RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CCDC8Q9H0W5 538 aaPredicted RBP22.73■■□□□ 1.23
COL4A3BP-201ENST00000261415 GPR108Q9NPR9 543 aa22.73■■□□□ 1.23
COL4A3BP-201ENST00000261415 CEP126Q9P2H0 1117 aa22.73■■□□□ 1.23
COL4A3BP-201ENST00000261415 CIZ1Q9ULV3 898 aaPredicted RBP22.73■■□□□ 1.23
COL4A3BP-201ENST00000261415 AOX1Q06278 1338 aa22.73■■□□□ 1.23
COL4A3BP-201ENST00000261415 SASS6Q6UVJ0 657 aa22.73■■□□□ 1.23
COL4A3BP-201ENST00000261415 TLR7Q9NYK1 1049 aaKnown RBP22.73■■□□□ 1.23
COL4A3BP-201ENST00000261415 METTL24Q5JXM2 366 aa22.72■■□□□ 1.23
COL4A3BP-201ENST00000261415 ANKRD18AQ8IVF6 992 aa22.71■■□□□ 1.23
COL4A3BP-201ENST00000261415 TTC41PQ6P2S7 1318 aa22.71■■□□□ 1.23
COL4A3BP-201ENST00000261415 MROH5Q6ZUA9 1318 aa22.7■■□□□ 1.23
COL4A3BP-201ENST00000261415 CRY2Q49AN0 593 aa22.7■■□□□ 1.22
COL4A3BP-201ENST00000261415 HSCBQ8IWL3 235 aa22.7■■□□□ 1.22
COL4A3BP-201ENST00000261415 CELF1Q92879 486 aaKnown RBP22.7■■□□□ 1.22
COL4A3BP-201ENST00000261415 DBNLQ9UJU6 430 aaKnown RBP22.7■■□□□ 1.22
COL4A3BP-201ENST00000261415 DDX46Q7L014 1031 aaKnown RBP22.7■■□□□ 1.22
COL4A3BP-201ENST00000261415 VGLL2Q8N8G2 317 aa22.7■■□□□ 1.22
COL4A3BP-201ENST00000261415 PI4K2BQ8TCG2 481 aa22.7■■□□□ 1.22
COL4A3BP-201ENST00000261415 GPATCH3Q96I76 525 aa22.7■■□□□ 1.22
COL4A3BP-201ENST00000261415 ECHDC1Q9NTX5 307 aa22.69■■□□□ 1.22
COL4A3BP-201ENST00000261415 AKAP2Q9Y2D5 859 aa22.69■■□□□ 1.22
COL4A3BP-201ENST00000261415 A0A1B0GUL7 405 aa22.68■■□□□ 1.22
COL4A3BP-201ENST00000261415 PDE8BO95263 885 aa22.68■■□□□ 1.22
COL4A3BP-201ENST00000261415 DDIT3P35638 169 aa22.68■■□□□ 1.22
COL4A3BP-201ENST00000261415 TIMM10P62072 90 aa22.68■■□□□ 1.22
COL4A3BP-201ENST00000261415 SLC16A10Q8TF71 515 aa22.68■■□□□ 1.22
COL4A3BP-201ENST00000261415 RPGRQ92834 1020 aaKnown RBP22.68■■□□□ 1.22
COL4A3BP-201ENST00000261415 NEUROD6Q96NK8 337 aa22.68■■□□□ 1.22
COL4A3BP-201ENST00000261415 DBNDD2Q9BQY9 259 aa22.68■■□□□ 1.22
COL4A3BP-201ENST00000261415 BRIP1Q9BX63 1249 aa22.68■■□□□ 1.22
COL4A3BP-201ENST00000261415 BSDC1Q9NW68 430 aaPredicted RBP22.68■■□□□ 1.22
COL4A3BP-201ENST00000261415 KLRG2A4D1S0 409 aaPredicted RBP22.67■■□□□ 1.22
COL4A3BP-201ENST00000261415 RPS8P62241 208 aaKnown RBP22.67■■□□□ 1.22
COL4A3BP-201ENST00000261415 TMEM51Q9NW97 253 aa22.67■■□□□ 1.22
COL4A3BP-201ENST00000261415 ERC2O15083 957 aa22.66■■□□□ 1.22
COL4A3BP-201ENST00000261415 HELBQ8NG08 1087 aaPredicted RBP22.66■■□□□ 1.22
COL4A3BP-201ENST00000261415 GLRX3O76003 335 aaKnown RBP22.65■■□□□ 1.22
COL4A3BP-201ENST00000261415 SDSP20132 328 aa22.65■■□□□ 1.22
COL4A3BP-201ENST00000261415 ATP2B3Q16720 1220 aa22.65■■□□□ 1.22
COL4A3BP-201ENST00000261415 C22orf23Q9BZE7 217 aa22.65■■□□□ 1.22
COL4A3BP-201ENST00000261415 CHRNDQ07001 517 aa22.65■■□□□ 1.22
COL4A3BP-201ENST00000261415 GRAPQ13588 217 aa22.65■■□□□ 1.22
COL4A3BP-201ENST00000261415 GRAPLQ8TC17 118 aaPredicted RBP22.65■■□□□ 1.22
COL4A3BP-201ENST00000261415 TNPO1Q92973 898 aaKnown RBP22.65■■□□□ 1.22
COL4A3BP-201ENST00000261415 AKAP11Q9UKA4 1901 aa22.65■■□□□ 1.22
COL4A3BP-201ENST00000261415 KIF13BQ9NQT8 1826 aa22.65■■□□□ 1.22
COL4A3BP-201ENST00000261415 LRRC37AA6NMS7 1700 aa22.65■■□□□ 1.22
COL4A3BP-201ENST00000261415 DLEC1Q9Y238 1755 aa22.64■■□□□ 1.21
COL4A3BP-201ENST00000261415 TAF5LO75529 589 aa22.63■■□□□ 1.21
COL4A3BP-201ENST00000261415 PUM3Q15397 648 aaKnown RBP22.63■■□□□ 1.21
COL4A3BP-201ENST00000261415 RBM17Q96I25 401 aaKnown RBP22.63■■□□□ 1.21
COL4A3BP-201ENST00000261415 HOXA10P31260 410 aaPredicted RBP22.62■■□□□ 1.21
COL4A3BP-201ENST00000261415 XAGE2Q96GT9 111 aa22.62■■□□□ 1.21
COL4A3BP-201ENST00000261415 ARID3AQ99856 593 aa22.62■■□□□ 1.21
COL4A3BP-201ENST00000261415 MINPP1Q9UNW1 487 aa22.62■■□□□ 1.21
COL4A3BP-201ENST00000261415 ZKSCAN5Q9Y2L8 839 aa22.62■■□□□ 1.21
COL4A3BP-201ENST00000261415 MYH13Q9UKX3 1938 aa22.62■■□□□ 1.21
COL4A3BP-201ENST00000261415 PDE6BP35913 854 aa22.62■■□□□ 1.21
COL4A3BP-201ENST00000261415 TRIM6-TRIM34B2RNG4 842 aa22.61■■□□□ 1.21
COL4A3BP-201ENST00000261415 GOLGA6L22H0YM25 854 aa22.61■■□□□ 1.21
COL4A3BP-201ENST00000261415 FGFR2P21802 821 aa22.61■■□□□ 1.21
COL4A3BP-201ENST00000261415 ADORA1P30542 326 aa22.61■■□□□ 1.21
COL4A3BP-201ENST00000261415 R3HDM1Q15032 1099 aaKnown RBP22.61■■□□□ 1.21
COL4A3BP-201ENST00000261415 RAB3GAP1Q15042 981 aa22.61■■□□□ 1.21
COL4A3BP-201ENST00000261415 PDLIM2Q96JY6 352 aa22.61■■□□□ 1.21
COL4A3BP-201ENST00000261415 MAP4K4O95819 1239 aaPredicted RBP22.6■■□□□ 1.21
COL4A3BP-201ENST00000261415 SRGNP10124 158 aa22.6■■□□□ 1.21
COL4A3BP-201ENST00000261415 ATP5JP18859 108 aa22.6■■□□□ 1.21
COL4A3BP-201ENST00000261415 LPIN2Q92539 896 aa22.6■■□□□ 1.21
COL4A3BP-201ENST00000261415 MYH7P12883 1935 aa22.6■■□□□ 1.21
COL4A3BP-201ENST00000261415 RILPL2Q969X0 211 aa22.6■■□□□ 1.21
COL4A3BP-201ENST00000261415 CRAMP1Q96RY5 1269 aa22.6■■□□□ 1.21
COL4A3BP-201ENST00000261415 CDC45O75419 566 aa22.59■■□□□ 1.21
COL4A3BP-201ENST00000261415 BOLA2Q9H3K6 86 aa22.59■■□□□ 1.21
COL4A3BP-201ENST00000261415 MYO5AQ9Y4I1 1855 aaKnown RBP22.59■■□□□ 1.21
COL4A3BP-201ENST00000261415 SNAP23O00161 211 aa22.59■■□□□ 1.21
COL4A3BP-201ENST00000261415 GORABQ5T7V8 394 aa22.59■■□□□ 1.21
COL4A3BP-201ENST00000261415 SNX21Q969T3 373 aa22.59■■□□□ 1.21
COL4A3BP-201ENST00000261415 C10orf71Q711Q0 1435 aa22.59■■□□□ 1.21
COL4A3BP-201ENST00000261415 LTBP1Q14766 1721 aa22.58■■□□□ 1.21
COL4A3BP-201ENST00000261415 ZBTB7AO95365 584 aa22.58■■□□□ 1.21
COL4A3BP-201ENST00000261415 SLC5A1P13866 664 aa22.58■■□□□ 1.21
COL4A3BP-201ENST00000261415 KLHL40Q2TBA0 621 aa22.58■■□□□ 1.21
COL4A3BP-201ENST00000261415 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.58■■□□□ 1.21
COL4A3BP-201ENST00000261415 NPR1P16066 1061 aa22.57■■□□□ 1.2
COL4A3BP-201ENST00000261415 CCDC158Q5M9N0 1113 aa22.57■■□□□ 1.2
COL4A3BP-201ENST00000261415 TBC1D9Q6ZT07 1266 aa22.57■■□□□ 1.2
COL4A3BP-201ENST00000261415 ILDR2Q71H61 639 aa22.57■■□□□ 1.2
COL4A3BP-201ENST00000261415 CNTROBQ8N137 903 aa22.57■■□□□ 1.2
COL4A3BP-201ENST00000261415 ANKRD2Q9GZV1 360 aa22.57■■□□□ 1.2
COL4A3BP-201ENST00000261415 SLX4Q8IY92 1834 aa22.57■■□□□ 1.2
COL4A3BP-201ENST00000261415 ZNF445P59923 1031 aa22.56■■□□□ 1.2
COL4A3BP-201ENST00000261415 MTFR1LQ9H019 292 aa22.56■■□□□ 1.2
COL4A3BP-201ENST00000261415 BBOX1O75936 387 aa22.56■■□□□ 1.2
COL4A3BP-201ENST00000261415 IFIT1P09914 478 aaKnown RBP22.56■■□□□ 1.2
COL4A3BP-201ENST00000261415 RBM25P49756 843 aaKnown RBP22.56■■□□□ 1.2
COL4A3BP-201ENST00000261415 SLC51AQ86UW1 340 aa22.56■■□□□ 1.2
COL4A3BP-201ENST00000261415 MYRIPQ8NFW9 859 aa22.56■■□□□ 1.2
COL4A3BP-201ENST00000261415 MASTLQ96GX5 879 aa22.56■■□□□ 1.2
COL4A3BP-201ENST00000261415 UBE4AQ14139 1066 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms