RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 COPRSQ9NQ92 184 aa21.01■□□□□ 0.95
TRAF4-201ENST00000262395 KMT5BQ4FZB7 885 aa21.01■□□□□ 0.95
TRAF4-201ENST00000262395 NFAT5O94916 1531 aa21.01■□□□□ 0.95
TRAF4-201ENST00000262395 FAM160A1Q05DH4 1040 aa21.01■□□□□ 0.95
TRAF4-201ENST00000262395 ENGASEQ8NFI3 743 aa21.01■□□□□ 0.95
TRAF4-201ENST00000262395 PCDHA7Q9UN72 937 aa21.01■□□□□ 0.95
TRAF4-201ENST00000262395 LMBR1LQ6UX01 489 aa21■□□□□ 0.95
TRAF4-201ENST00000262395 ARHGEF25Q86VW2 580 aa21■□□□□ 0.95
TRAF4-201ENST00000262395 HAUS7Q99871 368 aa21■□□□□ 0.95
TRAF4-201ENST00000262395 ANO10Q9NW15 660 aa21■□□□□ 0.95
TRAF4-201ENST00000262395 SMC2O95347 1197 aa21■□□□□ 0.95
TRAF4-201ENST00000262395 CEP57L1Q8IYX8 460 aa21■□□□□ 0.95
TRAF4-201ENST00000262395 KIF18AQ8NI77 898 aa21■□□□□ 0.95
TRAF4-201ENST00000262395 BBXQ8WY36 941 aaPredicted RBP21■□□□□ 0.95
TRAF4-201ENST00000262395 DDX41Q9UJV9 622 aaKnown RBP21■□□□□ 0.95
TRAF4-201ENST00000262395 RBM6P78332 1123 aaKnown RBP20.99■□□□□ 0.95
TRAF4-201ENST00000262395 CTAGE5O15320 804 aa20.99■□□□□ 0.95
TRAF4-201ENST00000262395 NDUFA8P51970 172 aa20.99■□□□□ 0.95
TRAF4-201ENST00000262395 HAND2P61296 217 aa20.99■□□□□ 0.95
TRAF4-201ENST00000262395 DPCR1Q3MIW9 517 aa20.99■□□□□ 0.95
TRAF4-201ENST00000262395 NAA16Q6N069 864 aaPredicted RBP20.99■□□□□ 0.95
TRAF4-201ENST00000262395 NYAP1Q6ZVC0 841 aa20.99■□□□□ 0.95
TRAF4-201ENST00000262395 CCAR2Q8N163 923 aaKnown RBP20.99■□□□□ 0.95
TRAF4-201ENST00000262395 LMO7Q8WWI1 1683 aa20.99■□□□□ 0.95
TRAF4-201ENST00000262395 SLIT1O75093 1534 aa20.98■□□□□ 0.95
TRAF4-201ENST00000262395 E7EWF7 191 aa20.98■□□□□ 0.95
TRAF4-201ENST00000262395 CAVIN2O95810 425 aa20.98■□□□□ 0.95
TRAF4-201ENST00000262395 KBTBD3Q8NAB2 608 aa20.98■□□□□ 0.95
TRAF4-201ENST00000262395 ZNF396Q96N95 335 aaPredicted RBP20.98■□□□□ 0.95
TRAF4-201ENST00000262395 PDIA3P30101 505 aaKnown RBP20.98■□□□□ 0.95
TRAF4-201ENST00000262395 NBPF11Q86T75 865 aa20.98■□□□□ 0.95
TRAF4-201ENST00000262395 CLIC4Q9Y696 253 aa20.98■□□□□ 0.95
TRAF4-201ENST00000262395 SF3A1Q15459 793 aaKnown RBP20.98■□□□□ 0.95
TRAF4-201ENST00000262395 ST7Q9NRC1 585 aa20.98■□□□□ 0.95
TRAF4-201ENST00000262395 PTPN21Q16825 1174 aa20.97■□□□□ 0.95
TRAF4-201ENST00000262395 FBXO38Q6PIJ6 1188 aa20.97■□□□□ 0.95
TRAF4-201ENST00000262395 TMC6Q7Z403 805 aa20.97■□□□□ 0.95
TRAF4-201ENST00000262395 LRRN4CLQ8ND94 238 aa20.97■□□□□ 0.95
TRAF4-201ENST00000262395 LLPHQ9BRT6 129 aaKnown RBP20.97■□□□□ 0.95
TRAF4-201ENST00000262395 NLRP2Q9NX02 1062 aa20.97■□□□□ 0.95
TRAF4-201ENST00000262395 KIF20AO95235 890 aa20.97■□□□□ 0.95
TRAF4-201ENST00000262395 SYCP1Q15431 976 aa20.97■□□□□ 0.95
TRAF4-201ENST00000262395 HSP90AB3PQ58FF7 597 aa20.97■□□□□ 0.95
TRAF4-201ENST00000262395 PAG1Q9NWQ8 432 aa20.97■□□□□ 0.95
TRAF4-201ENST00000262395 IFNKQ9P0W0 207 aa20.97■□□□□ 0.95
TRAF4-201ENST00000262395 ARHGAP23Q9P227 1491 aa20.96■□□□□ 0.95
TRAF4-201ENST00000262395 ZNF594Q96JF6 807 aaPredicted RBP20.96■□□□□ 0.95
TRAF4-201ENST00000262395 XPO4Q9C0E2 1151 aaKnown RBP20.96■□□□□ 0.95
TRAF4-201ENST00000262395 HSPD1P10809 573 aaKnown RBP20.96■□□□□ 0.95
TRAF4-201ENST00000262395 FDPSP14324 419 aaKnown RBP20.96■□□□□ 0.95
TRAF4-201ENST00000262395 EXOSC10Q01780 885 aaKnown RBP20.96■□□□□ 0.95
TRAF4-201ENST00000262395 ZRSR1Q15695 479 aaKnown RBP20.96■□□□□ 0.95
TRAF4-201ENST00000262395 MRPS27Q92552 414 aaKnown RBP20.96■□□□□ 0.95
TRAF4-201ENST00000262395 FMR1NBQ8N0W7 255 aaPredicted RBP20.95■□□□□ 0.94
TRAF4-201ENST00000262395 GORABQ5T7V8 394 aa20.95■□□□□ 0.94
TRAF4-201ENST00000262395 SLC52A2Q9HAB3 445 aa20.95■□□□□ 0.94
TRAF4-201ENST00000262395 NEMFO60524 1076 aa20.94■□□□□ 0.94
TRAF4-201ENST00000262395 STK38Q15208 465 aa20.94■□□□□ 0.94
TRAF4-201ENST00000262395 SYT10Q6XYQ8 523 aa20.94■□□□□ 0.94
TRAF4-201ENST00000262395 CARMIL3Q8ND23 1372 aa20.94■□□□□ 0.94
TRAF4-201ENST00000262395 HMGB1P09429 215 aaKnown RBP20.94■□□□□ 0.94
TRAF4-201ENST00000262395 ZNF397Q8NF99 534 aaPredicted RBP20.94■□□□□ 0.94
TRAF4-201ENST00000262395 E4F1Q66K89 784 aaPredicted RBP20.93■□□□□ 0.94
TRAF4-201ENST00000262395 RAPGEF4Q8WZA2 1011 aa20.93■□□□□ 0.94
TRAF4-201ENST00000262395 ERCC6LQ2NKX8 1250 aa20.93■□□□□ 0.94
TRAF4-201ENST00000262395 ARMCX5Q6P1M9 558 aa20.93■□□□□ 0.94
TRAF4-201ENST00000262395 NAT10Q9H0A0 1025 aaKnown RBP20.93■□□□□ 0.94
TRAF4-201ENST00000262395 MORC2Q9Y6X9 1032 aaPredicted RBP20.93■□□□□ 0.94
TRAF4-201ENST00000262395 NCAPD2Q15021 1401 aa20.92■□□□□ 0.94
TRAF4-201ENST00000262395 LMOD1P29536 600 aaPredicted RBP20.92■□□□□ 0.94
TRAF4-201ENST00000262395 FKBP4Q02790 459 aaKnown RBP eCLIP20.92■□□□□ 0.94
TRAF4-201ENST00000262395 LRRC24Q50LG9 513 aa20.92■□□□□ 0.94
TRAF4-201ENST00000262395 MAST3O60307 1309 aa20.92■□□□□ 0.94
TRAF4-201ENST00000262395 ERBB3P21860 1342 aa20.92■□□□□ 0.94
TRAF4-201ENST00000262395 M0R2C6 588 aa20.92■□□□□ 0.94
TRAF4-201ENST00000262395 TTC5Q8N0Z6 440 aa20.92■□□□□ 0.94
TRAF4-201ENST00000262395 SLFN14P0C7P3 912 aa20.91■□□□□ 0.94
TRAF4-201ENST00000262395 KIAA1468Q9P260 1216 aa20.91■□□□□ 0.94
TRAF4-201ENST00000262395 SLU7O95391 586 aaKnown RBP20.91■□□□□ 0.94
TRAF4-201ENST00000262395 GOLGA8FQ08AF8 430 aa20.91■□□□□ 0.94
TRAF4-201ENST00000262395 GOLGA8DPQ0D2H9 430 aa20.91■□□□□ 0.94
TRAF4-201ENST00000262395 SH3TC1Q8TE82 1336 aa20.91■□□□□ 0.94
TRAF4-201ENST00000262395 SALL1Q9NSC2 1324 aa20.91■□□□□ 0.94
TRAF4-201ENST00000262395 MARCKSP29966 332 aaPredicted RBP20.91■□□□□ 0.94
TRAF4-201ENST00000262395 LINC00301Q8NCQ3 95 aa20.91■□□□□ 0.94
TRAF4-201ENST00000262395 IFIT1P09914 478 aaKnown RBP20.9■□□□□ 0.94
TRAF4-201ENST00000262395 RABL6Q3YEC7 729 aaPredicted RBP20.9■□□□□ 0.94
TRAF4-201ENST00000262395 ATG9AQ7Z3C6 839 aa20.9■□□□□ 0.94
TRAF4-201ENST00000262395 LRP10Q7Z4F1 713 aa20.9■□□□□ 0.94
TRAF4-201ENST00000262395 KRT222Q8N1A0 295 aa20.9■□□□□ 0.94
TRAF4-201ENST00000262395 ERO1AQ96HE7 468 aa20.9■□□□□ 0.94
TRAF4-201ENST00000262395 PPP1R13BQ96KQ4 1090 aa20.9■□□□□ 0.94
TRAF4-201ENST00000262395 CCDC85AQ96PX6 553 aaPredicted RBP20.9■□□□□ 0.94
TRAF4-201ENST00000262395 ATP1A3P13637 1013 aa20.9■□□□□ 0.94
TRAF4-201ENST00000262395 LAMA4Q16363 1823 aa20.9■□□□□ 0.94
TRAF4-201ENST00000262395 ZMYM1Q5SVZ6 1142 aa20.9■□□□□ 0.94
TRAF4-201ENST00000262395 ADALQ6DHV7 355 aa20.9■□□□□ 0.94
TRAF4-201ENST00000262395 C8orf76Q96K31 380 aa20.9■□□□□ 0.94
TRAF4-201ENST00000262395 MRC1P22897 1456 aa20.89■□□□□ 0.94
TRAF4-201ENST00000262395 WASHC4Q2M389 1173 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms