RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 PDCD2Q16342 344 aaPredicted RBP12.15□□□□□ -0.46
KPNA3-201ENST00000261667 TSNAXIP1Q2TAA8 658 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 ZNF710Q8N1W2 664 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 GBP5Q96PP8 586 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 FAN1Q9Y2M0 1017 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 CEP104O60308 925 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 POLD1P28340 1107 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 DNM1Q05193 864 aaKnown RBP12.15□□□□□ -0.46
KPNA3-201ENST00000261667 CKAP4Q07065 602 aaKnown RBP12.15□□□□□ -0.46
KPNA3-201ENST00000261667 ANKRD1Q15327 319 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 MAP7D1Q3KQU3 841 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 FAM204AQ9H8W3 233 aa12.15□□□□□ -0.46
KPNA3-201ENST00000261667 IBTKQ9P2D0 1353 aaPredicted RBP12.15□□□□□ -0.46
KPNA3-201ENST00000261667 PPFIA4O75335 1185 aa12.15□□□□□ -0.47
KPNA3-201ENST00000261667 STIM1Q13586 685 aa12.15□□□□□ -0.47
KPNA3-201ENST00000261667 CCDC158Q5M9N0 1113 aa12.15□□□□□ -0.47
KPNA3-201ENST00000261667 MAGEC2Q9UBF1 373 aaPredicted RBP12.15□□□□□ -0.47
KPNA3-201ENST00000261667 LIMCH1Q9UPQ0 1083 aa12.15□□□□□ -0.47
KPNA3-201ENST00000261667 FSIP1Q8NA03 581 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 TESK2Q96S53 571 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 SAFBQ15424 915 aaKnown RBP eCLIP12.14□□□□□ -0.47
KPNA3-201ENST00000261667 PPFIBP2Q8ND30 876 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 SMARCC2Q8TAQ2 1214 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 MED4Q9NPJ6 270 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.14□□□□□ -0.47
KPNA3-201ENST00000261667 RPGRIP1LQ68CZ1 1315 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 SCAF11Q99590 1463 aaKnown RBP12.14□□□□□ -0.47
KPNA3-201ENST00000261667 EFCAB8A8MWE9 144 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 CREB3O43889 395 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 CAND2O75155 1236 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 SEMA3FQ13275 785 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 PPP1R7Q15435 360 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 NBPF9Q3BBW0 867 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 RASIP1Q5U651 963 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 FAM71BQ8TC56 605 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 GPT2Q8TD30 523 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 TAF4BQ92750 862 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 PDLIM2Q96JY6 352 aa12.14□□□□□ -0.47
KPNA3-201ENST00000261667 NSRP1Q9H0G5 558 aaKnown RBP12.14□□□□□ -0.47
KPNA3-201ENST00000261667 LUC7L3O95232 432 aaKnown RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 GJB2P29033 226 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 PDE1CQ14123 709 aaPredicted RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 ZNF569Q5MCW4 686 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 BICC1Q9H694 974 aaKnown RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 LUC7LQ9NQ29 371 aaKnown RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 USH1CQ9Y6N9 552 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 ERVK-7P63135 1459 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 TRAF1Q13077 416 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 ABTB1Q969K4 478 aaPredicted RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 CEP63Q96MT8 703 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 IFNKQ9P0W0 207 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 GOLGA6BA6NDN3 693 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 SLC3A2P08195 630 aaKnown RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 UBE4AQ14139 1066 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 CCDC92Q53HC0 331 aaPredicted RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 ARHGEF28Q8N1W1 1705 aaKnown RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 GADD45BO75293 160 aaPredicted RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 DESP17661 470 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 HPDP32754 393 aaPredicted RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 GNPTABQ3T906 1256 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 CFAP58Q5T655 872 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 SPATS2Q86XZ4 545 aaKnown RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 CCDC170Q8IYT3 715 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 NAA15Q9BXJ9 866 aaKnown RBP12.13□□□□□ -0.47
KPNA3-201ENST00000261667 SAMM50Q9Y512 469 aa12.13□□□□□ -0.47
KPNA3-201ENST00000261667 NKTRP30414 1462 aaKnown RBP12.12□□□□□ -0.47
KPNA3-201ENST00000261667 HDAC1Q13547 482 aaPredicted RBP12.12□□□□□ -0.47
KPNA3-201ENST00000261667 BLOC1S2Q6QNY1 142 aa12.12□□□□□ -0.47
KPNA3-201ENST00000261667 ZFYVE9O95405 1425 aa12.12□□□□□ -0.47
KPNA3-201ENST00000261667 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
KPNA3-201ENST00000261667 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
KPNA3-201ENST00000261667 ACTN3Q08043 901 aaPredicted RBP12.12□□□□□ -0.47
KPNA3-201ENST00000261667 MAP7Q14244 749 aa12.12□□□□□ -0.47
KPNA3-201ENST00000261667 MPHOSPH8Q99549 860 aa12.12□□□□□ -0.47
KPNA3-201ENST00000261667 CAPS2Q9BXY5 557 aa12.12□□□□□ -0.47
KPNA3-201ENST00000261667 ASXL1Q8IXJ9 1541 aa12.12□□□□□ -0.47
KPNA3-201ENST00000261667 GDAP1L1Q96MZ0 367 aa12.12□□□□□ -0.47
KPNA3-201ENST00000261667 SAMD15Q9P1V8 674 aa12.12□□□□□ -0.47
KPNA3-201ENST00000261667 CLTAP09496 248 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 RNF217Q8TC41 542 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 MORC4Q8TE76 937 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 ANKRD7Q92527 254 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 SIL1Q9H173 461 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 CBX8Q9HC52 389 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 CHCHD3Q9NX63 227 aaKnown RBP12.11□□□□□ -0.47
KPNA3-201ENST00000261667 BIN2Q9UBW5 565 aaPredicted RBP12.11□□□□□ -0.47
KPNA3-201ENST00000261667 GCOM1H8Y6P7 765 aaPredicted RBP12.11□□□□□ -0.47
KPNA3-201ENST00000261667 MYZAPP0CAP1 466 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 RFC1P35251 1148 aaPredicted RBP12.11□□□□□ -0.47
KPNA3-201ENST00000261667 PPARDQ03181 441 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 SPA17Q15506 151 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 CTNNBL1Q8WYA6 563 aaPredicted RBP12.11□□□□□ -0.47
KPNA3-201ENST00000261667 NUP88Q99567 741 aaPredicted RBP12.11□□□□□ -0.47
KPNA3-201ENST00000261667 TRAK1Q9UPV9 953 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 F13A1P00488 732 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 PSMC4P43686 418 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 PPFIA1Q13136 1202 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 CAPZA3Q96KX2 299 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 IFT74Q96LB3 600 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms