RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 RSPH14Q9UHP6 348 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 DBNLQ9UJU6 430 aaKnown RBP11.67□□□□□ -0.54
PALB2-201ENST00000261584 JAG2Q9Y219 1238 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 CCT6AP40227 531 aaKnown RBP11.66□□□□□ -0.54
PALB2-201ENST00000261584 FAM160A1Q05DH4 1040 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 KRBA2Q6ZNG9 492 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 AIDAQ96BJ3 306 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 PRDM4Q9UKN5 801 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 PCDHA7Q9UN72 937 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 GOLGA8AA7E2F4 631 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 METAP2P50579 478 aaKnown RBP eCLIP11.66□□□□□ -0.54
PALB2-201ENST00000261584 FANCCQ00597 558 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 KMT5BQ4FZB7 885 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 GRAMD1CQ8IYS0 662 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 TTC14Q96N46 770 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 IQSEC2Q5JU85 1478 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 ATP10DQ9P241 1426 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 EPB41L2O43491 1005 aaKnown RBP11.66□□□□□ -0.54
PALB2-201ENST00000261584 ZNF202O95125 648 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 IPO7O95373 1038 aaKnown RBP11.66□□□□□ -0.54
PALB2-201ENST00000261584 TNNI3KQ59H18 835 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 CCDC191Q8NCU4 936 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 DHX58Q96C10 678 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 FAM89AQ96GI7 184 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 FAM107BQ9H098 131 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 GOLPH3LQ9H4A5 285 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 HOOK1Q9UJC3 728 aaKnown RBP11.66□□□□□ -0.54
PALB2-201ENST00000261584 KCNJ14Q9UNX9 436 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 FPGT-TNNI3KV9GXZ4 949 aa11.66□□□□□ -0.54
PALB2-201ENST00000261584 B4E1Z4 1266 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 A1BGP04217 495 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 TAF3Q5VWG9 929 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 INCENPQ9NQS7 918 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 CTAGE5O15320 804 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 JAKMIP3Q5VZ66 844 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 PROSER2Q86WR7 435 aaPredicted RBP11.65□□□□□ -0.54
PALB2-201ENST00000261584 JMYQ8N9B5 988 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 MIGA1Q8NAN2 632 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 IPO4Q8TEX9 1081 aaKnown RBP11.65□□□□□ -0.54
PALB2-201ENST00000261584 ZNF496Q96IT1 587 aaPredicted RBP11.65□□□□□ -0.54
PALB2-201ENST00000261584 UIMC1Q96RL1 719 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 EDC4Q6P2E9 1401 aaKnown RBP11.65□□□□□ -0.54
PALB2-201ENST00000261584 MARCH6O60337 910 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 TAF5LO75529 589 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 IARSP41252 1262 aaKnown RBP11.65□□□□□ -0.54
PALB2-201ENST00000261584 GSDMDP57764 484 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 TMEM67Q5HYA8 995 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 MAP4K1Q92918 833 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 PSMB7Q99436 277 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 FEZ1Q99689 392 aa11.65□□□□□ -0.54
PALB2-201ENST00000261584 E9PCH4 1651 aa11.65□□□□□ -0.55
PALB2-201ENST00000261584 LRRC24Q50LG9 513 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 SLC9C2Q5TAH2 1124 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 NUP88Q99567 741 aaPredicted RBP11.64□□□□□ -0.55
PALB2-201ENST00000261584 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 TOB2Q14106 344 aaPredicted RBP11.64□□□□□ -0.55
PALB2-201ENST00000261584 NECTIN1Q15223 517 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 WWC2Q6AWC2 1192 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 LDHAL6AQ6ZMR3 332 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 BICDL1Q6ZP65 573 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 GPATCH11Q8N954 259 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 PREX2Q70Z35 1606 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 ERO1AQ96HE7 468 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 AK7Q96M32 723 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 PUS3Q9BZE2 481 aaKnown RBP11.64□□□□□ -0.55
PALB2-201ENST00000261584 RANBP6O60518 1105 aaKnown RBP11.64□□□□□ -0.55
PALB2-201ENST00000261584 CAPN2P17655 700 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 MRPS25P82663 173 aaKnown RBP11.64□□□□□ -0.55
PALB2-201ENST00000261584 ZNF569Q5MCW4 686 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 CCDC102BQ68D86 513 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 ARFGAP3Q9NP61 516 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 FANCLQ9NW38 375 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 CALCOCO1Q9P1Z2 691 aa11.64□□□□□ -0.55
PALB2-201ENST00000261584 ABCA6Q8N139 1617 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 H0YHG0 523 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 RNMTO43148 476 aaKnown RBP11.63□□□□□ -0.55
PALB2-201ENST00000261584 KIF20AO95235 890 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 TRIM22Q8IYM9 498 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 NAPBQ9H115 298 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 E7EWF7 191 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 PRDM1O75626 825 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 LRRN4CLQ8ND94 238 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 LRP2BPQ9P2M1 347 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 SLC12A7Q9Y666 1083 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 UHRF1BP1LA0JNW5 1464 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 A0A1B0GUL7 405 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 CASP1P29466 404 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 FILIP1LQ4L180 1135 aa11.63□□□□□ -0.55
PALB2-201ENST00000261584 TULP4Q9NRJ4 1543 aa11.62□□□□□ -0.55
PALB2-201ENST00000261584 SNAP23O00161 211 aa11.62□□□□□ -0.55
PALB2-201ENST00000261584 ZSCAN12O43309 604 aa11.62□□□□□ -0.55
PALB2-201ENST00000261584 CBFA2T2O43439 604 aa11.62□□□□□ -0.55
PALB2-201ENST00000261584 OAS2P29728 719 aaKnown RBP11.62□□□□□ -0.55
PALB2-201ENST00000261584 LRRFIP1Q32MZ4 808 aaKnown RBP11.62□□□□□ -0.55
PALB2-201ENST00000261584 SMYD4Q8IYR2 804 aaPredicted RBP11.62□□□□□ -0.55
PALB2-201ENST00000261584 POLR2DO15514 142 aaKnown RBP11.62□□□□□ -0.55
PALB2-201ENST00000261584 ZMYND10O75800 440 aa11.62□□□□□ -0.55
PALB2-201ENST00000261584 ANKRD20A12PQ8NF67 263 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms