RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 MPHOSPH8Q99549 860 aa16.18■□□□□ 0.18
VMP1-201ENST00000262291 LMBRD1Q9NUN5 540 aa16.18■□□□□ 0.18
VMP1-201ENST00000262291 MYH3P11055 1940 aa16.18■□□□□ 0.18
VMP1-201ENST00000262291 PPFIA3O75145 1194 aa16.18■□□□□ 0.18
VMP1-201ENST00000262291 HSPD1P10809 573 aaKnown RBP16.18■□□□□ 0.18
VMP1-201ENST00000262291 PSMA5P28066 241 aa16.18■□□□□ 0.18
VMP1-201ENST00000262291 GJB2P29033 226 aa16.18■□□□□ 0.18
VMP1-201ENST00000262291 TOB2Q14106 344 aaPredicted RBP16.18■□□□□ 0.18
VMP1-201ENST00000262291 PUS7LQ9H0K6 701 aaKnown RBP16.18■□□□□ 0.18
VMP1-201ENST00000262291 RBM27Q9P2N5 1060 aaKnown RBP16.18■□□□□ 0.18
VMP1-201ENST00000262291 IQSEC3Q9UPP2 1182 aaPredicted RBP16.18■□□□□ 0.18
VMP1-201ENST00000262291 IDH1O75874 414 aaKnown RBP16.17■□□□□ 0.18
VMP1-201ENST00000262291 RBM10P98175 930 aaKnown RBP16.17■□□□□ 0.18
VMP1-201ENST00000262291 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
VMP1-201ENST00000262291 CLEC17AQ6ZS10 378 aa16.17■□□□□ 0.18
VMP1-201ENST00000262291 NEK1Q96PY6 1258 aa16.17■□□□□ 0.18
VMP1-201ENST00000262291 PIH1D3Q9NQM4 214 aaKnown RBP16.17■□□□□ 0.18
VMP1-201ENST00000262291 NSFL1CQ9UNZ2 370 aaKnown RBP16.17■□□□□ 0.18
VMP1-201ENST00000262291 U3KPZ7 1027 aaPredicted RBP16.17■□□□□ 0.18
VMP1-201ENST00000262291 GNPATO15228 680 aa16.17■□□□□ 0.18
VMP1-201ENST00000262291 PHF14O94880 888 aa16.17■□□□□ 0.18
VMP1-201ENST00000262291 TBC1D9BQ66K14 1250 aa16.17■□□□□ 0.18
VMP1-201ENST00000262291 CCDC102BQ68D86 513 aa16.17■□□□□ 0.18
VMP1-201ENST00000262291 HELLSQ9NRZ9 838 aa16.17■□□□□ 0.18
VMP1-201ENST00000262291 FBXO3Q9UK99 471 aa16.17■□□□□ 0.18
VMP1-201ENST00000262291 COL4A1P02462 1669 aa16.16■□□□□ 0.18
VMP1-201ENST00000262291 SYT1P21579 422 aa16.16■□□□□ 0.18
VMP1-201ENST00000262291 GTF2E1P29083 439 aaPredicted RBP16.16■□□□□ 0.18
VMP1-201ENST00000262291 CAVIN1Q6NZI2 390 aaKnown RBP16.16■□□□□ 0.18
VMP1-201ENST00000262291 Q6ZUG5 572 aa16.16■□□□□ 0.18
VMP1-201ENST00000262291 GAS2L3Q86XJ1 694 aa16.16■□□□□ 0.18
VMP1-201ENST00000262291 ARID3AQ99856 593 aa16.16■□□□□ 0.18
VMP1-201ENST00000262291 AFF2P51816 1311 aa16.15■□□□□ 0.18
VMP1-201ENST00000262291 HMG20BQ9P0W2 317 aa16.15■□□□□ 0.18
VMP1-201ENST00000262291 CCNL1Q9UK58 526 aaPredicted RBP16.15■□□□□ 0.18
VMP1-201ENST00000262291 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
VMP1-201ENST00000262291 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
VMP1-201ENST00000262291 FGD1P98174 961 aa16.15■□□□□ 0.18
VMP1-201ENST00000262291 PARP10Q53GL7 1025 aa16.15■□□□□ 0.18
VMP1-201ENST00000262291 GPT2Q8TD30 523 aa16.15■□□□□ 0.18
VMP1-201ENST00000262291 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.15■□□□□ 0.18
VMP1-201ENST00000262291 BCAMP50895 628 aa16.14■□□□□ 0.17
VMP1-201ENST00000262291 CCDC152Q4G0S7 254 aa16.14■□□□□ 0.17
VMP1-201ENST00000262291 BCL2L12Q9HB09 334 aa16.14■□□□□ 0.17
VMP1-201ENST00000262291 RFX7Q2KHR2 1363 aa16.14■□□□□ 0.17
VMP1-201ENST00000262291 VPS37CA5D8V6 355 aaPredicted RBP16.14■□□□□ 0.17
VMP1-201ENST00000262291 FOXP2O15409 715 aa16.14■□□□□ 0.17
VMP1-201ENST00000262291 PUM3Q15397 648 aaKnown RBP16.14■□□□□ 0.17
VMP1-201ENST00000262291 SLC9C2Q5TAH2 1124 aa16.14■□□□□ 0.17
VMP1-201ENST00000262291 GJD4Q96KN9 370 aaPredicted RBP16.14■□□□□ 0.17
VMP1-201ENST00000262291 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
VMP1-201ENST00000262291 ZNF652Q9Y2D9 606 aa16.14■□□□□ 0.17
VMP1-201ENST00000262291 TAF1P21675 1872 aa16.14■□□□□ 0.17
VMP1-201ENST00000262291 FOSBP53539 338 aa16.13■□□□□ 0.17
VMP1-201ENST00000262291 CERKQ8TCT0 537 aa16.13■□□□□ 0.17
VMP1-201ENST00000262291 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.13■□□□□ 0.17
VMP1-201ENST00000262291 BRF1Q92994 677 aa16.13■□□□□ 0.17
VMP1-201ENST00000262291 GRPEL1Q9HAV7 217 aa16.13■□□□□ 0.17
VMP1-201ENST00000262291 STX6O43752 255 aa16.13■□□□□ 0.17
VMP1-201ENST00000262291 IGHMBP2P38935 993 aaKnown RBP16.13■□□□□ 0.17
VMP1-201ENST00000262291 TRIM44Q96DX7 344 aaPredicted RBP16.13■□□□□ 0.17
VMP1-201ENST00000262291 PDCL3Q9H2J4 239 aa16.13■□□□□ 0.17
VMP1-201ENST00000262291 GPHNQ9NQX3 736 aaPredicted RBP16.13■□□□□ 0.17
VMP1-201ENST00000262291 SPEF2Q9C093 1822 aa16.13■□□□□ 0.17
VMP1-201ENST00000262291 MYO5AQ9Y4I1 1855 aaKnown RBP16.12■□□□□ 0.17
VMP1-201ENST00000262291 MRE11P49959 708 aa16.12■□□□□ 0.17
VMP1-201ENST00000262291 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
VMP1-201ENST00000262291 SLC51AQ86UW1 340 aa16.12■□□□□ 0.17
VMP1-201ENST00000262291 LPIN2Q92539 896 aa16.12■□□□□ 0.17
VMP1-201ENST00000262291 ZSCAN31Q96LW9 406 aaPredicted RBP16.12■□□□□ 0.17
VMP1-201ENST00000262291 JAK2O60674 1132 aa16.12■□□□□ 0.17
VMP1-201ENST00000262291 CHRNDQ07001 517 aa16.12■□□□□ 0.17
VMP1-201ENST00000262291 FERMT3Q86UX7 667 aa16.12■□□□□ 0.17
VMP1-201ENST00000262291 CNPY2Q9Y2B0 182 aa16.12■□□□□ 0.17
VMP1-201ENST00000262291 MROH5Q6ZUA9 1318 aa16.12■□□□□ 0.17
VMP1-201ENST00000262291 WDR33Q9C0J8 1336 aaKnown RBP16.12■□□□□ 0.17
VMP1-201ENST00000262291 E7EWF7 191 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 GPAA1O43292 621 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 GADD45BO75293 160 aaPredicted RBP16.11■□□□□ 0.17
VMP1-201ENST00000262291 FGFR2P21802 821 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 RASGRF1Q13972 1273 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 TSGA10IPQ3SY00 556 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
VMP1-201ENST00000262291 DSCC1Q9BVC3 393 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 SH2B1Q9NRF2 756 aaPredicted RBP16.11■□□□□ 0.17
VMP1-201ENST00000262291 ZSCAN22P10073 491 aaPredicted RBP16.11■□□□□ 0.17
VMP1-201ENST00000262291 SLC5A1P13866 664 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 KRT32Q14532 448 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 RAB11FIP4Q86YS3 637 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 SEPT12Q8IYM1 358 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 DENND2AQ9ULE3 1009 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 SPATA31A6Q5VVP1 1343 aa16.11■□□□□ 0.17
VMP1-201ENST00000262291 ABCC12Q96J65 1359 aa16.1■□□□□ 0.17
VMP1-201ENST00000262291 ZNF532Q9HCE3 1301 aa16.1■□□□□ 0.17
VMP1-201ENST00000262291 FAM173BQ6P4H8 233 aa16.1■□□□□ 0.17
VMP1-201ENST00000262291 APPBP2Q92624 585 aa16.1■□□□□ 0.17
VMP1-201ENST00000262291 PRDM4Q9UKN5 801 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms