00000263073 WASLO00401 505 aaPredicted RBP13.68□□□□□ -0.22
SMG6-201ENST00000263073 TBCAO75347 108 aaKnown RBP13.68□□□□□ -0.22
SMG6-201ENST00000263073 CCDC50Q8IVM0 306 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 MIGA1Q8NAN2 632 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 SELENOOQ9BVL4 669 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 NOS1P29475 1434 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 CYP7A1P22680 504 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 KCNH5Q8NCM2 988 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 ATP8B2P98198 1209 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 ANKS4BQ8N8V4 417 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 XAGE3Q8WTP9 111 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 PSMB7Q99436 277 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 JAG2Q9Y219 1238 aa13.68□□□□□ -0.22
SMG6-201ENST00000263073 EEF2P13639 858 aaKnown RBP13.67□□□□□ -0.22
SMG6-201ENST00000263073 ZBTB16Q05516 673 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 PDE4BQ07343 736 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 SLC9C2Q5TAH2 1124 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 TBC1D5Q92609 795 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 AMOTQ4VCS5 1084 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 C6orf229H3BNL8 230 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 KRT86O43790 486 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 TSPY3P0CV98 308 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 TSPY8P0CW00 308 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 HDXQ7Z353 690 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 VPS16Q9H269 839 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 CHMLP26374 656 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 OTUD7BQ6GQQ9 843 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 ZNF608Q9ULD9 1512 aaPredicted RBP13.67□□□□□ -0.22
SMG6-201ENST00000263073 IFI16Q16666 785 aaKnown RBP13.67□□□□□ -0.22
SMG6-201ENST00000263073 CCDC122Q5T0U0 273 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 COPS6Q7L5N1 327 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 CHAMP1Q96JM3 812 aa13.67□□□□□ -0.22
SMG6-201ENST00000263073 IQCGQ9H095 443 aaKnown RBP13.67□□□□□ -0.22
SMG6-201ENST00000263073 LMBR1LQ6UX01 489 aa13.66□□□□□ -0.22
SMG6-201ENST00000263073 ANKRD13DQ6ZTN6 518 aa13.66□□□□□ -0.22
SMG6-201ENST00000263073 PSMA7O14818 248 aa13.66□□□□□ -0.22
SMG6-201ENST00000263073 NCOA5Q9HCD5 579 aaKnown RBP13.66□□□□□ -0.22
SMG6-201ENST00000263073 ZNF652Q9Y2D9 606 aa13.66□□□□□ -0.22
SMG6-201ENST00000263073 FAM135AQ9P2D6 1515 aa13.66□□□□□ -0.22
SMG6-201ENST00000263073 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
SMG6-201ENST00000263073 CHRNA2Q15822 529 aa13.66□□□□□ -0.22
SMG6-201ENST00000263073 HELBQ8NG08 1087 aaPredicted RBP13.66□□□□□ -0.22
SMG6-201ENST00000263073 UIMC1Q96RL1 719 aa13.66□□□□□ -0.22
SMG6-201ENST00000263073 CBX8Q9HC52 389 aa13.66□□□□□ -0.22
SMG6-201ENST00000263073 PAG1Q9NWQ8 432 aa13.66□□□□□ -0.22
SMG6-201ENST00000263073 HS1BP3Q53T59 392 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 SYNCQ9H7C4 482 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 ADAMTS2O95450 1211 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 PICALMQ13492 652 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 CALM1P0DP23 149 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 CALM2P0DP24 149 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 CALM3P0DP25 149 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 ARL1P40616 181 aaPredicted RBP13.65□□□□□ -0.22
SMG6-201ENST00000263073 KRT83P78385 493 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 TFCP2Q12800 502 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 ZNF174Q15697 407 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 AFAP1L1Q8TED9 768 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 CABP5Q9NP86 173 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 RASAL2Q9UJF2 1139 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms